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Report for CCDS47742.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47742.2 Public Homo sapiens 7 ATP6V0E2 24 110 108 CCDS HistoryNCBI Gene:155066Re-query CCDS DB by CCDS ID:47742.2Re-query CCDS DB by GeneID:155066See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 47742.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000421974.7 ENSP00000411672.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000421974.7Link to Ensembl Protein Viewer:ENSP00000411672.3Re-query CCDS DB by Nucleotide ID:ENST00000421974Re-query CCDS DB by Protein ID:ENSP00000411672
Original member Current member EBI ENST00000606024.5 ENSP00000475904.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000606024.5Link to Ensembl Protein Viewer:ENSP00000475904.1Re-query CCDS DB by Nucleotide ID:ENST00000606024Re-query CCDS DB by Protein ID:ENSP00000475904
Original member Current member NCBI NM_001100592.3 NP_001094062.2 Accepted alive Link to Nucleotide Sequence:NM_001100592.3Link to Protein Sequence:NP_001094062.2Re-query CCDS DB by Nucleotide ID:NM_001100592Re-query CCDS DB by Protein ID:NP_001094062Link to BLAST:NP_001094062.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001094062.2 164 Q8NHE4-2 164 100% 0 0

Chromosomal Locations for CCDS 47742.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 149874066 149874169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149875598 149875645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149879335 149879677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (495 nt):
ATGACGGCGCACTCATTCGCCCTCCCGGTCATCATCTTCACCACGTTCTGGGGCCTCGTCGGCATCGCCG
GGCCCTGGTTCGTGCCGAAGGGACCCAACCGCGGAGTGATCATCACCATGCTGGTCGCCACCGCCGTCTG
CTGTTACCTCTTGTGCCCAGCTCTCGGAATGACTGTGGCTCCACTGTCCCTGACAACCCCTTCGTCCGGA
CCCTCCCCCACACAACTATGTCTGGTCACCAGCTCCCTCCTGCTGGCACCCAGAGACCCGGACCCGCAGG
GCCTGCCTGGTTCCTGGAAGTCTTCCCAGTCTTCCCAGCCAGCCCGGGCCCTGGGGAGCCCTGGGCACAG
CAGCGGCCGAGGGGATGTCCTGCTCCAATACCCGCACTGCTCTGGAGTTTGCCCTCTTTCCCAAGGAGAT
GCTGCTGGGGAGCTGGTATGGGTGGGGTCTTTCCCTTTACAGACGGGGCAGATGCCAGGACTCAGCCCAT
CCTGA

Translation (164 aa):
MTAHSFALPVIIFTTFWGLVGIAGPWFVPKGPNRGVIITMLVATAVCCYLLCPALGMTVAPLSLTTPSSG
PSPTQLCLVTSSLLLAPRDPDPQGLPGSWKSSQSSQPARALGSPGHSSGRGDVLLQYPHCSGVCPLSQGD
AAGELVWVGSFPLQTGQMPGLSPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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