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Report for CCDS48849.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48849.1 Public Mus musculus 11 Wdr81 23 108 98 CCDS HistoryNCBI Gene:192652Re-query CCDS DB by CCDS ID:48849.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 48849.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000173320.7 ENSMUSP00000134266.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000173320.7Link to Ensembl Protein Viewer:ENSMUSP00000134266.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000173320Re-query CCDS DB by Protein ID:ENSMUSP00000134266
Original member Current member NCBI NM_138950.2 NP_620400.2 Accepted alive Link to Nucleotide Sequence:NM_138950.2Link to Protein Sequence:NP_620400.2Re-query CCDS DB by Nucleotide ID:NM_138950Re-query CCDS DB by Protein ID:NP_620400Link to BLAST:NP_620400.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_620400.2 1934 Q5ND34-1 1934 100% 0 0

Chromosomal Locations for CCDS 48849.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 75441769 75442089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75444255 75444434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75444698 75444843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75445404 75446093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75447864 75448029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75448123 75448288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75449025 75449215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75449346 75449536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75449796 75449903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75450794 75454439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5805 nt):
ATGGCCCAGGGGAGCAGAAGGCGGAAAGTGGTTCTTACAGCAGGGTCCGAGGGCTGGTCCCCTTCCTCAG
GACCTGACATGGAGGAGCTGCTCCGGAGCGTGGAGAGAGATCTGAACATTGATGCCCGGCAGCTGGCCCT
GGCGCCGGGGGGCACTCATGTAGTGGCCCTAGTGTCCACGCGTTGGCTGGCTAGTCTCCGGGAGCGCCGA
CTGGGACCCTGTCCCCGGGCTGAGGGCCTGGGTGAAGCAGAAGTCAGGACTTTACTGCAACGTTCGGTAC
AGAGGCTGCCCCCAGGCTGGACTCGAGTGGAGGTGCATGGGCTGCGGAAACGGAGACTGTCCTACCCGCT
GGGTGGAGGCGTGCCCTTTGAGGAGGGGTCCTGTAGCCCTGAAACTCTCACTCGGTTCATGCAGGAGGTG
GCTGCCCAGAATTACCGGAACCTGTGGCGCCATGCATACCACACTTATGGACAGCCTTACAGCCACAGCA
CTGCCCCCTCAGCTCTACCTGCCCTAGACTCTATACGACAAGCTCTCCAGAGGGTGTATGGATGCACCTT
CTTGCCAGTGGGTGAATCCATCCCATGTCTATCAAATGTCAGGGATGGGCCCTGCCCCTCTCGGGGCAGC
CCTGCCTGCCCCAGCCTTTTGCGAGCTGAGGCTTTGCTGGAGTCGCCCGAGATGCTCTATGTGGTACACC
