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Report for CCDS91314.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91314.1 Public Homo sapiens 10 HPS1 24 110 108 CCDS HistoryNCBI Gene:3257Re-query CCDS DB by CCDS ID:91314.1Re-query CCDS DB by GeneID:3257See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91314.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000699139.1 ENSP00000514156.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000699139.1Link to Ensembl Protein Viewer:ENSP00000514156.1Re-query CCDS DB by Nucleotide ID:ENST00000699139Re-query CCDS DB by Protein ID:ENSP00000514156
Original member Current member NCBI NM_001322480.2 NP_001309409.1 Accepted alive Link to Nucleotide Sequence:NM_001322480.2Link to Protein Sequence:NP_001309409.1Re-query CCDS DB by Nucleotide ID:NM_001322480Re-query CCDS DB by Protein ID:NP_001309409Link to BLAST:NP_001309409.1
Original member Current member NCBI NM_001322481.2 NP_001309410.1 Accepted alive Link to Nucleotide Sequence:NM_001322481.2Link to Protein Sequence:NP_001309410.1Re-query CCDS DB by Nucleotide ID:NM_001322481Re-query CCDS DB by Protein ID:NP_001309410Link to BLAST:NP_001309410.1

Chromosomal Locations for CCDS 91314.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 98417564 98417726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98418175 98418257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98420045 98420158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98422369 98422513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98423603 98423668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98423753 98423887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98424313 98424374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98425541 98425720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98425818 98425985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98427215 98427264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98429573 98429642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98429791 98429889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98430571 98430670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98433940 98434091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98435635 98435772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98443124 98443240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1842 nt):
ATGAAGTGCGTCTTGGTGGCCACTGAGGGCGCAGAGGTCCTCTTCTACTGGACAGATCAGGAGTTTGAAG
AGAGTCTCCGGCTGAAGTTCGGGCAGTCAGAGAATGAGGAAGAAGAGCTCCCTGCCCTGGAGGACCAGCT
CAGCACCCTCCTAGCCCCGGTCATCATCTCCTCCATGACGATGCTGGAGAAGCTCTCGGACACCTACACC
TGCTTCTCCACGGAAAATGGCAACTTCCTGTATGTCCTTCACCTGGCTGCGGCCCCCAGACCTGGCGCAG
CGTGTCCAGCTGTGGGAGCACTTCCAGAGCCTGCTGTGGACCTACAGCCGCCTGCGGGAGCAGGAGCAGT
GCTTCGCCGTGGAGGTGACTACTGGGCGCGGGAGTCCTCAGGACTTGAAGCTGTCAGCCACAGTGCCAGC
TCCCTGCGCCCGGCCGACCTGCTTGCCCTCATCCTCCTGGTTCAGGACCTCTACCCCAGCGAGAGCACAG
CAGAGGACGACATTCAGCCTTCCCCGCGGAGGGCCCGGAGCAGCCAGAACATCCCCGTGCAGCAGGCCTG
GAGCCCTCACTCCACGGGCCCAACTGGGGGGAGCTCTGCAGAGACGGAGACAGACAGCTTCTCCCTCCCT
GAGGAGTACTTCACACCAGCTCCTTCCCCTGGCGATCAGAGCTCAGGTAGCACCATCTGGCTGGAGGGGG
GCACCCCCCCCATGGATGCCCTTCAGATAGCAGAGGACACCCTCCAAACACTGGTTCCCCACTGCCCTGT
GCCTTCCGGCCCCAGAAGGATCTTCCTGGATGCCAACGTGAAGGAAAGCTACTGCCCCCTAGTGCCCCAC
ACCATGTACTGCCTGCCCCTGTGGCAGGGCATCAACCTGGTGCTCCTGACCAGGAGCCCCAGCGCGCCCC
TGGCCCTGGTTCTGTCCCAGCTGATGGATGGCTTCTCCATGCTGGAGAAGAAGCTGAAGGAAGGGCCGGA
GCCCGGGGCCTCCCTGCGCTCCCAGCCCCTCGTGGGAGACCTGCGCCAGAGGATGGACAAGTTTGTCAAG
AATCGAGGGGCACAGGAGATTCAGAGCACCTGGCTGGAGTTTAAGGCCAAGGCTTTCTCCAAAAGTGAGC
CCGGATCCTCCTGGGAGCTGCTCCAGGCATGTGGGAAGCTGAAGCGGCAGCTCTGCGCCATCTACCGGCT
GAACTTTCTGACCACAGCCCCCAGCAGGGGAGGCCCACACCTGCCCCAGCACCTGCAGGACCAAGTGCAG
AGGCTCATGCGGGAGAAGCTGACGGACTGGAAGGACTTCTTGCTGGTGAAGAGCAGGAGGAACATCACCA
TGGTGTCCTACCTAGAAGACTTCCCAGGCTTGGTGCACTTCATCTATGTGGACCGCACCACTGGGCAGAT
GGTGGCGCCTTCCCTCAACTGCAGTCAAAAGACCTCGTCGGAGTTGGGCAAGGGGCCGCTGGCTGCCTTT
GTCAAAACTAAGGTCTGGTCTCTGATCCAGCTGGCGCGCAGATACCTGCAGAAGGGCTACACCACGCTGC
TGTTCCAGGAGGGGGATTTCTACTGCTCCTACTTCCTGTGGTTCGAGAATGACATGGGGTACAAACTCCA
GATGATCGAGGTGCCCGTCCTCTCCGACGACTCAGTGCCTATCGGCATGCTGGGAGGAGACTACTACAGG
AAGCTCCTGCGCTACTACAGCAAGAACCGCCCAACCGAGGCTGTCAGGTGCTACGAGCTGCTGGCCCTGC
ACCTGTCTGTCATCCCCACTGACCTGCTGGTGCAGCAGGCCGGCCAGCTGGCCCGGCGCCTCTGGGAGGC
CTCCCGTATCCCCCTGCTCTAG

Translation (613 aa):
MKCVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMTMLEKLSDTYT
CFSTENGNFLYVLHLAAAPRPGAACPAVGALPEPAVDLQPPAGAGAVLRRGGDYWARESSGLEAVSHSAS
SLRPADLLALILLVQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTGGSSAETETDSFSLP
EEYFTPAPSPGDQSSGSTIWLEGGTPPMDALQIAEDTLQTLVPHCPVPSGPRRIFLDANVKESYCPLVPH
TMYCLPLWQGINLVLLTRSPSAPLALVLSQLMDGFSMLEKKLKEGPEPGASLRSQPLVGDLRQRMDKFVK
NRGAQEIQSTWLEFKAKAFSKSEPGSSWELLQACGKLKRQLCAIYRLNFLTTAPSRGGPHLPQHLQDQVQ
RLMREKLTDWKDFLLVKSRRNITMVSYLEDFPGLVHFIYVDRTTGQMVAPSLNCSQKTSSELGKGPLAAF
VKTKVWSLIQLARRYLQKGYTTLLFQEGDFYCSYFLWFENDMGYKLQMIEVPVLSDDSVPIGMLGGDYYR
KLLRYYSKNRPTEAVRCYELLALHLSVIPTDLLVQQAGQLARRLWEASRIPLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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