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Report for CCDS2719.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2719.1 Public Homo sapiens 3 ZNF502 24 110 108 CCDS HistoryNCBI Gene:91392Re-query CCDS DB by CCDS ID:2719.1Re-query CCDS DB by GeneID:91392See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2719.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296091.8 ENSP00000296091.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000296091.8Link to Ensembl Protein Viewer:ENSP00000296091.4Re-query CCDS DB by Nucleotide ID:ENST00000296091Re-query CCDS DB by Protein ID:ENSP00000296091
Original member Current member EBI ENST00000449836.5 ENSP00000397390.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000449836.5Link to Ensembl Protein Viewer:ENSP00000397390.1Re-query CCDS DB by Nucleotide ID:ENST00000449836Re-query CCDS DB by Protein ID:ENSP00000397390
Original member Current member EBI ENST00000436624.7 ENSP00000406469.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000436624.7Link to Ensembl Protein Viewer:ENSP00000406469.2Re-query CCDS DB by Nucleotide ID:ENST00000436624Re-query CCDS DB by Protein ID:ENSP00000406469
Original member Current member NCBI NM_001134440.2 NP_001127912.1 Accepted alive Link to Nucleotide Sequence:NM_001134440.2Link to Protein Sequence:NP_001127912.1Re-query CCDS DB by Nucleotide ID:NM_001134440Re-query CCDS DB by Protein ID:NP_001127912Link to BLAST:NP_001127912.1
Original member Current member NCBI NM_001134441.2 NP_001127913.1 Accepted alive Link to Nucleotide Sequence:NM_001134441.2Link to Protein Sequence:NP_001127913.1Re-query CCDS DB by Nucleotide ID:NM_001134441Re-query CCDS DB by Protein ID:NP_001127913Link to BLAST:NP_001127913.1
Original member Current member NCBI NM_001134442.3 NP_001127914.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001134442.3Link to Protein Sequence:NP_001127914.1Re-query CCDS DB by Nucleotide ID:NM_001134442Re-query CCDS DB by Protein ID:NP_001127914Link to BLAST:NP_001127914.1
Original member Current member NCBI NM_001282880.2 NP_001269809.1 Accepted alive Link to Nucleotide Sequence:NM_001282880.2Link to Protein Sequence:NP_001269809.1Re-query CCDS DB by Nucleotide ID:NM_001282880Re-query CCDS DB by Protein ID:NP_001269809Link to BLAST:NP_001269809.1
Original member Current member NCBI NM_033210.5 NP_149987.2 Accepted alive Link to Nucleotide Sequence:NM_033210.5Link to Protein Sequence:NP_149987.2Re-query CCDS DB by Nucleotide ID:NM_033210Re-query CCDS DB by Protein ID:NP_149987Link to BLAST:NP_149987.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001127912.1 544 Q8TBZ5 544 100% 0 0
NP_001127913.1 544 Q8TBZ5 544 100% 0 0
