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Report for CCDS75508.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75508.1 Public Homo sapiens 6 FAM184A 24 110 108 CCDS HistoryNCBI Gene:79632Re-query CCDS DB by CCDS ID:75508.1Re-query CCDS DB by GeneID:79632See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75508.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368475.8 ENSP00000357460.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368475.8Link to Ensembl Protein Viewer:ENSP00000357460.4Re-query CCDS DB by Nucleotide ID:ENST00000368475Re-query CCDS DB by Protein ID:ENSP00000357460
Original member Current member NCBI NM_001288576.2 NP_001275505.1 Accepted alive Link to Nucleotide Sequence:NM_001288576.2Link to Protein Sequence:NP_001275505.1Re-query CCDS DB by Nucleotide ID:NM_001288576Re-query CCDS DB by Protein ID:NP_001275505Link to BLAST:NP_001275505.1

Chromosomal Locations for CCDS 75508.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 118960103 118960184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118961761 118961963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118966835 118966952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118975024 118975208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118975917 118976044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118979365 118979518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118980138 118980350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 119002899 119003049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 119003501 119003622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 119006447 119006608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 119011309 119011431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 119016747 119016944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 119019978 119020159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 119022945 119023080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 119023959 119024612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2811 nt):
ATGAAGCAGCAGGCTTTGACAGAATTTGAAGCTTATAAGCACAGAGTTGAGGACATGCAACTTTGTGCAG
AA
GCCCAGCATGTCCAACGCATAGTGACCATGTCTAGAGAAGTCGAAGAGATTAGAAGGAAATTTGAAGA
A
AAATTACGGAGCTTTGGACAACTTCAAGTACAGTTTGAAAAAGACAAACGATTGGCATTGGAAGACTTG
CAA
GCTGCTCACAGACGGGAGATACAAGAGCTATTGAAGTCACAGCAGGATCACAGTGCCTCAGTAAATA
AA
GGCCAGGAAAAGGCAGAGGAACTACACAGAATGGAGGTGGAGTCCCTAAACAAAATGCTTGAGGAGCT
A
AGACTTGAACGGAAGAAACTAATTGAGGATTATGAAGGCAAGTTGAATAAAGCTCAGTCCTTTTATGAA
CGT
GAGCTTGATACTTTGAAAAGGTCACAGCTTTTTACAGCAGAAAGCCTACAGGCCAGCAAAGAAAAGG
AA
GCTGATCTTAGAAAAGAATTTCAGGGACAAGAAGCAATTTTACGAAAAACTATAGGAAAATTAAAGAC
A
GAGTTACAGATGGTACAGGATGAAGCTGGAAGTCTTCTTGACAAATGCCAAAAGCTTCAGACGGCACTT
GCC
ATAGCAGAGAACAATGTTCAGGTTCTTCAAAAACAGCTTGATGATGCCAAGGAGGGAGAAATGGCCC
TA
TTAAGCAAGCACAAAGAAGTGGAAAGTGAGCTAGCAGCTGCCAGAGAACGTTTACAACAGCAAGCTTC
A
GATCTTGTCCTCAAAGCTAGTCATATTGGAATGCTTCAAGCAACTCAAATGACCCAGGAAGTTACAATT
AAA
GATTTAGAATCAGAAAAATCGAGAGTCAATGAGAGATTATCTCAACTTGAAGAGGAAAGAGCTTTTT
TG
CGAAGCAAAACCCAAAGTCTGGATGAAGAGCAGAAGCAACAGATTCTAGAACTGGAGAAGAAAGTAAA
T
GAAGCAAAGAGAACTCAGCAAGAATATTATGAAAGGGAACTTAAAAACCTGCAAAGTAGATTGGAAGAG
GAG
GTGACTCAATTAAACGAGGCCCATTCTAAGACTTTGGAAGAATTAGCTTGGAAGCACCATATGGCAA
TT
GAAGCTGTCCACAGTAATGCAATTAGGGATAAGAAAAAACTGCAAATGGATTTGGAAGAACAACATAA
C
AAAGATAAACTAAACCTGGAAGAGGATAAAAATCAGCTTCAACAAGAGCTAGAAAACCTAAAGGAAGTA
CTG
GAAGACAAGTTGAATACAGCCAATCAAGAGATTGGCCACCTCCAAGATATGGTAAGGAAAAGTGAAC
AA
GGTCTTGGCTCTGCAGAAGGACTTATTGCTAGTCTTCAGGACTCCCAGGAAAGGCTTCAGAATGAGCT
T
GACTTGACTAAAGACAGCCTAAAGGAGACCAAGGATGCTCTATTAAATGTGGAGGGTGAGCTAGAACAA
GAA
AGGCAACAGCATGAAGAAACAATTGCTGCCATGAAAGAAGAAGAGAAGCTCAAAGTGGACAAAATGG
CC
CATGACTTAGAAATTAAGTGGACTGAAAATCTTAGACAAGAGTGTTCTAAACTTCGTGAAGAGTTAAG
G
CTTCAACATGAAGAGGATAAGAAGTCAGCAATGTCTCAACTTTTGCAGTTGAAAGATCGAGAGAAAAAT
GCA
GCAAGAGATTCATGGCAGAAGAAAGTAGAAGATCTCTTAAACCAGATTTCCTTGCTGAAACAGAATC
TG
GAGATACAGCTTTCCCAGTCTCAGACTTCTTTGCAACAACTGCAAGCCCAGTTTACGCAAGAACGACA
G
CGGCTTACGCAAGAGCTTGAAGAATTAGAGGAGCAACATCAGCAAAGACACAAATCATTAAAAGAAGCA
CAT
GTCCTTGCATTTCAAACTATGGAAGAGGAAAAGGAAAAGGAGCAAAGAGCTCTTGAAAATCATTTAC
AA
CAGAAGCATTCTGCAGAGCTTCAATCACTAAAAGATGCACACAGAGAGTCAATGGAGGGCTTCCGGAT
A
GAAATGGAACAGGAACTTCAGACTCTTCGGTTTGAATTAGAAGATGAAGGAAAGGCTATGCTTGCTTCC
TTG
CGCTCAGAACTCAACCATCAACATGCAGCTGCAATTGATTTGTTACGGCATAATCATCATCAAGAAT
TG
GCAGCTGCTAAAATGGAATTAGAGAGAAGCATAGACATCAGCAGAAGACAGAGTAAGGAGCACATATG
T
AGAATTACAGATCTACAAGAGGAATTAAGACACAGAGAGCATCACATCTCTGAATTGGATAAGGAGGTT
CAG
CACCTTCATGAGAATATAAGTGCCCTAACCAAAGAACTGGAATTTAAGGGGAAAGAAATTCTCAGAA
TA
CGAAGTGAATCTAACCAACAGATAAGATTAGAAGAAATGGAAGAAAAATATCTAATGAGAGAATCAAA
A
CCAGAAGATATACAGATGATTACAGAATTAAAAGCCATGCTTACAGAAAGAGACCAGATCATAAAGAAA
CTA
ATTCAAAAGAAGAAGAATGATAAATCACCAACAAACAGGTTTGTGAGTGTTCCCAATCTAAGTGCTC
TG
GAATCTGGTGGAGTGGGCAATGGACATCCTAACCGCCTGGATCCCATTCCTAATTCTCCAGTCCACGA
T
ATTGAGTTCAACAGCAGCAAACCACTTCCACAGCCAGTGCCACCTAAAGGGCCCAAGACATTTTTGAGT
CCT
GCTCAGAGTGAAGCTTCTCCAGTGGCTTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACT
TC
ACATTCTGA


