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Report for CCDS43866.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
43866.1 |
Public |
Homo sapiens |
9 |
RNF183 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:138065](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:43866.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:138065](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 9 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 43866.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000441031.3 |
ENSP00000417176.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000441031.3](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000417176.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000441031](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000417176](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000297894.5 |
ENSP00000417943.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000297894.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000417943.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000297894](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000417943](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000478815.1 |
ENSP00000419454.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000478815.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000419454.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000478815](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000419454](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000416588.2 |
ENSP00000420740.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000416588.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000420740.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000416588](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000420740](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000489339.2 |
ENSP00000508293.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000489339.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000508293.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000489339](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000508293](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001371234.1 |
NP_001358163.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001371234.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001358163.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001371234](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001358163](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001358163.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001371235.1 |
NP_001358164.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001371235.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001358164.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001371235](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001358164](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001358164.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001371236.1 |
NP_001358165.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001371236.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001358165.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001371236](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001358165](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001358165.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001371237.1 |
NP_001358166.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001371237.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001358166.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001371237](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001358166](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001358166.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001387568.1 |
NP_001374497.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001387568.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001374497.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001387568](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001374497](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001374497.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001387569.1 |
NP_001374498.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001387569.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001374498.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001387569](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001374498](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001374498.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_145051.5 |
NP_659488.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_145051.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_659488.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_145051](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_659488](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_659488.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 43866.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (579 nt): ATGGCTGAGCAGCAGGGCCGGGAGCTTGAGGCTGAGTGCCCCGTCTGCTGGAACCCCTTCAACAACACGT TCCATACCCCCAAAATGCTGGATTGCTGCCACTCCTTCTGCGTGGAATGTCTGGCCCACCTCAGCCTTGT GACTCCAGCCCGGCGCCGCCTGCTGTGCCCACTCTGTCGCCAGCCCACAGTGCTGGCCTCAGGGCAGCCT GTCACTGACTTGCCCACGGACACTGCCATGCTCGCCCTGCTCCGCCTGGAGCCCCACCATGTCATCCTGG AAGGCCATCAGCTGTGCCTCAAGGACCAGCCCAAGAGCCGCTACTTCCTGCGCCAGCCTCAAGTCTACAC GCTGGACCTTGGCCCCCAGCCTGGGGGCCAGACTGGGCCGCCCCCAGACACGGCCTCTGCCACCGTGTCT ACGCCCATCCTCATCCCCAGCCACCACTCTTTGAGGGAGTGTTTCCGCAACCCTCAGTTCCGCATCTTTG CCTACCTGATGGCCGTCATCCTCAGTGTCACTCTGTTGCTCATATTCTCCATCTTTTGGACCAAGCAGTT CCTTTGGGGTGTGGGGTGA
Translation (192 aa): MAEQQGRELEAECPVCWNPFNNTFHTPKMLDCCHSFCVECLAHLSLVTPARRRLLCPLCRQPTVLASGQP VTDLPTDTAMLALLRLEPHHVILEGHQLCLKDQPKSRYFLRQPQVYTLDLGPQPGGQTGPPPDTASATVS TPILIPSHHSLRECFRNPQFRIFAYLMAVILSVTLLLIFSIFWTKQFLWGVG
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