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Report for CCDS6020.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6020.1 Public Homo sapiens 8 DMTN 24 110 108 CCDS HistoryNCBI Gene:2039Re-query CCDS DB by CCDS ID:6020.1Re-query CCDS DB by GeneID:2039See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6020.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000265800.9 ENSP00000265800.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000265800.9Link to Ensembl Protein Viewer:ENSP00000265800.5Re-query CCDS DB by Nucleotide ID:ENST00000265800Re-query CCDS DB by Protein ID:ENSP00000265800
Original member Current member EBI ENST00000358242.6 ENSP00000350977.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358242.6Link to Ensembl Protein Viewer:ENSP00000350977.3Re-query CCDS DB by Nucleotide ID:ENST00000358242Re-query CCDS DB by Protein ID:ENSP00000350977
Original member Current member EBI ENST00000432128.6 ENSP00000416111.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000432128.6Link to Ensembl Protein Viewer:ENSP00000416111.1Re-query CCDS DB by Nucleotide ID:ENST00000432128Re-query CCDS DB by Protein ID:ENSP00000416111
Original member Current member EBI ENST00000523266.5 ENSP00000427866.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000523266.5Link to Ensembl Protein Viewer:ENSP00000427866.1Re-query CCDS DB by Nucleotide ID:ENST00000523266Re-query CCDS DB by Protein ID:ENSP00000427866
Original member Current member EBI ENST00000517305.5 ENSP00000430609.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000517305.5Link to Ensembl Protein Viewer:ENSP00000430609.2Re-query CCDS DB by Nucleotide ID:ENST00000517305Re-query CCDS DB by Protein ID:ENSP00000430609
Original member Current member NCBI NM_001114135.5 NP_001107607.1 Accepted alive Link to Nucleotide Sequence:NM_001114135.5Link to Protein Sequence:NP_001107607.1Re-query CCDS DB by Nucleotide ID:NM_001114135Re-query CCDS DB by Protein ID:NP_001107607Link to BLAST:NP_001107607.1
Original member Current member NCBI NM_001114136.3 NP_001107608.1 Accepted alive Link to Nucleotide Sequence:NM_001114136.3Link to Protein Sequence:NP_001107608.1Re-query CCDS DB by Nucleotide ID:NM_001114136Re-query CCDS DB by Protein ID:NP_001107608Link to BLAST:NP_001107608.1
Original member Current member NCBI NM_001323378.2 NP_001310307.1 Accepted alive Link to Nucleotide Sequence:NM_001323378.2Link to Protein Sequence:NP_001310307.1Re-query CCDS DB by Nucleotide ID:NM_001323378Re-query CCDS DB by Protein ID:NP_001310307Link to BLAST:NP_001310307.1
Original member Current member NCBI NM_001323379.2 NP_001310308.1 Accepted alive Link to Nucleotide Sequence:NM_001323379.2Link to Protein Sequence:NP_001310308.1Re-query CCDS DB by Nucleotide ID:NM_001323379Re-query CCDS DB by Protein ID:NP_001310308Link to BLAST:NP_001310308.1
Original member Current member NCBI NM_001323380.2 NP_001310309.1 Accepted alive Link to Nucleotide Sequence:NM_001323380.2Link to Protein Sequence:NP_001310309.1Re-query CCDS DB by Nucleotide ID:NM_001323380Re-query CCDS DB by Protein ID:NP_001310309Link to BLAST:NP_001310309.1
Original member Current member NCBI NM_001323381.2 NP_001310310.1 Accepted alive Link to Nucleotide Sequence:NM_001323381.2Link to Protein Sequence:NP_001310310.1Re-query CCDS DB by Nucleotide ID:NM_001323381Re-query CCDS DB by Protein ID:NP_001310310Link to BLAST:NP_001310310.1
Original member Current member NCBI NM_001323382.2 NP_001310311.1 Accepted alive Link to Nucleotide Sequence:NM_001323382.2Link to Protein Sequence:NP_001310311.1Re-query CCDS DB by Nucleotide ID:NM_001323382Re-query CCDS DB by Protein ID:NP_001310311Link to BLAST:NP_001310311.1
Original member Current member NCBI NM_001387727.1 NP_001374656.1 Accepted alive Link to Nucleotide Sequence:NM_001387727.1Link to Protein Sequence:NP_001374656.1Re-query CCDS DB by Nucleotide ID:NM_001387727Re-query CCDS DB by Protein ID:NP_001374656Link to BLAST:NP_001374656.1
Original member Current member NCBI NM_001387730.1 NP_001374659.1 Accepted alive Link to Nucleotide Sequence:NM_001387730.1Link to Protein Sequence:NP_001374659.1Re-query CCDS DB by Nucleotide ID:NM_001387730Re-query CCDS DB by Protein ID:NP_001374659Link to BLAST:NP_001374659.1
Original member Current member NCBI NM_001387732.1 NP_001374661.1 Accepted alive Link to Nucleotide Sequence:NM_001387732.1Link to Protein Sequence:NP_001374661.1Re-query CCDS DB by Nucleotide ID:NM_001387732Re-query CCDS DB by Protein ID:NP_001374661Link to BLAST:NP_001374661.1
Original member Current member NCBI NM_001387735.1 NP_001374664.1 Accepted alive Link to Nucleotide Sequence:NM_001387735.1Link to Protein Sequence:NP_001374664.1Re-query CCDS DB by Nucleotide ID:NM_001387735Re-query CCDS DB by Protein ID:NP_001374664Link to BLAST:NP_001374664.1
