NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS35067.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35067.1 Public Homo sapiens 9 ZNF484 24 110 108 CCDS HistoryNCBI Gene:83744Re-query CCDS DB by CCDS ID:35067.1Re-query CCDS DB by GeneID:83744See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35067.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332591.6 ENSP00000364646.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000332591.6Link to Ensembl Protein Viewer:ENSP00000364646.3Re-query CCDS DB by Nucleotide ID:ENST00000332591Re-query CCDS DB by Protein ID:ENSP00000364646
Original member Current member EBI ENST00000395506.7 ENSP00000378882.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395506.7Link to Ensembl Protein Viewer:ENSP00000378882.4Re-query CCDS DB by Nucleotide ID:ENST00000395506Re-query CCDS DB by Protein ID:ENSP00000378882
Original member Current member NCBI NM_001007101.4 NP_001007102.1 Accepted alive Link to Nucleotide Sequence:NM_001007101.4Link to Protein Sequence:NP_001007102.1Re-query CCDS DB by Nucleotide ID:NM_001007101Re-query CCDS DB by Protein ID:NP_001007102Link to BLAST:NP_001007102.1
Original member Current member NCBI NM_001261459.3 NP_001248388.1 Accepted alive Link to Nucleotide Sequence:NM_001261459.3Link to Protein Sequence:NP_001248388.1Re-query CCDS DB by Nucleotide ID:NM_001261459Re-query CCDS DB by Protein ID:NP_001248388Link to BLAST:NP_001248388.1
Original member Current member NCBI NM_001261460.3 NP_001248389.1 Accepted alive Link to Nucleotide Sequence:NM_001261460.3Link to Protein Sequence:NP_001248389.1Re-query CCDS DB by Nucleotide ID:NM_001261460Re-query CCDS DB by Protein ID:NP_001248389Link to BLAST:NP_001248389.1
Original member Current member NCBI NM_001354536.2 NP_001341465.1 Accepted alive Link to Nucleotide Sequence:NM_001354536.2Link to Protein Sequence:NP_001341465.1Re-query CCDS DB by Nucleotide ID:NM_001354536Re-query CCDS DB by Protein ID:NP_001341465Link to BLAST:NP_001341465.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001007102.1 816 Q5JVG2-2 816 100% 0 0
NP_001248388.1 816 Q5JVG2-2 816 100% 0 0
NP_001248389.1 816 Q5JVG2-2 816 100% 0 0
NP_001341465.1 816 Q5JVG2-2 816 100% 0 0

Chromosomal Locations for CCDS 35067.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 92846228 92848551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92855811 92855903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92856192 92856225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2451 nt):
ATGCTGGAAAACTATTTCAACTTGATCTCAGTGGGATGTCAAGTTCCCAAACCAGAAGTCATCTTCAGCT
TGGAACAAGAAGAGCCATGTATGTTGGATGGTGAGATCCCCAGTCAGAGCCGTCCAGATGGGGACATTGG
TTTTGGACCTTTACAACAGAGGATGTCTGAAGAAGTTTCTTTCCAGTCTGAGATTAATATTAATCTCTTC
ACAAGAGATGACCCATATTCCATTTTAGAAGAATTGTGGAAAGACGATGAACACACAAGAAAATGTGGAG
AAAACCAGAACAAACCTTTAAGTCGTGTTGTCTTCATTAACAAGAAAACACTAGCTAATGACAGCATCTT
TGAATATAAGGACATTGGGGAAATAGTTCATGTAAACACACACCTGGTTTCCTCAAGAAAAAGACCCCAT
AACTGTAACTCGTGTGGAAAGAATTTGGAGCCTATCATAACCTTATATAATAGAAACAATGCAACAGAAA