CTTATGTGCAATTCTCCCTGCATGATGTAGTTACCTTCAGCCCTGCCAAGCTGACCAACAGCCAAGCCAA
GGTGCTCTTTCTTCTCTTCCGTGTTCTGAGGGCCATGGATGCCTGTCACCGCCAGGGGCTGGCCTGTGGG
GCTCTGTCTTTGCACCACATTGCTGTAGACGAGAAGCTATGCAGTGAGCTCCGGCTGGACCTGAGCGCTT
ACGAGATGCCTTCCGAGGATGAAAACCAGGAGGGCTCTGAAGAGAAAAATGGGACAGGCATTAAGTCTGA
AAAAGAGGGGGAAGGGAGAACTGAGTGTCCCACCTGCCAGAAAGAACTTCGGGGCCTTGTGCTAGACTGG
GTCCATGGCCGAATCAGCAACTTCCACTACCTCATGCAGCTGAATCGGTTGGCAGGTCGACGGCAGGGGG
ATCCCAACTATCACCCAGTGCTGCCCTGGGTGGTGGACTTTACCACACCTTATGGGCGCTTCCGAGACCT
TCGTAAATCCAAGTTCCGACTCAACAAGGGAGATAAGCAATTGGACTTCACCTATGAGATGACCCGGCAG
GCATTTGTTGCAGGTGGTGCAGGAAGTGGGGAGCCACCCCATGTTCCTCACCACATCTCTGACGTGCTCT
CTGACATCACGTACTATGTATACAAGGCCCGTCGCACACCGCGCTCGGTGCTCTGTGGACATGTCCGAGC
GCAGTGGGAACCCCACGAGTATCCTGCCACCATGGAGCGGATGCAGACCTGGACACCGGATGAGTGCATA
CCCGAGTTCTACACGGACCCCTCTATCTTTTGCTCTATCCACCCTGACATGCCCGACCTGGATGTGCCGG
CCTGGTGCAGTTCTAACCAGGAATTTGTGGCTGCCCATCGAGCCCTCCTGGAGAGCTGGGAGGTGTCCCA
AGACCTGCATCACTGGATTGATCTTACCTTTGGCTACAAACTCCAGGGCAAAGAAGCTGTGAAGGAGAAG
AATGTGTGTCTGCACCTGGTGGACGCTCACACCCATCTGACCAGCTATGGCGTGGTACAGCTATTTGATC
AGCCACACCCCCAACGCCTGGCTGGATCTCCTGCCCTGGCCCCTGAACCTCCACTCATCCCCCGGCTGTT
GGTCCAGCCTATTCGGGAGGCCACAGGCCAGGAGGACATTTCAGGACAACTTATAAATGGTGCGGGCAGG
CTTGTCGTAGAGGCCACTCCATGTGAGACTGGCTGGACTAGAGATAGGCCTGGGACAGGAGAAGATGATT
TAGAACAGGCTACAGAAGCTCTGGATTCCATCTCCCTCCCCGGGAAAGCAGGTGACCAGCCAGGCTCTTC
CTCCAGTCAAGCATCACCTGGCCTGTTGTCTTTTTCTGCACCCTCGGGGTCTCGACCAGGCCGTAGGAGC
AAAGCTGCCGGGTTGGACCCTGGGGAGGGTGAAGAGGGCAAGATTGTCCTTCCAGAGGGCTTCAGTCCCA
TACAGGCCTTGGAAGAGCTGGAGAAAGTGGGTAACTTCCTGGCCAAAGGCCTAGGGAGCCAGTTGGAGGA
GCCTGAAAAGCCTCACGCCCAGCCACCTGTGCACCTGCAGAGCCTCTTCCATCGAGACATGCAGGTCCTG
GGTGTCCTGTTGGCTGAGATGGTGTTTGCCACCAGGGTCCGGATACTGCAGCCTGATGCACCTTTGTGGG
TACGCTTTGAGGCTGTTCGGGGTCTCTGCATACGCCACTCCAAGGACATCCCCGTGTCTCTGCAGCCTGT
GCTAGACACACTCCTACAGCTGAGCGGACCCAAAAGTCCCATGGTGTCGAAGAAGGGCAAGCTAGACCCA
CTGTTTGAGTATAGGCCGGTTTCCCAGGGATTACCCCCACCCAGCCCAGCCCAGCTCCTCAGCCCCTTCA
GCTCCGTGGTCCCCTTCCCTCCATACTTCCCAGCACTGCACAAGTTCATTCTTTTATATCAGGCCCGGCG
TGTGGAGGATGAGGTCCAGGGTCGGGAGCTGGCGTTTGCTCTGTGGCAGCAGCTGGGTGCGGTGTTAAAT
GACATCACTCCCGAGGGCTTAGAGATCCTCCTGCCTTTCGTGCTGTCGCTCATGTCTGAGGAGCACACGG
CTGTGTACACAGCCTGGTACCTATTTGAACCCGTTGCCAAGGCCCTGGGCCCCAAAAATGCCAACAAGTA
CCTCCTGAAGCCTCTCATCGGTGCCTATGAGAGCCCCTGCCGCCTGCATGGCCGCTTCTACCTGTACACC
GACTGTTTTGTGGCCCAGTTGGTGGTGCGGCTGGGCTTGCAGGCCTTCCTCACCCACCTGCTGCCCCATG
TCCTCCAGGTACTGGCTGGGGTGGAGGCTTCCCAGGAGGAGGGCAAAGGCCTGGTCGGGACCACTGAGGA
