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Report for CCDS15069.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15069.1 Public Mus musculus 1 Resp18 23 108 98 CCDS HistoryNCBI Gene:19711Re-query CCDS DB by CCDS ID:15069.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15069.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000039534.10 ENSMUSP00000043783.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000039534.10Link to Ensembl Protein Viewer:ENSMUSP00000043783.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000039534Re-query CCDS DB by Protein ID:ENSMUSP00000043783
Original member Current member NCBI NM_009049.2 NP_033075.1 Accepted alive Link to Nucleotide Sequence:NM_009049.2Link to Protein Sequence:NP_033075.1Re-query CCDS DB by Nucleotide ID:NM_009049Re-query CCDS DB by Protein ID:NP_033075Link to BLAST:NP_033075.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033075.1 175 P47939 175 100% 0 0

Chromosomal Locations for CCDS 15069.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 75272311 75272361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75273957 75274046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75274168 75274210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75274397 75274529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75275613 75275717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75278202 75278307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (528 nt):
ATGCAGAGTTCGTTAAAGCCCGCGGGCTCCGGGCATCTTCAGCTACTGGTCTGCTTCCTTCTGCTTTACA
GTCGTCCAGGCAGCTGCAGCGACATAAACGCCCACGATGGTCAGGGCCAAGTGGGATCGGAACAGCTCTG
GACATTCCAAGGACTTATTGCTTCAGTCTTCCAGTACTTACAACTTATATTCCACCAGATTGTACCCGAA
GGCATGTTCTGGGCAGATGACATAGCCTATGAGTTAATGACCAAAAAGGTGGAGCACCTCAGCAGACTCC
ACCCCCAGTATCCATGCAGGAAGGATATGAAGGCAGTTTCCCCCACGGCAAACGCTGGGGTGAGGAGCAA
GCAAGAGGAGAAACTTCAACTCTTATCTCCCCAAAAGAGTCCAACAGTCAAGGTGAACAGGGACCGATGC
TTTACCACCAAAGTAATCCCAAAGGCCACCAAACAAGAGGCCACCCATCCTACCAAGGGTTTCTTTGGGC
CATTCCCCACTGTGGGCCTCAACCTTGTTGCTGACTGA

Translation (175 aa):
MQSSLKPAGSGHLQLLVCFLLLYSRPGSCSDINAHDGQGQVGSEQLWTFQGLIASVFQYLQLIFHQIVPE
GMFWADDIAYELMTKKVEHLSRLHPQYPCRKDMKAVSPTANAGVRSKQEEKLQLLSPQKSPTVKVNRDRC
FTTKVIPKATKQEATHPTKGFFGPFPTVGLNLVAD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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