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Report for CCDS75748.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75748.1 Public Homo sapiens 8 YTHDF3 24 110 108 CCDS HistoryNCBI Gene:253943Re-query CCDS DB by CCDS ID:75748.1Re-query CCDS DB by GeneID:253943See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75748.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000621413.4 ENSP00000478490.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000621413.4Link to Ensembl Protein Viewer:ENSP00000478490.1Re-query CCDS DB by Nucleotide ID:ENST00000621413Re-query CCDS DB by Protein ID:ENSP00000478490
Original member Current member EBI ENST00000621820.4 ENSP00000481476.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000621820.4Link to Ensembl Protein Viewer:ENSP00000481476.1Re-query CCDS DB by Nucleotide ID:ENST00000621820Re-query CCDS DB by Protein ID:ENSP00000481476
Original member Current member NCBI NM_001277813.2 NP_001264742.1 Accepted alive Link to Nucleotide Sequence:NM_001277813.2Link to Protein Sequence:NP_001264742.1Re-query CCDS DB by Nucleotide ID:NM_001277813Re-query CCDS DB by Protein ID:NP_001264742Link to BLAST:NP_001264742.1
Original member Current member NCBI NM_001277814.2 NP_001264743.1 Accepted alive Link to Nucleotide Sequence:NM_001277814.2Link to Protein Sequence:NP_001264743.1Re-query CCDS DB by Nucleotide ID:NM_001277814Re-query CCDS DB by Protein ID:NP_001264743Link to BLAST:NP_001264743.1

Chromosomal Locations for CCDS 75748.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 63172741 63172798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 63175331 63175416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 63186147 63187745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 63209683 63209706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1767 nt):
ATGTTCTATCTTGATTTGACTCTGTTTCATAGAGCAGAGGAAACAGGCGAAGAATCATTTTCAGTACAAA
ACGGTTCGATTCATCAAAAAGATGCTGTAAATGATGATGATTTTGAGCCATACTTAAGTAGCCAGACAAA
TCAGAGTAACAGCTATCCACCAATGTCAGATCCATACATGCCTAGTTACTATGCTCCATCCATTGGATTT
CCATATTCTCTTGGGGAAGCAGCGTGGTCCACAGCTGGAGACCAGCCTATGCCATATCTGACAACCTATG
GACAAATGAGTAATGGAGAACATCACTATATACCAGATGGTGTATTTAGTCAACCTGGGGCATTAGGAAA
TACCCCTCCATTTCTTGGTCAACATGGATTTAACTTTTTTCCTGGTAATGCTGATTTCTCTACATGGGGG
ACAAGTGGATCTCAGGGACAATCAACACAAAGTTCTGCTTATAGTAGCAGTTATGGCTATCCACCTAGTT
CTCTTGGGAGAGCTATTACTGATGGACAGGCTGGATTTGGCAATGATACTTTGAGTAAGGTGCCTGGCAT
TAGCAGTATTGAGCAAGGCATGACTGGACTGAAAATTGGTGGTGACCTGACAGCTGCAGTGACAAAAACT
GTAGGTACAGCTTTGAGCAGCAGTGGTATGACTAGCATTGCAACCAATAGTGTGCCCCCAGTTAGCAGTG
CAGCACCTAAACCAACCTCCTGGGCTGCCATTGCCAGAAAGCCTGCCAAACCTCAACCGAAACTTAAACC
CAAGGGCAATGTGGGAATTGGGGGTTCTGCTGTACCACCACCTCCTATAAAACACAACATGAATATTGGA
ACTTGGGATGAAAAAGGGTCAGTGGTAAAGGCTCCACCAACCCAACCAGTTCTGCCTCCTCAAACTATAA
TCCAGCAGCCTCAGCCATTAATTCAACCACCACCATTGGTGCAAAGCCAACTGCCTCAACAGCAGCCTCA
ACCACCACAACCACAGCAGCAACAAGGACCTCAGCCACAGGCCCAGCCTCACCAAGTGCAGCCTCAACAG
CAGCAGCTGCAGAATCGCTGGGTAGCTCCTCGTAACAGGGGAGCAGGCTTCAACCAGAACAATGGAGCGG
GCAGTGAAAACTTTGGTTTAGGTGTTGTACCTGTCAGTGCTTCACCTTCTAGTGTAGAAGTGCATCCCGT
GCTGGAAAAGCTAAAGGCCATAAACAACTATAATCCCAAAGACTTTGATTGGAATCTGAAGAATGGACGT
GTGTTTATAATTAAAAGCTACTCTGAGGATGACATACATCGTTCCATTAAATACTCTATCTGGTGTAGTA
CTGAGCATGGTAATAAGCGTTTGGATGCAGCTTACCGTTCCCTGAATGGGAAAGGCCCACTCTATTTACT
CTTCAGTGTGAATGGCAGTGGACATTTTTGTGGAGTGGCTGAAATGAAGTCTGTTGTGGACTATAATGCG
TATGCTGGTGTCTGGTCTCAGGATAAGTGGAAGGGCAAATTTGAAGTTAAATGGATCTTTGTCAAAGATG
TTCCCAATAACCAATTACGGCATATTCGCTTAGAAAATAATGACAACAAACCGGTTACCAATTCAAGGGA
CACTCAAGAGGTACCCCTAGAAAAAGCTAAGCAAGTGCTTAAAATAATTGCTACTTTCAAGCATACCACC
TCAATCTTTGATGACTTTGCACATTATGAAAAGCGTCAAGAAGAGGAGGAAGCCATGCGTAGGGAGAGAA
ATAGAAACAAACAATAA

Translation (588 aa):
MFYLDLTLFHRAEETGEESFSVQNGSIHQKDAVNDDDFEPYLSSQTNQSNSYPPMSDPYMPSYYAPSIGF
PYSLGEAAWSTAGDQPMPYLTTYGQMSNGEHHYIPDGVFSQPGALGNTPPFLGQHGFNFFPGNADFSTWG
TSGSQGQSTQSSAYSSSYGYPPSSLGRAITDGQAGFGNDTLSKVPGISSIEQGMTGLKIGGDLTAAVTKT
VGTALSSSGMTSIATNSVPPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIG
TWDEKGSVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGPQPQAQPHQVQPQQ
QQLQNRWVAPRNRGAGFNQNNGAGSENFGLGVVPVSASPSSVEVHPVLEKLKAINNYNPKDFDWNLKNGR
VFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGVAEMKSVVDYNA
YAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTT
SIFDDFAHYEKRQEEEEAMRRERNRNKQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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