Translation (936 aa):
MKQQALTEFEAYKHRVEDMQLCAEAQHVQRIVTMSREVEEIRRKFEEKLRSFGQLQVQFEKDKRLALEDL
Q
AAHRREIQELLKSQQDHSASVNKGQEKAEELHRMEVESLNKMLEELRLERKKLIEDYEGKLNKAQSFYE
R
ELDTLKRSQLFTAESLQASKEKEADLRKEFQGQEAILRKTIGKLKTELQMVQDEAGSLLDKCQKLQTAL
A
IAENNVQ
VLQKQLDDAKEGEMALLSKHKEVESELAAARERLQQQASDLVLKASHIGMLQATQMTQEVTI
K
DLESEKSRVNERLSQLEEERAFLRSKTQSLDEEQKQQILELEK
KVNEAKRTQQEYYERELKNLQSRLEE
E
VTQLNEAHSKTLEELAWKHHMAIEAVHSNAIRDKKKLQM
DLEEQHNKDKLNLEEDKNQLQQELENLKEV
L
EDKLNTANQE
IGHLQDMVRKSEQGLGSAEGLIASLQDSQERLQNELDLTKDSLKETKDALLNVEGELEQ
E
RQQHEETIAAMKEEEKLKVDKMAHDLEIKWTENL
RQECSKLREELRLQHEEDKKSAMSQLLQLKDREKN
A
ARDSWQKKVEDLLNQ
ISLLKQNLEIQLSQSQTSLQQLQAQFTQERQRLTQELEELEEQHQQRHKSLKEA
H
VLAFQTMEEEKEKEQR
ALENHLQQKHSAELQSLKDAHRESMEGFRIEMEQELQTLRFELEDEGKAMLAS
L
RSELNHQHAAAIDLLRHNHHQELAAAKMELERSIDISRRQ
SKEHICRITDLQEELRHREHHISELDKEV
Q
HLHENISALTKELEFKGKEILRIRSESNQQI
RLEEMEEKYLMRESKPEDIQMITELKAMLTERDQIIKK
L
I
QKKKNDKSPTNRFVSVPNLSALESGGVGNGHPNRLDPIPNSPVHDIEFNSSKPLPQPVPPKGPKTFLS
P
AQSEASPVASPDPQRQEWFARYFTF




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser