CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS12931.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
12931.1 |
Public |
Homo sapiens |
19 |
ZNF580 |
24 |
110 |
108 |
|
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 12931.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000325333.10 |
ENSP00000320050.4 |
MANE Select |
Accepted |
alive |
|
|
|
EBI |
ENST00000543039.2 |
ENSP00000443957.1 |
|
Accepted |
alive |
|
|
|
EBI |
ENST00000545125.1 |
ENSP00000446126.1 |
|
Accepted |
alive |
|
|
|
NCBI |
NM_001163423.2 |
NP_001156895.1 |
|
Accepted |
alive |
|
|
|
NCBI |
NM_016202.2 |
NP_057286.1 |
|
Accepted |
alive |
|
|
|
NCBI |
NM_207115.2 |
NP_996998.1 |
MANE Select |
Accepted |
alive |
|
Chromosomal Locations for CCDS 12931.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (519 nt): ATGCTGCTGCTGCCGCCGCGGCCACCCCACCCTCGGTCCTCCTCTCCGGAGGCCATGGACCCACCGCCCC CCAAGGCTCCCCCTTTCCCCAAGGCGGAAGGCCCCTCCTCCACTCCTTCCTCGGCGGCGGGGCCCCGACC CCCGCGGCTGGGCCGCCACCTCCTCATCGACGCCAATGGGGTCCCCTACACATACACGGTGCAGCTGGAG GAGGAGCCCCGGGGCCCGCCCCAGCGCGAGGCGCCCCCAGGAGAGCCCGGCCCTCGCAAGGGCTACAGCT GCCCGGAGTGCGCCCGTGTCTTTGCCAGCCCTCTGCGGCTGCAGAGCCACCGCGTGTCGCACTCGGACCT CAAGCCCTTCACGTGCGGCGCCTGCGGCAAGGCCTTCAAGCGCTCCAGCCACCTGTCGCGGCATCGCGCC ACGCACCGCGCCCGCGCCGGGCCGCCGCACACCTGCCCGCTCTGCCCACGCCGCTTCCAGGACGCCGCGG AGCTGGCGCAGCACGTGCGCCTCCACTAA
Translation (172 aa): MLLLPPRPPHPRSSSPEAMDPPPPKAPPFPKAEGPSSTPSSAAGPRPPRLGRHLLIDANGVPYTYTVQLE EEPRGPPQREAPPGEPGPRKGYSCPECARVFASPLRLQSHRVSHSDLKPFTCGACGKAFKRSSHLSRHRA THRARAGPPHTCPLCPRRFQDAAELAQHVRLH
|