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Report for CCDS2052.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2052.1 Public Homo sapiens 2 CREG2 24 110 108 CCDS HistoryNCBI Gene:200407Re-query CCDS DB by CCDS ID:2052.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2052.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324768.6 ENSP00000315203.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000324768.6Link to Ensembl Protein Viewer:ENSP00000315203.4Re-query CCDS DB by Nucleotide ID:ENST00000324768Re-query CCDS DB by Protein ID:ENSP00000315203
Original member Current member NCBI NM_153836.4 NP_722578.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153836.4Link to Protein Sequence:NP_722578.1Re-query CCDS DB by Nucleotide ID:NM_153836Re-query CCDS DB by Protein ID:NP_722578Link to BLAST:NP_722578.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_722578.1 290 Q8IUH2 290 100% 0 0

Chromosomal Locations for CCDS 2052.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 101350923 101351070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101355253 101355366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101383533 101383702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 101387017 101387457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (873 nt):
ATGTCCGTGCGCCGCGGCCGGCGGCCGGCGCGGCCGGGGACCCGCCTCTCCTGGCTGCTGTGCTGCAGCG
CCCTGCTGTCCCCGGCCGCGGGCTACGTGATCGTGAGCTCCGTGTCTTGGGCCGTCACCAACGAGGTGGA
CGAGGAGCTGGACAGCGCCTCCACTGAGGAGGCTATGCCCGCGCTGCTAGAGGATTCGGGCAGCATCTGG
CAGCAAAGCTTCCCCGCCTCTGCCCACAAGGAGGACGCGCACCTGCGGCCCCGGGCGGGCGCCGCCCGGG
CCAGGCCGCCCCCCGCGCCACCCGGGATGTTCTCCTACCGGCGCGAGGGCGGCCAGACGGCCAGTGCGCC
CCCGGGCCCTAGACTGCGCGCCGCCACCGCCCGCTCCCTGGCCCATGCCAGCGTCTGGGGCTGCCTGGCC
ACCGTGTCCACCCACAAGAAGATCCAAGGACTGCCATTTGGGAACTGCCTGCCCGTCAGTGATGGCCCCT
TCAACAATAGCACTGGGATTCCTTTCTTCTACATGACAGCCAAGGACCCCGTGGTGGCTGATCTGATGAA
GAACCCCATGGCCTCGCTGATGCTGCCAGAATCAGAAGGGGAGTTCTGCAGAAAAAACATCGTTGATCCG
GAAGATCCCCGATGTGTCCAGTTAACGCTCACTGGCCAGATGATCGCAGTGTCTCCAGAAGAAGTAGAAT
TTGCCAAGCAAGCCATGTTTTCAAGGCACCCAGGGATGAGGAAGTGGCCTCGTCAATATGAATGGTTCTT
TATGAAGATGAGGATAGAACATATCTGGCTTCAGAAATGGTATGGAGGCGCATCCAGTATTTCAAGGGAG
GAATATTTCAAAGCAGTTCCCAGAAAGGCCTGA

Translation (290 aa):
MSVRRGRRPARPGTRLSWLLCCSALLSPAAGYVIVSSVSWAVTNEVDEELDSASTEEAMPALLEDSGSIW
QQSFPASAHKEDAHLRPRAGAARARPPPAPPGMFSYRREGGQTASAPPGPRLRAATARSLAHASVWGCLA
TVSTHKKIQGLPFGNCLPVSDGPFNNSTGIPFFYMTAKDPVVADLMKNPMASLMLPESEGEFCRKNIVDP
EDPRCVQLTLTGQMIAVSPEEVEFAKQAMFSRHPGMRKWPRQYEWFFMKMRIEHIWLQKWYGGASSISRE
EYFKAVPRKA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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