ATTCTGATAAGACTATTGGAGATGGTGATATTTTCACTCATTTGAATTCTCATACAGAAGTGACTGCTTG
TGAATGTAACCAATGTGGGAAACCTCTGCATCATAAGCAAGCTCTCATTCAACAACAGAAAATTCATACT
AGAGAGAGCCTCTATTTGTTTTCTGACTACGTAAATGTTTTCTCCCCGAAGTCACATGCCTTTGCACATG
AGAGTATTTGTGCTGAAGAAAAGCAGCATGAATGCCATGAATGTGAGGCAGTCTTCACTCAGAAGTCCCA
GCTTGATGGCAGTCAGAGGGTTTATGCAGGAATATGCACTGAATATGAGAAGGATTTTTCCCTCAAGTCA
AACCGTCAGAAAACTCCTTATGAGGGGAATTACTATAAATGCAGTGACTATGGAAGAGCCTTTATCCAGA
AGTCAGATCTGTTCAGATGCCAGAGAATTCATTCTGGAGAAAAACCTTATGAGTACAGTGAATGTGAGAA
AAACCTCCCTCAGAATTCAAACCTTAATATACATAAAAAAATTCATACTGGAGGGAAACACTTTGAATGT
ACTGAATGTGGAAAAGCTTTCACAAGGAAATCAACACTAAGTATGCATCAGAAAATCCATACAGGAGAAA
AACCTTATGTATGTACTGAATGTGGGAAGGCCTTTATCCGGAAGTCACATTTTATCACACATGAAAGAAT
TCATACTGGAGAAAAACCCTATGAATGCAGTGACTGTGGGAAATCCTTTATTAAAAAATCACAACTCCAT
GTGCATCAGCGAATTCACACAGGAGAGAATCCCTTTATATGTTCAGAATGTGGGAAGGTCTTCACTCACA
AGACAAATCTCATTATACACCAGAAAATTCATACAGGAGAAAGACCCTATATATGTACTGTGTGTGGTAA
GGCCTTTACTGACAGGTCAAATCTCATTAAGCACCAAAAAATTCATACTGGAGAGAAACCTTATAAATGC
AGCGACTGTGGAAAATCATTCACCTGGAAGTCTCGGCTCAGGATACATCAGAAGTGTCATACTGGAGAGA
GACATTATGAATGCAGTGAATGTGGGAAAGCATTCATTCAGAAGTCAACATTAAGTATGCACCAGAGAAT
TCATAGAGGGGAAAAACCATATGTTTGCACTGAATGTGGTAAGGCCTTCTTCCACAAATCCCATTTTATT
ACACATGAGAGAATTCATACTGGAGAGAAACCCTATGAATGCAGTATTTGTGGGAAATCCTTCACTAAGA
AATCACAGCTCCACGTACATCAGCAGATTCACACAGGAGAGAAACCCTATAGGTGTGCTGAATGTGGAAA
GGCTTTTACTGACAGATCAAATCTCTTTACACACCAGAAAATTCACACTGGAGAGAAACCTTATAAATGT
AGTGACTGTGGGAAAGCCTTCACTAGGAAGTCAGGTCTCCATATACATCAGCAATCCCATACTGGAGAAA
GGCATTATGAGTGCAGTGAATGTGGGAAAGCCTTTGCAAGAAAATCAACACTAATTATGCATCAGAGAAT
TCATACAGGAGAGAAACCCTATATTTGTAATGAATGTGGGAAATCCTTCATCCAGAAGTCACACTTAAAT
AGACACAGGAGAATTCATACTGGAGAGAAACCCTATGAATGCAGTGACTGTGGCAAGTCTTTCATTAAGA
AATCACAACTCCATGAGCATCATCGAATTCACACAGGAGAGAAACCATATATATGTGCTGAGTGTGGAAA
GGCCTTCACCATCAGATCAAATCTTATTAAACACCAGAAAATTCATACTAAACAGAAACCCTATAAGTGC
AGTGACTTGGGGAAAGCCTTAAACTGGAAGCCACAACTCAGTATGCCTCAGAAATCTGACAATGGGGAAG
TAGAGTGCTCCATGCCACAATTATGGTGTGGGGACTCAGAAGGTGACCAAGGCCAACTTTCTTCTATCTA
G

Translation (816 aa):
MLENYFNLISVGCQVPKPEVIFSLEQEEPCMLDGEIPSQSRPDGDIGFGPLQQRMSEEVSFQSEININLF
TRDDPYSILEELWKDDEHTRKCGENQNKPLSRVVFINKKTLANDSIFEYKDIGEIVHVNTHLVSSRKRPH
NCNSCGKNLEPIITLYNRNNATENSDKTIGDGDIFTHLNSHTEVTACECNQCGKPLHHKQALIQQQKIHT
RESLYLFSDYVNVFSPKSHAFAHESICAEEKQHECHECEAVFTQKSQLDGSQRVYAGICTEYEKDFSLKS
NRQKTPYEGNYYKCSDYGRAFIQKSDLFRCQRIHSGEKPYEYSECEKNLPQNSNLNIHKKIHTGGKHFEC
TECGKAFTRKSTLSMHQKIHTGEKPYVCTECGKAFIRKSHFITHERIHTGEKPYECSDCGKSFIKKSQLH
VHQRIHTGENPFICSECGKVFTHKTNLIIHQKIHTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPYKC
SDCGKSFTWKSRLRIHQKCHTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPYVCTECGKAFFHKSHFI
THERIHTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPYKC
SDCGKAFTRKSGLHIHQQSHTGERHYECSECGKAFARKSTLIMHQRIHTGEKPYICNECGKSFIQKSHLN
RHRRIHTGEKPYECSDCGKSFIKKSQLHEHHRIHTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPYKC
SDLGKALNWKPQLSMPQKSDNGEVECSMPQLWCGDSEGDQGQLSSI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH