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Report for CCDS91528.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91528.1 Public Homo sapiens 11 XNDC1N 24 110 108 CCDS HistoryNCBI Gene:100133315Re-query CCDS DB by CCDS ID:91528.1Re-query CCDS DB by GeneID:100133315See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91528.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000679412.2 ENSP00000506430.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000679412.2Link to Ensembl Protein Viewer:ENSP00000506430.1Re-query CCDS DB by Nucleotide ID:ENST00000679412Re-query CCDS DB by Protein ID:ENSP00000506430
Original member Current member NCBI NM_001375847.2 NP_001362776.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001375847.2Link to Protein Sequence:NP_001362776.1Re-query CCDS DB by Nucleotide ID:NM_001375847Re-query CCDS DB by Protein ID:NP_001362776Link to BLAST:NP_001362776.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001362776.1 234 Q6ZNB5-1 234 100% 0 0

Chromosomal Locations for CCDS 91528.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 71884439 71884621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 71916074 71916252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 71917621 71917776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 71918885 71919026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 71923309 71923353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (705 nt):
ATGGCTCCTGTGAAGATCAGCCATGTGGTATCATTTTCTTCTCAGGATCCCAAGTATCCTGTAGAGAACT
TGCTAAACCCAGATAGTCCAAGGAGACCTTGGCTCGGCTGCCCTCAGGACAAGAGTGGGCAATTGAAAGT
AGAACTACAGCTGGAGAGGGCAGTGCCCACTGGCTACATTGATGTGGGTAACTGTGGCTGTGCGTTCCTG
CAAATTGATGTGGGCCATTCTTCCTGGCCCCTGGACAGACCTTTCATAACCCTGCTCCCTGCAACCACGC
TAATGTCTCTAACTGATTCAAAGCAGGGGAAGAACCGCTCCGGGGTCCGCATGTTTAAAGATGTTGATTT
CCTGGCTCCAGCCTCAGGAGAGTTATGGGATCGACTTCGCCTGACCTGCTCCCGACCCTTCACGCGTCAT
CAGTCCTTTGGCCTGGCCTTTCTACGGGTGTGTTCTTCTCTGGACTCCTTAGATGACTCTGTGGTGGGTC
CCTCAGCCCTTCTGAGCTCTGTGCTGAACAAGATAAGAGAGTTTAAGACATGTTTTTTCTCCTGGAGTCT
GAAGAAGATGGAGTTAGAATTTTCACCACTTCTTTTGTCCATCAATTTGAATGATCTTCAGTTTGCAGCA
GATGCTGAAGTCAGCACAGTATCTAATTGCATGTTCATCAGCATTGCACTTCAGTCTGCAATGATAATAT
TCTGA

Translation (234 aa):
MAPVKISHVVSFSSQDPKYPVENLLNPDSPRRPWLGCPQDKSGQLKVELQLERAVPTGYIDVGNCGCAFL
QIDVGHSSWPLDRPFITLLPATTLMSLTDSKQGKNRSGVRMFKDVDFLAPASGELWDRLRLTCSRPFTRH
QSFGLAFLRVCSSLDSLDDSVVGPSALLSSVLNKIREFKTCFFSWSLKKMELEFSPLLLSINLNDLQFAA
DAEVSTVSNCMFISIALQSAMIIF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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