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Report for CCDS30729.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30729.1 Public Homo sapiens 1 FYB2 24 110 108 CCDS HistoryNCBI Gene:199920Re-query CCDS DB by CCDS ID:30729.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30729.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343433.7 ENSP00000345972.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000343433.7Link to Ensembl Protein Viewer:ENSP00000345972.6Re-query CCDS DB by Nucleotide ID:ENST00000343433Re-query CCDS DB by Protein ID:ENSP00000345972
Original member Current member NCBI NM_001004303.5 NP_001004303.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004303.5Link to Protein Sequence:NP_001004303.3Re-query CCDS DB by Nucleotide ID:NM_001004303Re-query CCDS DB by Protein ID:NP_001004303Link to BLAST:NP_001004303.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004303.3 728 Q5VWT5-1 728 100% 0 0

Chromosomal Locations for CCDS 30729.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 56719671 56719692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56720022 56720055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56720173 56720329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56723588 56723681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56726497 56726583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56737087 56737147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56738625 56738653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56740697 56740795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56742161 56742221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56744026 56744066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56744152 56744266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56751044 56751203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56753839 56753935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56755896 56755927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56758716 56758750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56767829 56767938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56787175 56787208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56788973 56789134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56792056 56792803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 56819282 56819290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2187 nt):
ATGGAAGGGGAAGGGGTAAGAAACTTCAAGGAACTTCGAGCCAAATTTCAAAATCTTGATGCTCCACCTC
TTCCAGGACCTATTAAATTCCCAGCAGGTGTTTCTCCAAAGGGTGACATTGGAGGCACACAGTCAACTCA
AATTTTGGCCAATGGGAAACCCCTCTCATCCAACCACAAGCAGCGCACACCATACTGTTCCAGTAGTGAG
TCCCAGCCTCTTCAACCTCAGAAAATAAAGTTGGCTCAGAAGAGTGAAATTCCAAAATGTTCTAACTCCC