NP_001127914.1 544 Q8TBZ5 544 100% 0 0
NP_001269809.1 544 Q8TBZ5 544 100% 0 0
NP_149987.2 544 Q8TBZ5 544 100% 0 0

Chromosomal Locations for CCDS 2719.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 44720262 44720316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44720873 44722452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1635 nt):
ATGTTGAATATGCAAGGAGCTGAAGAGAGAGACATTAGAAGAGAGACTTGTCCAGGCTGGGTAAACAAGA
ACAAGCCTGCTCTGGAGCAGGATGTCTGTAAAATTGACTCATCAGGGATAGTAGTAAAGAGGTTCCAAGA
GGATGAATACCAAGATTCTACATTTGAAGAAAAATATGCATGTGAGGGCATGAAGGAAAACTCTCCTAGG
GAGATTGCTGAATCATGCCTTTTCCAGGAAGGAGGTTTTGGGAGAATAACTTTCATCCACAAAGAAGCAC
CCCCTGAAATTATTAGTCAAGGATATAATTTTGAGAAAAGCTTGCTTTTGACCTCAAGCCTTGTTACACG
TCTCAGGGTTTCTACAGAAGAGAGTCTGCATCAGTGGGAAACAAGTAATATACAAACCAATGATATTTCA
GACCAAAGTAAATGTCCAACTCTCTGCACACAGAAAAAATCTTGGAAATGTAATGAATGTGGAAAAACCT
TTACTCAGAGCTCATCCCTTACCCAACATCAGAGAACTCATACTGGAGAGAGACCCTACACATGTGAGGA
ATGTGGGAAAGCCTTTAGTCGTAGTTCATTCCTTGTTCAACATCAAAGAATTCACACTGGAGTGAAACCA
TATGGATGTGAGCAGTGTGGGAAAACATTTCGATGTCGATCATTTCTTACTCAGCATCAAAGAATTCACA
CTGGAGAGAAACCTTATAAATGCAATGAATGTGGGAATTCCTTCCGCAATCACTCACATCTCACTGAACA
CCAGAGAATTCACACTGGAGAGAAACCTTATAAATGCAATAGGTGTGGGAAGGCATTCAATCAGAATACA
CACCTTATTCATCATCAGAGAATTCACACTGGTGAGAAGCCTTACATATGCAGTGAATGTGGCTCTTCTT
TTCGAAAACACTCAAATCTTACGCAACATCAGAGAATTCACACTGGGGAAAAACCCCATAAATGTGACGA
ATGTGGGAAAACTTTCCAAACAAAGGCAAACCTCTCTCAGCATCAGAGAATTCATAGTGGAGAGAAACCC
TATAAATGTAAAGAATGTGGCAAAGCCTTTTGTCAGAGCCCATCTCTTATTAAACACCAGCGAATTCATA
CTGGAGAAAAACCATATAAGTGTAAAGAATGTGGCAAAGCGTTTACTCAGAGCACCCCACTCACTAAACA
TCAGAGAATACATACAGGGGAGAGACCCTACAAATGCAGTGAATGTGGTAAAGCCTTCATTCAGAGCATT
TGCCTTATTCGGCACCAGAGAAGTCACACTGGAGAAAAACCCTATAAATGCAATGAATGTGGAAAGGGCT
TTAATCAGAACACCTGCCTCACTCAGCATATGAGAATTCATACTGGAGAGAAGCCCTATAAATGTAAAGA
ATGTGGGAAAGCCTTTGCTCATAGCTCATCTCTTACTGAACATCATAGAACTCACACTGGTGAGAAGCTC
TATAAATGTAGTGAGTGTGAGAAAACCTTCCGCAAGTATGCACACCTTAGTGAACATTACAGAATTCACA
CTGGTGAGAAGCCTTATGAGTGTATTGAGTGTGGAAAGTTCTTCAGACATAGTTCAGTCCTTTTCAGACA
TCAGAAACTTCACAGTGGTGACTAA

Translation (544 aa):
MLNMQGAEERDIRRETCPGWVNKNKPALEQDVCKIDSSGIVVKRFQEDEYQDSTFEEKYACEGMKENSPR
EIAESCLFQEGGFGRITFIHKEAPPEIISQGYNFEKSLLLTSSLVTRLRVSTEESLHQWETSNIQTNDIS
DQSKCPTLCTQKKSWKCNECGKTFTQSSSLTQHQRTHTGERPYTCEECGKAFSRSSFLVQHQRIHTGVKP
YGCEQCGKTFRCRSFLTQHQRIHTGEKPYKCNECGNSFRNHSHLTEHQRIHTGEKPYKCNRCGKAFNQNT
HLIHHQRIHTGEKPYICSECGSSFRKHSNLTQHQRIHTGEKPHKCDECGKTFQTKANLSQHQRIHSGEKP
YKCKECGKAFCQSPSLIKHQRIHTGEKPYKCKECGKAFTQSTPLTKHQRIHTGERPYKCSECGKAFIQSI
CLIRHQRSHTGEKPYKCNECGKGFNQNTCLTQHMRIHTGEKPYKCKECGKAFAHSSSLTEHHRTHTGEKL
YKCSECEKTFRKYAHLSEHYRIHTGEKPYECIECGKFFRHSSVLFRHQKLHSGD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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