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Report for CCDS46335.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46335.1 Public Homo sapiens 2 NOTO 24 110 108 CCDS HistoryNCBI Gene:344022Re-query CCDS DB by CCDS ID:46335.1Re-query CCDS DB by GeneID:344022See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46335.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398468.4 ENSP00000381486.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000398468.4Link to Ensembl Protein Viewer:ENSP00000381486.3Re-query CCDS DB by Nucleotide ID:ENST00000398468Re-query CCDS DB by Protein ID:ENSP00000381486
Original member Current member NCBI NM_001134462.2 NP_001127934.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001134462.2Link to Protein Sequence:NP_001127934.1Re-query CCDS DB by Nucleotide ID:NM_001134462Re-query CCDS DB by Protein ID:NP_001127934Link to BLAST:NP_001127934.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001127934.1 251 A8MTQ0 251 100% 0 0

Chromosomal Locations for CCDS 46335.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 73202667 73203048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73208400 73208614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73210771 73210929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (756 nt):
ATGCCTAGCCCCAGGCCGCGAGGCAGCCCGCCACCCGCTCCCTCGGGCTCTCGGGTCCGACCTCCGCGCT
CTGGCCGCTCTCCGGCGCCCAGGTCCCCTACTGGCCCGAACACGCCCCGCGCTCCCGGACGCTTCGAGTC
CCCTTTCTCGGTCGAGGCCATCCTGGCGAGGCCCGACCCCTGCGCGCCGGCGGCCTCCCAGCCGTCGGGC
TCCGCCTGCGTCCACCCGGCCTTCTGGACCGCTGCTTCCCTGTGCGCCACCGGGGGTCTGCCCTGGGCTT
GCCCGACATCGTGGCTGCCCGCCTACCTGAGCGTAGGTTTTTACCCTGTGCCAGGGCCGCGCGTGGCTCC
CGTCTGCGGCCTGCTGGGCTTCGGCGTCACAGGGTTGGAGCTGGCTCACTGCTCAGGACTCTGGGCCTTC
CCAGACTGGGCCCCAACGGAGGACCTACAGGACACTGAGAGACAGCAAAAGAGAGTCCGAACTATGTTTA
ACTTGGAGCAGCTGGAAGAGTTGGAGAAAGTGTTTGCAAAACAGCACAATCTGGTGGGGAAGAAGAGAGC
CCAGCTGGCAGCTCGGCTCAAACTTACAGAGAACCAGGTGAGAGTCTGGTTCCAGAACCGCAGGGTCAAG
TATCAGAAGCAGCAAAAGCTGAGGGCAGCAGTTACATCTGCCGAGGCTGCCTCCCTGGATGAGCCTTCCA
GCAGCTCCATCGCCAGTATCCAGAGTGATGATGCCGAGTCAGGAGTGGACGGCTGA

Translation (251 aa):
MPSPRPRGSPPPAPSGSRVRPPRSGRSPAPRSPTGPNTPRAPGRFESPFSVEAILARPDPCAPAASQPSG
SACVHPAFWTAASLCATGGLPWACPTSWLPAYLSVGFYPVPGPRVAPVCGLLGFGVTGLELAHCSGLWAF
PDWAPTEDLQDTERQQKRVRTMFNLEQLEELEKVFAKQHNLVGKKRAQLAARLKLTENQVRVWFQNRRVK
YQKQQKLRAAVTSAEAASLDEPSSSSIASIQSDDAESGVDG


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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