NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS6608.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6608.2 Public Homo sapiens 9 ZCCHC7 24 110 108 CCDS HistoryNCBI Gene:84186Re-query CCDS DB by CCDS ID:6608.2Re-query CCDS DB by GeneID:84186See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 6608.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336755.10 ENSP00000337839.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000336755.10Link to Ensembl Protein Viewer:ENSP00000337839.5Re-query CCDS DB by Nucleotide ID:ENST00000336755Re-query CCDS DB by Protein ID:ENSP00000337839
Original member Current member EBI ENST00000534928.5 ENSP00000443113.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000534928.5Link to Ensembl Protein Viewer:ENSP00000443113.2Re-query CCDS DB by Nucleotide ID:ENST00000534928Re-query CCDS DB by Protein ID:ENSP00000443113
Original member Current member NCBI NM_001289119.2 NP_001276048.1 Accepted alive Link to Nucleotide Sequence:NM_001289119.2Link to Protein Sequence:NP_001276048.1Re-query CCDS DB by Nucleotide ID:NM_001289119Re-query CCDS DB by Protein ID:NP_001276048Link to BLAST:NP_001276048.1
Original member Current member NCBI NM_001289120.2 NP_001276049.1 Accepted alive Link to Nucleotide Sequence:NM_001289120.2Link to Protein Sequence:NP_001276049.1Re-query CCDS DB by Nucleotide ID:NM_001289120Re-query CCDS DB by Protein ID:NP_001276049Link to BLAST:NP_001276049.1
Original member Current member NCBI NM_001289121.2 NP_001276050.1 Accepted alive Link to Nucleotide Sequence:NM_001289121.2Link to Protein Sequence:NP_001276050.1Re-query CCDS DB by Nucleotide ID:NM_001289121Re-query CCDS DB by Protein ID:NP_001276050Link to BLAST:NP_001276050.1
Original member Current member NCBI NM_032226.3 NP_115602.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032226.3Link to Protein Sequence:NP_115602.2Re-query CCDS DB by Nucleotide ID:NM_032226Re-query CCDS DB by Protein ID:NP_115602Link to BLAST:NP_115602.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276048.1 543 Q8N3Z6-1 543 100% 0 0
NP_001276049.1 543 Q8N3Z6-1 543 100% 0 0
NP_001276050.1 543 Q8N3Z6-1 543 100% 0 0
NP_115602.2 543 Q8N3Z6-1 543 100% 0 0

Chromosomal Locations for CCDS 6608.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 37126333 37126942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37302188 37302231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37304188 37304313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37305544 37305714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37327799 37327834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37349357 37349452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37354710 37354824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 37356835 37357268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1632 nt):
ATGATGTTTGGTGGCTATGAGACTATAGAAGCATACGAAGATGATCTTTATCGAGATGAGTCATCTAGTG
AACTGAGTGTTGATAGTGAGGTGGAATTTCAACTCTATAGCCAAATTCATTATGCCCAAGATCTTGATGA
TGTCATCAGGGAGGAAGAGCATGAAGAAAAGAACTCTGGGAATTCGGAATCTTCGAGTAGTAAACCAAAT
CAGAAGAAGCTAATCGTCCTTTCAGATAGTGAGGTCATCCAGCTGTCAGATGGGTCAGAGGTCATCACTT
TGTCTGATGAAGACAGTATTTATAGATGTAAAGGAAAGAATGTTAGAGTTCAAGCACAAGAAAATGCCCA
TGGTCTTTCTTCTTCTCTTCAATCTAATGAGCTGGTTGATAAGAAATGCAAGAGTGATATTGAGAAGCCT
AAATCTGAAGAGAGATCAGGTGTAATCCGAGAGGTCATGATTATAGAGGTCAGTTCAAGTGAAGAGGAAG
AGAGCACCATTTCAGAAGGTGATAATGTGGAAAGCTGGATGCTACTGGGATGTGAAGTAGATGATAAAGA
TGATGATATCCTTCTCAACCTTGTGGGATGTGAAAACTCTGTTACTGAAGGAGAAGATGGTATAAACTGG
TCCATCAGTGACAAAGACATTGAGGCCCAGATAGCTAATAACCGAACACCTGGAAGATGGACCCAGCGGT
ACTATTCAGCCAACAAAAACATTATCTGTAGAAATTGTGACAAACGTGGTCATTTATCAAAAAACTGCCC
CTTACCACGAAAAGTTCGTCGCTGCTTCCTGTGCTCCAGGAGAGGACATCTCCTGTATTCCTGTCCAGCC
CCCCTTTGCGAATACTGTCCTGTGCCTAAGATGTTGGACCACTCATGTCTTTTCAGACATTCCTGGGATA
AACAGTGTGACCGATGTCATATGCTAGGCCACTATACAGATGCTTGCACAGAAATCTGGAGGCAGTATCA
CCTAACGACCAAACCTGGACCACCCAAAAAGCCGAAGACCCCTTCAAGACCATCAGCCTTAGCATATTGC
TATCACTGCGCGCAAAAAGGCCATTATGGACACGAATGTCCAGAAAGAGAAGTGTATGACCCGTCTCCAG
TATCTCCATTCATCTGCTACTATGATGACAAATATGAAATTCAGGAGAGAGAAAAGAGACTAAAACAAAA
AATAAAAGTACTCAAGAAAAATGGGGTTATCCCAGAGCCATCCAAGCTACCTTATATAAAAGCAGCAAAT
GAGAACCCCCACCATGATATAAGGAAGGGCCGTGCCTCATGGAAAAGCAACAGGTGGCCTCAAGAAAATA
AAGAAACACAAAAAGAAATGAAGAACAAGAATAGAAACTGGGAGAAGCACAGGAAGGCTGACAGACATCG
TGAAGTGGATGAGGATTTTCCCAGGGGCCCCAAAACCTACTCTTCTCCTGGCAGTTTTAAAACCCAGAAG
CCTTCTAAGCCCTTTCACCGTTCATCACATTACCACACGTCAAGAGAAGACAAGTCTCCCAAGGAAGGCA
AGAGGGGCAAGCAGAAGAAAAAGGAGAGGTGCTGGGAAGATGATGACAATGATAACTTATTTCTTATTAA
GCAGAGAAAAAAAAAGTCTTAA

Translation (543 aa):
MMFGGYETIEAYEDDLYRDESSSELSVDSEVEFQLYSQIHYAQDLDDVIREEEHEEKNSGNSESSSSKPN
QKKLIVLSDSEVIQLSDGSEVITLSDEDSIYRCKGKNVRVQAQENAHGLSSSLQSNELVDKKCKSDIEKP
KSEERSGVIREVMIIEVSSSEEEESTISEGDNVESWMLLGCEVDDKDDDILLNLVGCENSVTEGEDGINW
SISDKDIEAQIANNRTPGRWTQRYYSANKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPA
PLCEYCPVPKMLDHSCLFRHSWDKQCDRCHMLGHYTDACTEIWRQYHLTTKPGPPKKPKTPSRPSALAYC
YHCAQKGHYGHECPEREVYDPSPVSPFICYYDDKYEIQEREKRLKQKIKVLKKNGVIPEPSKLPYIKAAN
ENPHHDIRKGRASWKSNRWPQENKETQKEMKNKNRNWEKHRKADRHREVDEDFPRGPKTYSSPGSFKTQK
PSKPFHRSSHYHTSREDKSPKEGKRGKQKKKERCWEDDDNDNLFLIKQRKKKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH