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Report for CCDS55723.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55723.1 Public Homo sapiens 10 CRTAC1 24 110 108 CCDS HistoryNCBI Gene:55118Re-query CCDS DB by CCDS ID:55723.1Re-query CCDS DB by GeneID:55118See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 55723.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370591.6 ENSP00000359623.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000370591.6Link to Ensembl Protein Viewer:ENSP00000359623.2Re-query CCDS DB by Nucleotide ID:ENST00000370591Re-query CCDS DB by Protein ID:ENSP00000359623
Original member Current member NCBI NM_001206528.3 NP_001193457.1 Accepted alive Link to Nucleotide Sequence:NM_001206528.3Link to Protein Sequence:NP_001193457.1Re-query CCDS DB by Nucleotide ID:NM_001206528Re-query CCDS DB by Protein ID:NP_001193457Link to BLAST:NP_001193457.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001193457.1 645 Q9NQ79-2 645 100% 0 0

Chromosomal Locations for CCDS 55723.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 97879683 97879801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97880249 97880392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97882786 97882828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97884206 97884351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97895245 97895413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97895885 97895985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97896909 97896991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97901503 97901639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97904669 97904814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97908013 97908147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97917500 97917656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97923264 97923400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97936170 97936366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98011138 98011337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98030449 98030472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1938 nt):
ATGGCTCCGAGCGCTGACCCCGGCATGTCCAGGATGTTACCGTTCCTGCTGCTGCTCTGGTTTCTGCCCA
TCACTGAGGGGTCCCAGCGGGCTGAACCCATGTTCACTGCAGTCACCAACTCAGTTCTGCCTCCTGACTA
TGACAGTAATCCCACCCAGCTCAACTATGGTGTGGCAGTTACTGATGTGGACCATGATGGGGACTTTGAG
ATCGTCGTGGCGGGGTACAATGGACCCAACCTGGTTCTGAAGTATGACCGGGCCCAGAAGCGGCTGGTGA
ACATCGCGGTCGATGAGCGCAGCTCACCCTACTACGCGCTGCGGGACCGGCAGGGGAACGCCATCGGGGT
CACAGCCTGCGACATCGACGGGGACGGCCGGGAGGAGATCTACTTCCTCAACACCAATAATGCCTTCTCG
GGGGTGGCCACGTACACCGACAAGTTGTTCAAGTTCCGCAATAACCGGTGGGAAGACATCCTGAGCGATG
AGGTCAACGTGGCCCGTGGTGTGGCCAGCCTCTTTGCCGGACGCTCTGTGGCCTGTGTGGACAGAAAGGG
CTCTGGACGCTACTCTATCTACATTGCCAATTACGCCTACGGTAATGTGGGCCCTGATGCCCTCATTGAA
ATGGACCCTGAGGCCAGTGACCTCTCCCGGGGCATTCTGGCGCTCAGAGATGTGGCTGCTGAGGCTGGGG
TCAGCAAATATACAGGGGGCCGAGGCGTCAGCGTGGGCCCCATCCTCAGCAGCAGTGCCTCGGATATCTT
CTGCGACAATGAGAATGGGCCTAACTTCCTTTTCCACAACCGGGGCGATGGCACCTTTGTGGACGCTGCG
GCCAGTGCTGGTGTGGACGACCCCCACCAGCATGGGCGAGGTGTCGCCCTGGCTGACTTCAACCGTGATG
GCAAAGTGGACATCGTCTATGGCAACTGGAATGGCCCCCACCGCCTCTATCTGCAAATGAGCACCCATGG
GAAGGTCCGCTTCCGGGACATCGCCTCACCCAAGTTCTCCATGCCCTCCCCTGTCCGCACGGTCATCACC
GCCGACTTTGACAATGACCAGGAGCTGGAGATCTTCTTCAACAACATTGCCTACCGCAGCTCCTCAGCCA
ACCGCCTCTTCCGCGTCATCCGTAGAGAGCACGGAGACCCCCTCATCGAGGAGCTCAATCCCGGCGACGC
CTTGGAGCCTGAGGGCCGGGGCACAGGGGGTGTGGTGACCGACTTCGACGGAGACGGGATGCTGGACCTC
ATCTTGTCCCATGGAGAGTCCATGGCTCAGCCGCTGTCCGTCTTCCGGGGCAATCAGGGCTTCAACAACA
ACTGGCTGCGAGTGGTGCCACGCACCCGGTTTGGGGCCTTTGCCAGGGGAGCTAAGGTCGTGCTCTACAC
CAAGAAGAGTGGGGCCCACCTGAGGATCATCGACGGGGGCTCAGGCTACCTGTGTGAGATGGAGCCCGTG
GCACACTTTGGCCTGGGGAAGGATGAAGCCAGCAGTGTGGAGGTGACGTGGCCAGATGGCAAGATGGTGA
GCCGGAACGTGGCCAGCGGGGAGATGAACTCAGTGCTGGAGATCCTCTACCCCCGGGATGAGGACACACT
TCAGGACCCAGCCCCACTGGAGTGTGGCCAAGGATTCTCCCAGCAGGAAAATGGCCATTGCATGGACACC
AATGAATGCATCCAGTTCCCATTCGTGTGCCCTCGAGACAAGCCCGTATGTGTCAACACCTATGGAAGCT
ACAGGTGCCGGACCAACAAGAAGTGCAGTCGGGGCTACGAGCCCAACGAGGATGGCACAGCCTGCGTGGC
TCAAGTGGCCTTTTTAGGTGGGTATTCTTCAGCCGCCTCTAGAATCTCTGAGCCTCTCTCTCGGGCCTCA
TATCTTTCTCTAGGCCTTGGACTTTGCCTTCAGTTATATGCACTTTAA

Translation (645 aa):
MAPSADPGMSRMLPFLLLLWFLPITEGSQRAEPMFTAVTNSVLPPDYDSNPTQLNYGVAVTDVDHDGDFE
IVVAGYNGPNLVLKYDRAQKRLVNIAVDERSSPYYALRDRQGNAIGVTACDIDGDGREEIYFLNTNNAFS
GVATYTDKLFKFRNNRWEDILSDEVNVARGVASLFAGRSVACVDRKGSGRYSIYIANYAYGNVGPDALIE
MDPEASDLSRGILALRDVAAEAGVSKYTGGRGVSVGPILSSSASDIFCDNENGPNFLFHNRGDGTFVDAA
ASAGVDDPHQHGRGVALADFNRDGKVDIVYGNWNGPHRLYLQMSTHGKVRFRDIASPKFSMPSPVRTVIT
ADFDNDQELEIFFNNIAYRSSSANRLFRVIRREHGDPLIEELNPGDALEPEGRGTGGVVTDFDGDGMLDL
ILSHGESMAQPLSVFRGNQGFNNNWLRVVPRTRFGAFARGAKVVLYTKKSGAHLRIIDGGSGYLCEMEPV
AHFGLGKDEASSVEVTWPDGKMVSRNVASGEMNSVLEILYPRDEDTLQDPAPLECGQGFSQQENGHCMDT
NECIQFPFVCPRDKPVCVNTYGSYRCRTNKKCSRGYEPNEDGTACVAQVAFLGGYSSAASRISEPLSRAS
YLSLGLGLCLQLYAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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