Original member Current member NCBI NM_001387750.1 NP_001374679.1 Accepted alive Link to Nucleotide Sequence:NM_001387750.1Link to Protein Sequence:NP_001374679.1Re-query CCDS DB by Nucleotide ID:NM_001387750Re-query CCDS DB by Protein ID:NP_001374679Link to BLAST:NP_001374679.1
Original member Current member NCBI NM_001387751.1 NP_001374680.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001387751.1Link to Protein Sequence:NP_001374680.1Re-query CCDS DB by Nucleotide ID:NM_001387751Re-query CCDS DB by Protein ID:NP_001374680Link to BLAST:NP_001374680.1
Original member Current member NCBI NM_001387753.1 NP_001374682.1 Accepted alive Link to Nucleotide Sequence:NM_001387753.1Link to Protein Sequence:NP_001374682.1Re-query CCDS DB by Nucleotide ID:NM_001387753Re-query CCDS DB by Protein ID:NP_001374682Link to BLAST:NP_001374682.1
Original member Current member NCBI NM_001978.5 NP_001969.2 Accepted alive Link to Nucleotide Sequence:NM_001978.5Link to Protein Sequence:NP_001969.2Re-query CCDS DB by Nucleotide ID:NM_001978Re-query CCDS DB by Protein ID:NP_001969Link to BLAST:NP_001969.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001107607.1 405 Q08495-1 405 100% 0 0
NP_001107608.1 405 Q08495-1 405 100% 0 0
NP_001310307.1 405 Q08495-1 405 100% 0 0
NP_001310308.1 405 Q08495-1 405 100% 0 0
NP_001310309.1 405 Q08495-1 405 100% 0 0
NP_001310310.1 405 Q08495-1 405 100% 0 0
NP_001310311.1 405 Q08495-1 405 100% 0 0
NP_001374656.1 405 Q08495-1 405 100% 0 0
NP_001374659.1 405 Q08495-1 405 100% 0 0
NP_001374661.1 405 Q08495-1 405 100% 0 0
NP_001374664.1 405 Q08495-1 405 100% 0 0
NP_001374679.1 405 Q08495-1 405 100% 0 0
NP_001374680.1 405 Q08495-1 405 100% 0 0
NP_001374682.1 405 Q08495-1 405 100% 0 0
NP_001969.2 405 Q08495-1 405 100% 0 0

Chromosomal Locations for CCDS 6020.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 22066876 22066893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22067085 22067159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22067527 22067682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22069016 22069060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22069419 22069518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22069881 22069937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22070182 22070334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22072326 22072450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22073730 22073835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22080180 22080244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22080412 22080460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22080618 22080625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22080805 22080870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22081113 22081193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22081350 22081463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1218 nt):
ATGGAACGGCTGCAGAAGCAACCACTTACCTCCCCCGGGAGCGTGAGCCCCTCCCGAGATTCCAGTGTGC
CTGGCTCTCCCTCCAGCATCGTGGCCAAGATGGACAATCAGGTGCTGGGCTACAAGGACCTGGCTGCCAT
CCCCAAGGACAAGGCCATCCTGGACATCGAGCGGCCCGACCTCATGATCTACGAGCCTCACTTCACTTAT
TCCCTCCTGGAACACGTGGAGCTGCCTCGCAGCCGCGAGCGCTCGCTGTCACCCAAATCCACATCCCCCC
CACCATCCCCAGAGGTGTGGGCGGACAGCCGGTCGCCTGGAATCATCTCTCAGGCCTCGGCCCCCAGAAC
CACTGGAACCCCCCGGACCAGCCTGCCCCATTTCCACCACCCTGAGACCTCCCGCCCAGATTCCAACATC
TACAAGAAGCCTCCCATCTATAAGCAGAGAGAGTCCGTGGGAGGCAGCCCTCAGACCAAGCACCTCATCG
AGGATCTCATCATCGAGTCATCCAAGTTTCCTGCAGCCCAGCCCCCAGACCCCAACCAGCCAGCCAAAAT
CGAAACCGACTACTGGCCATGCCCCCCGTCTCTGGCTGTTGTGGAGACAGAATGGAGGAAGCGGAAGGCG
TCTCGGAGGGGAGCAGAGGAAGAGGAGGAGGAGGAAGATGACGACTCTGGAGAGGAGATGAAGGCTCTCA
GGGAGCGTCAGAGAGAGGAACTCAGTAAGGTTACTTCCAACTTGGGAAAGATGATCTTGAAAGAAGAGAT
GGAAAAGTCATTGCCGATCCGAAGGAAAACCCGCTCTCTGCCTGACCGGACACCCTTCCATACCTCCTTG
CACCAGGGAACGTCTAAATCTTCCTCTCTCCCCGCCTATGGCAGGACCACCCTGAGCCGGCTACAGTCCA
CAGAGTTCAGCCCATCAGGGAGTGAGACTGGAAGCCCAGGCCTGCAGAACGGAGAGGGCCAGAGGGGGAG
GATGGACCGGGGGAACTCCCTGCCCTGTGTGCTGGAGCAGAAGATCTATCCCTATGAAATGCTAGTGGTG
ACCAACAAGGGGCGAACCAAGCTGCCACCGGGGGTGGATCGGATGCGGCTTGAGAGGCATCTGTCTGCCG
AGGACTTCTCAAGGGTATTTGCCATGTCCCCTGAAGAGTTTGGCAAGCTGGCTCTGTGGAAGCGGAATGA
GCTCAAGAAGAAGGCCTCTCTCTTCTGA

Translation (405 aa):
MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPDLMIYEPHFTY
SLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGTPRTSLPHFHHPETSRPDSNI
YKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPDPNQPAKIETDYWPCPPSLAVVETEWRKRKA
SRRGAEEEEEEEDDDSGEEMKALRERQREELSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSL
HQGTSKSSSLPAYGRTTLSRLQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPYEMLVV
TNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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