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Report for CCDS55193.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55193.1 Public Homo sapiens 8 DEFB4B 24 110 108 CCDS HistoryNCBI Gene:100289462Re-query CCDS DB by CCDS ID:55193.1Re-query CCDS DB by GeneID:100289462See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55193.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000318157.3 ENSP00000424598.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000318157.3Link to Ensembl Protein Viewer:ENSP00000424598.1Re-query CCDS DB by Nucleotide ID:ENST00000318157Re-query CCDS DB by Protein ID:ENSP00000424598
Original member Current member NCBI NM_001205266.2 NP_001192195.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001205266.2Link to Protein Sequence:NP_001192195.1Re-query CCDS DB by Nucleotide ID:NM_001205266Re-query CCDS DB by Protein ID:NP_001192195Link to BLAST:NP_001192195.1

Chromosomal Locations for CCDS 55193.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 7414961 7415097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 7416770 7416827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (195 nt):
ATGAGGGTCTTGTATCTCCTCTTCTCGTTCCTCTTCATATTTCTGATGCCTCTTCCAGGTGTTTTTGGTG
GTATAGGCGATCCTGTTACCTGCCTTAAGAGTGGAGCCATATGTCATCCAGTCTTTTGCCCTAGAAGGTA
TAAACAAATTGGCACCTGTGGTCTCCCTGGAACAAAATGCTGCAAAAAGCCATGA

Translation (64 aa):
MRVLYLLFSFLFIFLMPLPGVFGGIGDPVTCLKSGAICHPVFCPRRYKQIGTCGLPGTKCCKKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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