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Report for CCDS8876.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
8876.1 |
Public |
Homo sapiens |
12 |
NFE2 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:4778](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:8876.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:4778](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 12 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 8876.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000312156.8 |
ENSP00000312436.4 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000312156.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000312436.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000312156](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000312436](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000435572.7 |
ENSP00000397185.2 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000435572.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000397185.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000435572](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000397185](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000540264.2 |
ENSP00000439120.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000540264.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000439120.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000540264](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000439120](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000553070.5 |
ENSP00000447558.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000553070.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000447558.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000553070](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000447558](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001136023.3 |
NP_001129495.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001136023.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001129495.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001136023](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001129495](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001129495.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001261461.2 |
NP_001248390.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001261461.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001248390.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001261461](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001248390](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001248390.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001400365.1 |
NP_001387294.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001400365.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001387294.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001400365](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001387294](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001387294.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_006163.3 |
NP_006154.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_006163.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_006154.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_006163](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_006154](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_006154.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 8876.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1122 nt): ATGTCCCCGTGTCCTCCCCAGCAGAGCAGGAACAGGGTGATACAGCTGTCCACTTCAGAGCTAGGAGAGA TGGAACTGACTTGGCAGGAGATCATGTCCATCACCGAGCTGCAGGGTCTGAATGCTCCAAGTGAGCCATC ATTTGAGCCCCAAGCCCCAGCTCCATACCTTGGACCTCCACCACCCACAACTTACTGCCCCTGCTCAATC CACCCAGATTCTGGCTTCCCACTTCCTCCACCACCTTATGAGCTCCCAGCATCCACATCCCATGTCCCAG ATCCCCCATACTCCTATGGCAACATGGCCATACCAGTCTCCAAGCCACTGAGCCTCTCAGGCCTGCTCAG TGAGCCGCTCCAAGACCCCTTAGCCCTCCTGGACATTGGGCTGCCAGCAGGGCCACCTAAGCCCCAAGAA GACCCAGAATCCGACTCAGGATTATCCCTCAACTATAGCGATGCTGAATCTCTTGAGCTGGAGGGGACAG AGGCTGGTCGGCGGCGCAGCGAATATGTAGAGATGTACCCAGTGGAGTACCCCTACTCACTCATGCCCAA CTCCTTGGCCCACTCCAACTATACCTTGCCAGCTGCTGAGACCCCCTTGGCCTTAGAGCCCTCCTCAGGC CCTGTGCGGGCTAAGCCCACTGCACGGGGGGAGGCAGGGAGTCGGGATGAACGTCGGGCCTTGGCCATGA AGATTCCTTTTCCTACGGACAAGATTGTCAACTTGCCGGTAGATGACTTTAATGAGCTATTGGCAAGGTA CCCGCTGACAGAGAGCCAGCTAGCGCTAGTCCGGGACATCCGACGACGGGGCAAAAACAAGGTGGCAGCC CAGAACTGCCGCAAGAGGAAGCTGGAAACCATTGTGCAGCTGGAGCGGGAGCTGGAGCGGCTGACCAATG AACGGGAGCGGCTTCTCAGGGCCCGCGGGGAGGCAGACCGGACCCTGGAGGTCATGCGCCAACAGCTGAC AGAGCTGTACCGTGACATTTTCCAGCACCTTCGGGATGAATCAGGCAACAGCTACTCTCCTGAAGAGTAC GCGCTGCAACAGGCTGCCGATGGGACCATCTTCCTTGTGCCCCGGGGGACCAAGATGGAGGCCACAGACT GA
Translation (373 aa): MSPCPPQQSRNRVIQLSTSELGEMELTWQEIMSITELQGLNAPSEPSFEPQAPAPYLGPPPPTTYCPCSI HPDSGFPLPPPPYELPASTSHVPDPPYSYGNMAIPVSKPLSLSGLLSEPLQDPLALLDIGLPAGPPKPQE DPESDSGLSLNYSDAESLELEGTEAGRRRSEYVEMYPVEYPYSLMPNSLAHSNYTLPAAETPLALEPSSG PVRAKPTARGEAGSRDERRALAMKIPFPTDKIVNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAA QNCRKRKLETIVQLERELERLTNERERLLRARGEADRTLEVMRQQLTELYRDIFQHLRDESGNSYSPEEY ALQQAADGTIFLVPRGTKMEATD
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