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Report for CCDS44189.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44189.1 Public Homo sapiens 1 CYB561D1 24 110 108 CCDS HistoryNCBI Gene:284613Re-query CCDS DB by CCDS ID:44189.1Re-query CCDS DB by GeneID:284613See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44189.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393709.3 ENSP00000377312.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393709.3Link to Ensembl Protein Viewer:ENSP00000377312.3Re-query CCDS DB by Nucleotide ID:ENST00000393709Re-query CCDS DB by Protein ID:ENSP00000377312
Original member Current member NCBI NM_001134402.2 NP_001127874.1 Accepted alive Link to Nucleotide Sequence:NM_001134402.2Link to Protein Sequence:NP_001127874.1Re-query CCDS DB by Nucleotide ID:NM_001134402Re-query CCDS DB by Protein ID:NP_001127874Link to BLAST:NP_001127874.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001127874.1 172 Q8N8Q1-5 172 100% 0 0

Chromosomal Locations for CCDS 44189.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 109494140 109494154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109495756 109496259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (519 nt):
ATGCAGCCCCTGGAGTTCTGCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCACCTGAACACTCCCTGT
TCTTCTTCTGCTCCCGAAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGACCCTAGCCATCCTCTGTGC
AGCTCTGGGCCTGGGCTTCATCATCTCCAGCAGGACCCGCAGTGAGCTGCCTCATCTGGTGTCCTGGCAC
AGCTGGGTGGGAGCCCTGACACTGCTGGCCACTGCTGTCCAGGCACTGTGTGGGCTCTGCCTCCTTTGTC
CCCGGGCAGCCAGGGTCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGACATGTGGACTGGTGGTCTA
CCTGATGGCTACAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCG
GCCTGGTACCTGTGCCTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATGCACCAGATTTCCAGATCCT
ACTTGCCGAGGAAGAAAATGGAAATGTGA

Translation (172 aa):
MQPLEFCLCMAEAILLFSPEHSLFFFCSRKARIRLHWAGQTLAILCAALGLGFIISSRTRSELPHLVSWH
SWVGALTLLATAVQALCGLCLLCPRAARVSRVARLKLYHLTCGLVVYLMATVTVLLGMYSVWFQAQIKGA
AWYLCLALPVYPALVIMHQISRSYLPRKKMEM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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