TGAGGAAAGTGAGCTCCCGGTGTCCGGGCCTGGCTCCTGTGCCTTTGGGGAAGAGATTCAGATGGATGGG
CAGCCGGCTGCTTCCTCAGGACTGGGGCTCCCAGACTACAGGTCGGGCGTCAGCTTCCATGACCAGGCCG
ACCTGCCGGACACGGAGGACTTCCAAGCTGGACTCTACGTGGCTGAATCTCCACAGCCCCAGGAGGCTGA
GGCCGTGAGCCTGGGCCAGCTGAGTGATAAGAGCAGTACCAGCGAAGCCTCCCAGGGCGAGGAGAGGGGT
GGGGATGATGGCGGTGCCCCTGCGGACAAGAACAGCGTCAAGTCAGGGGACAGCAGCCAGGACTTGAAGC
AGAGCGAAGGCTCTGAGGAAGAGGAGGAGGAGGAAGGCTGTGTGGTGTTGGAGGAGGACCAGGAGGATGA
AGTCACGGGAACATCCGAGCTCACTCTGTCTGACACGATGCTGTCCATGGAGACGGTGGTGGCTCCTGGT
GATGGGAGAGACAGAGAAGAGGAAGAGGAGCCGCTGACAGAGCAGACAGAAGGCAAAGAACAAAAGATCC
TCCTTGATACAGCCTGCAAGATGGTCCGCTGGCTGTCTGCCAAGCTTGGCCCCACAGTAGCCTCTCGCCA
TGTGGCCCGGAACCTGCTGCGCCTGCTGACATCTTGTTATGTTGGGCCCACTCGACAGCAGTTCACCGTC
AGCAGTGATGACACCCCTCCACTGAATGCCGGCAACATCTACCAGAAGAGGCCAGTCCTAGGTGACATCG
TGTCGGGGCCTGTGCTCAGCTGCCTCCTCCACATTGCCTACCTGTATGGAGAACCCGTTCTCACCTACCA
GTACCTGCCCTACATCAGCTACCTGGTAGCCCCAGGGAGCAACTCAAACCCCAGCCGACTGAACAGCCGC
AAGGAGGCCGGGCTGCTGGCAGCGGTGACACTGACGCAGAAAATCATCGTATACCTCTCTGACACGACCC
TCATGGACATTCTGCCCCGCATTAGCCACGAGGTCTTGCTGCCTGTGCTTGGCTTCCTCACCTCCTTCGT
CACAGGGTTCCCCAGTGGGGCCCAGGCCCGGACTGTCCTATGCGTGAAAACCATCAGTCTCATCGCCCTC
ATCTGCTTGCGCATCGGGCAGGAGATGGTCCAGCAGCACCTGAGTGAGCCAGTGGCCACCTTCTTCCAAG
TCTTCTCTCATCTGCATGAGCTTCGGCAGCAGGATCTGCCACTGGATCCTAAGGGCTGTACTGAGGGCCA
GCTGCCAGAGGCGACCTTCTCTGATGGGCAGCGACGACCAGTGGACCCCACCCTGCTGGAAGAGCTGCAG
AAGGTGTTCACCCTGGAAATGGCGTACACAATCTACGTACCTTTCTCCTGCCTGTTGGGTGACATCATCC
GGAAAATCATCCCCAACCATGAGTTGGTCGGGGAGCTGGCAGGGCTCTATCTGGAAAGCATGAGCCCGAG
CTCTCGAAACCCAGCCAGCATGGAACCCACCATGGCTAGTGCCGGCCCTGAATGGGACCCTCAGAGTGGG
AGCTGTCTCCAGGACGATGGCCACTCAGGGACCTTTGGGAGTGTCCTGGTTGGAAATCGCATCCAGATCC
CTGACTCTCAGCCCCAGAGTCCTGGGCCACTGGGCTCCCTCTCTGGAGTGGGTAGTAGCGGAGGCCTCAG
CAACAGGAATGAAGACAACGCCCTGAAGCGGGAGCTGCCTCGGAGTGCCCATGGGCTGAGCGGGAACTGG
CTGGCGTACTGGCAGTACGAGATCGGTGTGAGCCAGCAGGATGCCCACTTCCACTTCCACCAGATCCGCC
TGCAGAGCTTCCCAGGGCACACGGGGGCCGTCAAATGCGTGGCCGCCCTGAGCAGTGAAGACTTCTTTCT
GAGTGGCAGCAAGGACCGGACTGTGCGCCTCTGGCCGCTGTACAACTATGGGGACGGGACCAATGAGACG
GCTTCCCGCCTCATCTATGCCCAGCACCGCAAAAGCGTCTTCTACGTGGGCCAGCTTGAGGCCCCGCAGT
ATGTGGTGAGCTGTGATGGGGCAGTGCACGTCTGGGACCCCTTCACAGGAAAGACCCTTCGCACAGTGGA
TCCTTCAGACAGCCGGGTGCCCCTGACGGCTGTGGCTGTCATGCCTGCCCCACACACCAGCATCACCATG
GCCAGCTCCGACTCCACTCTGCGCTTTGTGGACTGCAGGAAGCCAGGCTTGCAGCATGAGTTCCGACTGG
GTGGAGGGCTGAACCCTGGGCTTGTTCGCTCGTTGGCCGTCAGCCCCAGTGGCCGGAGTGTTGTGGCTGG
CTTCTCCTCGGGCTTCATGGTGCTCCTAGATACCCGCACGGGCCTGGTTCTACGAGGCTGGCCAGCCCAT