CAGGGCCTCTGGGAAAGTCTACTGTATGTTCTGCAACAAGTTCACAGAAGGCTTCTCTGCTGTTAGAGGT
GACTCAATCAAATGTTGAGATAATCACTAAGGAAAAAGTAATGGTGGCCAATAGCTTCAGAAACAAACTC
TGGAACTGGGAGAAGGTTTCATCTCAGAAAAGTGAAATGTCTTCAGCCCTTCTCCTTGCCAACTATGGAA
GTAAGGCCATCCATCTGGAAGGGCAAAAAGGCATGGGGCTTACTCCAGAGGAACCCAGGAAAAAGCTGGA
AACAAAAGGAGCCCAGACTCTTCCTTCCCAGAAGCACGTGGTGGCCCCCAAAATATTACATAACGTCTCT
GAAGATCCCTCTTTTGTAATTTCTCAACATATCAGAAAAAGCTGGGAAAACCCACCTCCTGAGAGGAGCC
CGGCAAGCAGCCCCTGCCAGCCCATCTATGAGTGTGAGCTTGCCAGTCAGGCCCCAGAAAAACAGCCAGA
TGTCAGGCATCACCACCTTCCCAAAACAAAGCCATTGCCCTCCATCGACTCCCTGGGTCCTCCTCCCCCA
AAGCCTTCAAGACCTCCCATCGTGAACCTCCAGGCCTTTCAGAGGCAGCCAGCTGCTGTTCCCAAGACTC
AGGGGGAAGTGACTGTGGAAGAGGGCTCCCTGTCTCCAGAGAGGCTTTTCAATGCAGAATTTGAAGAACC
ACATAATTACGAGGCAACAATTTCATATCTGAGACACTCTGGCAACTCCATTAACCTGTGCACTGCAAAA
GAAATTGCTGATCCAACTTATGAAGTTGGAATTGAAGAACTCCAAAAGCCTGGGAAGAATTTTCCCTATC
CAGAACCTAGTGCTAAACATGAAGATAAAAAAATGAAGGAAAAACAACCATGTGAATTGAAACCTAAAAA
CACAGAAAAGGAACCATATTCAAACCATGTTTTCAAGGTAGATGCCTGTGAAGGGACACCTGAAAAAATT
CAGATGACCAACGTCCACACAGGTAGAAGGAACATGTTGGCTGGAAAGCAAGAGGCCATGATTGACATCA
TCCAGACAAATCCCTGCCCTGAGGGCCCAAAGCTGGCCAGGCACTCCCAAGGCCACTGTGGGCATCTGGA
GGTTTTGGAGTCAACTAAAGAAACTCCAGACCTAGGGGTCTCTAAGACAAGTTCCATCTCGGAGGAGATA
TATGATGATGTCGAGTACTCCAGGAAAGAGGTACCGAAGCTGAACTACTCTAGCTCACTTGCCTCAAGTA
GTGAAGAAAATAGAGAACTGTATGAAGATGTCTACAAAACAAAGAACAACTACCCAAAGATAGATTTAGA
TGGAAAAGAAGCACTCAAAAGACTGCAGCAATTCTTCAAGAAAGAAAAGGATAGATTTAAAATAAAGAAA
ACCAAGTCGAAAGAAAACTTAAGTGCATTTTCCATTTTGCTGCCTGATTTAGAACTTAAGTCTCAGGAAG
TTATTATTTATGATGATGTAGACCTGAGTGAAAAAGAGTCAAAAGATGAAGATAAACTGAAAATGTGGAA
GCCCAAGTTTCTGACACCAAAGGAAAAAAAAGAGAAAAACGGTGCTGAAGAATCAGAAAGTTTCTCTCCT
AGAAATTTCTTCAAAACCAAGAAGCAAAACTTAGAAAAGAACAGAATGAAAAGAGAAGAAAAACTATTTA
GAGAAAGGTTTAAGTACGACAAAGAGATTATTGTCATCAATACAGCAGTGGCCTGTTCCAATAATTCAAG
AAATGGAATATTTGATTTGCCAATAAGTCCTGGAGAAGAATTGGAAGTCATTGATACCACCGAACAAAAT
CTAGTGATATGTCGTAATTCTAAAGGCAAATATGGATATGTGCTCATTGAACATCTAGATTTCAAGCATC
AAAGTTGGTCACCTTAG

Translation (728 aa):
MEGEGVRNFKELRAKFQNLDAPPLPGPIKFPAGVSPKGDIGGTQSTQILANGKPLSSNHKQRTPYCSSSE
SQPLQPQKIKLAQKSEIPKCSNSPGPLGKSTVCSATSSQKASLLLEVTQSNVEIITKEKVMVANSFRNKL
WNWEKVSSQKSEMSSALLLANYGSKAIHLEGQKGMGLTPEEPRKKLETKGAQTLPSQKHVVAPKILHNVS
EDPSFVISQHIRKSWENPPPERSPASSPCQPIYECELASQAPEKQPDVRHHHLPKTKPLPSIDSLGPPPP
KPSRPPIVNLQAFQRQPAAVPKTQGEVTVEEGSLSPERLFNAEFEEPHNYEATISYLRHSGNSINLCTAK
EIADPTYEVGIEELQKPGKNFPYPEPSAKHEDKKMKEKQPCELKPKNTEKEPYSNHVFKVDACEGTPEKI
QMTNVHTGRRNMLAGKQEAMIDIIQTNPCPEGPKLARHSQGHCGHLEVLESTKETPDLGVSKTSSISEEI
YDDVEYSRKEVPKLNYSSSLASSSEENRELYEDVYKTKNNYPKIDLDGKEALKRLQQFFKKEKDRFKIKK
TKSKENLSAFSILLPDLELKSQEVIIYDDVDLSEKESKDEDKLKMWKPKFLTPKEKKEKNGAEESESFSP
RNFFKTKKQNLEKNRMKREEKLFRERFKYDKEIIVINTAVACSNNSRNGIFDLPISPGEELEVIDTTEQN
LVICRNSKGKYGYVLIEHLDFKHQSWSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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