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Report for CCDS36734.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36734.1 Public Mus musculus 13 Ell2 23 108 98 CCDS HistoryNCBI Gene:192657Re-query CCDS DB by CCDS ID:36734.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36734.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000001583.7 ENSMUSP00000001583.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000001583.7Link to Ensembl Protein Viewer:ENSMUSP00000001583.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000001583Re-query CCDS DB by Protein ID:ENSMUSP00000001583
Original member Current member NCBI NM_138953.2 NP_620403.2 Accepted alive Link to Nucleotide Sequence:NM_138953.2Link to Protein Sequence:NP_620403.2Re-query CCDS DB by Nucleotide ID:NM_138953Re-query CCDS DB by Protein ID:NP_620403Link to BLAST:NP_620403.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_620403.2 639 Q3UKU1 639 100% 0 0

Chromosomal Locations for CCDS 36734.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 75707651 75707797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 75724953 75725000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 75746292 75746413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 75749925 75750088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 75756275 75756534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 75761878 75762002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 75762145 75762229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 75763548 75764115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 75766154 75766220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 75769539 75769710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 75770546 75770590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 75770680 75770796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1920 nt):
ATGGCGGCGGGGGGGGCTGCGGGACTGCGGGAGGAGCAGCGGTACGGGCTGGCGTGCGGGCGGCTGGGGC
AGGACAACATCACCGTGCTGCATGTGAAGCTCACCGAGACGGCGATCCGGGCGCTGGAGACTTACCAGAG
CCACAAGAATTTAATTCCTTTTAGACCTTCAATTCAGTTCCAAGGACTCCAAGGGCTTATGAAAATTCCC
AAAAATGATCCCTTCAATGAAGTCCAGAACTTTAACTTCTACTTGTCAAACGTGGGAAGAGATAATCCTC
AGGGCAGCTTTGACTGCATCCAGCAAACACTCTCTAGCTCTGGAGCCTCCCAGCTCAATTGCCTGGGATT
TATACAAGATAAAATTACAGTGTGTGCAACAAATGATTCCTATCAGATGACGCGAGAAAGAATGACCCAG
GCAGAGGAGGAATCCCGTAATCGAAGCACAAAAGTTATCAAACCCGGTGGACCATATGTAGGGAAAAGAG
TGCAAATTCGTAAAGCTCCTCAAGCCATCTCGGACACAGTGCCTGAGAGGAAAAGGTCAACGCCCATGAA
CCCTGCAAATACAATTCGAAAGATGCATAGTGGCAACAGTGTCTCTCAGAGGCCATACAGGGACAGGGTC
ATCCATTTACTGGCACTAAAAGCCTACAAGAAACCTGAGCTGCTTGCTCGACTGCAGAAAGATGGTGTCA
ATCAAAAAGACAAGAACTCCTTGGGAGCAATTCTGCAACAGGTGGCCAATCTGAATCCTAAGGACCTCTC
CTATACTTTAAAGGATTATGTATTTAAGGAGCTCCAGCGAGACTGGCCAGGTTACAGTGAGACAGACAGA
CAGACATTGGATTTGGTGCTCTCTAGAAAACTAAATCCATCTCAGAATGCTAGCACCAGCCGGTCAGAGT
CTCCCCTGTGTTCCAGCAAAGACGCTGCCTCATCTCCTCAGAAACGACCTTTGGATTCAGATTTCATTGA
TCCTTTAATGAACAAAAAAGCTCGAATATCTCACCTAACAAACAGAGTCCCACCGACATTAAATGGTTAT
TTGAATCCCACCAGTGAAAAATCTTGTGCAGGCCTCCTACCACCCCCTGCAGCTGCTGCCATCCCCACCC
TCTCGCCGCTGCCTTCAACCCACCTGCCTGTCTCCAATCCTCCTCAGACTGTAAATTCCAACTCCAATTC
CCCTAGCACTCCAGAAGGCCTGGGGACTCAAGACCTGCCTGTTGACAGTTTTAGTCAAAATGGTAGCATC
TTTGAGGACCAGCAAGAAAAATATACCTCAAGGACTTGTCTGGAAACATTACCCCCCAGCTCAGCTCTGC
TAAAGTGTCCAAAGCCCATGGAAGAAGAGCATCCAGTGTCTCACAAAAAGTCCAAAAAGAAGTCTAAAAA
ACACAAGGAAAAGGACCAAATAAAGAAACTTGACATTGAGACCATGGAGGAGAAGGAGGAAGACCTTCAG
AGAGAAGAAACTGCCAAGCTGAGTAATGCCAGTCCAAATCCCAATGAAGGAGTTAAAGAAGGGTGCACAG
CCTCCATGGAGCCTTCTTCAGCACTTGAACTCCCAGATTATTTGATAAAATATATTGCTATTGTCTCTTA
TGAGCAACGCCAGAATTACAAGGATGACTTCAATGCTGAGTATGATGAATACAGAGCTTTGCATGCAAGG
ATGGAGACTGTAGCCAGGAGATTTATTAAACTGGATGCACAACGAAAACGCCTTTCTCCGGGTTCAAAAG
AGTACCAGAATGTTCATGAAGAAGTCTTACAGGAATATCAGAAGATCAAGCAGTCCAGTCCCAATTACCA
TGAAGAAAAATACAGATGTGAATATCTTCATAACAAGCTGGCTCACATCAAAAGACTAATAGGTGAATTT
GACCAACAGCAAGCAGAGTCATGGCACTAA

Translation (639 aa):
MAAGGAAGLREEQRYGLACGRLGQDNITVLHVKLTETAIRALETYQSHKNLIPFRPSIQFQGLQGLMKIP
KNDPFNEVQNFNFYLSNVGRDNPQGSFDCIQQTLSSSGASQLNCLGFIQDKITVCATNDSYQMTRERMTQ
AEEESRNRSTKVIKPGGPYVGKRVQIRKAPQAISDTVPERKRSTPMNPANTIRKMHSGNSVSQRPYRDRV
IHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKELQRDWPGYSETDR
QTLDLVLSRKLNPSQNASTSRSESPLCSSKDAASSPQKRPLDSDFIDPLMNKKARISHLTNRVPPTLNGY
LNPTSEKSCAGLLPPPAAAAIPTLSPLPSTHLPVSNPPQTVNSNSNSPSTPEGLGTQDLPVDSFSQNGSI
FEDQQEKYTSRTCLETLPPSSALLKCPKPMEEEHPVSHKKSKKKSKKHKEKDQIKKLDIETMEEKEEDLQ
REETAKLSNASPNPNEGVKEGCTASMEPSSALELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHAR
METVARRFIKLDAQRKRLSPGSKEYQNVHEEVLQEYQKIKQSSPNYHEEKYRCEYLHNKLAHIKRLIGEF
DQQQAESWH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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