GAAGGGGACATTCTACAGATCAAGGCTGTAGAGGGCAGCGTGCTCATCAGCTCCTCTTCCGACCATTCCT
TGACTGTTTGGAAGGAGCTGGAACAGAAGCCCACGCACCACTACAAGTCAGCGTCCGACCCAATCCACAC
CTTTGACCTGTACGGCAGCGAGGTGGTCACCGGCACTGTAGCCAACAAGATTGGTGTCTGTTCCCTGCTT
GAGCCACCCTCTCAGGCCACCACAAAGCTCAGTTCCGAGAACTTCCGTGGCACGCTCACTAGTCTGGCTT
TGCTGCCCACGAAACGCCACCTCCTGCTGGGCTCGGACAATGGCATCATCCGCCTCCTGGCATAG

Translation (1934 aa):
MAQGSRRRKVVLTAGSEGWSPSSGPDMEELLRSVERDLNIDARQLALAPGGTHVVALVSTRWLASLRERR
LGPCPRAEGLGEAEVRTLLQRSVQRLPPGWTRVEVHGLRKRRLSYPLGGGVPFEEGSCSPETLTRFMQEV
AAQNYRNLWRHAYHTYGQPYSHSTAPSALPALDSIRQALQRVYGCTFLPVGESIPCLSNVRDGPCPSRGS
PACPSLLRAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFLLFRVLRAMDACHRQGLACG
ALSLHHIAVDEKLCSELRLDLSAYEMPSEDENQEGSEEKNGTGIKSEKEGEGRTECPTCQKELRGLVLDW
VHGRISNFHYLMQLNRLAGRRQGDPNYHPVLPWVVDFTTPYGRFRDLRKSKFRLNKGDKQLDFTYEMTRQ
AFVAGGAGSGEPPHVPHHISDVLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPATMERMQTWTPDECI
PEFYTDPSIFCSIHPDMPDLDVPAWCSSNQEFVAAHRALLESWEVSQDLHHWIDLTFGYKLQGKEAVKEK
NVCLHLVDAHTHLTSYGVVQLFDQPHPQRLAGSPALAPEPPLIPRLLVQPIREATGQEDISGQLINGAGR
LVVEATPCETGWTRDRPGTGEDDLEQATEALDSISLPGKAGDQPGSSSSQASPGLLSFSAPSGSRPGRRS
KAAGLDPGEGEEGKIVLPEGFSPIQALEELEKVGNFLAKGLGSQLEEPEKPHAQPPVHLQSLFHRDMQVL
GVLLAEMVFATRVRILQPDAPLWVRFEAVRGLCIRHSKDIPVSLQPVLDTLLQLSGPKSPMVSKKGKLDP
LFEYRPVSQGLPPPSPAQLLSPFSSVVPFPPYFPALHKFILLYQARRVEDEVQGRELAFALWQQLGAVLN
DITPEGLEILLPFVLSLMSEEHTAVYTAWYLFEPVAKALGPKNANKYLLKPLIGAYESPCRLHGRFYLYT
DCFVAQLVVRLGLQAFLTHLLPHVLQVLAGVEASQEEGKGLVGTTEDEESELPVSGPGSCAFGEEIQMDG
QPAASSGLGLPDYRSGVSFHDQADLPDTEDFQAGLYVAESPQPQEAEAVSLGQLSDKSSTSEASQGEERG
GDDGGAPADKNSVKSGDSSQDLKQSEGSEEEEEEEGCVVLEEDQEDEVTGTSELTLSDTMLSMETVVAPG
DGRDREEEEEPLTEQTEGKEQKILLDTACKMVRWLSAKLGPTVASRHVARNLLRLLTSCYVGPTRQQFTV
SSDDTPPLNAGNIYQKRPVLGDIVSGPVLSCLLHIAYLYGEPVLTYQYLPYISYLVAPGSNSNPSRLNSR
KEAGLLAAVTLTQKIIVYLSDTTLMDILPRISHEVLLPVLGFLTSFVTGFPSGAQARTVLCVKTISLIAL
ICLRIGQEMVQQHLSEPVATFFQVFSHLHELRQQDLPLDPKGCTEGQLPEATFSDGQRRPVDPTLLEELQ
KVFTLEMAYTIYVPFSCLLGDIIRKIIPNHELVGELAGLYLESMSPSSRNPASMEPTMASAGPEWDPQSG
SCLQDDGHSGTFGSVLVGNRIQIPDSQPQSPGPLGSLSGVGSSGGLSNRNEDNALKRELPRSAHGLSGNW
LAYWQYEIGVSQQDAHFHFHQIRLQSFPGHTGAVKCVAALSSEDFFLSGSKDRTVRLWPLYNYGDGTNET
ASRLIYAQHRKSVFYVGQLEAPQYVVSCDGAVHVWDPFTGKTLRTVDPSDSRVPLTAVAVMPAPHTSITM
ASSDSTLRFVDCRKPGLQHEFRLGGGLNPGLVRSLAVSPSGRSVVAGFSSGFMVLLDTRTGLVLRGWPAH
EGDILQIKAVEGSVLISSSSDHSLTVWKELEQKPTHHYKSASDPIHTFDLYGSEVVTGTVANKIGVCSLL
EPPSQATTKLSSENFRGTLTSLALLPTKRHLLLGSDNGIIRLLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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