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Report for CCDS10580.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10580.1 Public Homo sapiens 16 IQCK 24 110 108 CCDS HistoryNCBI Gene:124152Re-query CCDS DB by CCDS ID:10580.1Re-query CCDS DB by GeneID:124152See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10580.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320394.10 ENSP00000324901.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000320394.10Link to Ensembl Protein Viewer:ENSP00000324901.6Re-query CCDS DB by Nucleotide ID:ENST00000320394Re-query CCDS DB by Protein ID:ENSP00000324901
Original member Current member EBI ENST00000695302.1 ENSP00000511791.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000695302.1Link to Ensembl Protein Viewer:ENSP00000511791.1Re-query CCDS DB by Nucleotide ID:ENST00000695302Re-query CCDS DB by Protein ID:ENSP00000511791
Original member Current member NCBI NM_001394804.1 NP_001381733.1 Accepted alive Link to Nucleotide Sequence:NM_001394804.1Link to Protein Sequence:NP_001381733.1Re-query CCDS DB by Nucleotide ID:NM_001394804Re-query CCDS DB by Protein ID:NP_001381733Link to BLAST:NP_001381733.1
Original member Current member NCBI NM_153208.3 NP_694940.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153208.3Link to Protein Sequence:NP_694940.1Re-query CCDS DB by Nucleotide ID:NM_153208Re-query CCDS DB by Protein ID:NP_694940Link to BLAST:NP_694940.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001381733.1 287 Q8N0W5-1 287 100% 0 0
NP_694940.1 287 Q8N0W5-1 287 100% 0 0

Chromosomal Locations for CCDS 10580.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 19718307 19718487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19730430 19730494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19733698 19733827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19735353 19735450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19763848 19763900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19764035 19764112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19788838 19788922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19827026 19827137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19856487 19856548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (864 nt):
ATGGCGGCACCGCGGCAAATCCCCAGCCACATAGTGCGCCTCAAGCCCAGCTGCTCTACAGACTCGTCGT
TCACCCGGACGCCGGTGCCCACCGTGTCTCTCGCGTCCCGCGAGCTGCCTGTCTCGTCGTGGCAGGTCAC
CGAGCCGTCAAGCAAGAATCTGTGGGAGCAGATCTGCAAGGAGTATGAAGCTGAGCAGCCTCCCTTTCCA
GAAGGATATAAAGTCAAACAGGAGCCTGTGATTACGGTTGCGCCAGTAGAGGAAATGCTTTTTCATGGCT
TCAGTGCAGAGCACTATTTTCCGGTTTCCCATTTCACCATGATCTCACGTACACCCTGTCCTCAAGATAA
ATCGGAAACAATCAACCCAAAAACATGTTCTCCCAAAGAATATTTGGAAACTTTCATCTTTCCTGTTCTG
CTTCCCGGAATGGCTAGCCTGCTTCACCAAGCGAAGAAAGAAAAATGTTTTGAGAGGAAAAGAACCAAAT
TCATTGCCTGTGATTTTCTGACTGAGTGGTTATACAACCAAAATCCAAAGAGGGCAGGGGAGCCATTCAC
AGAATTTTTCTCCATTCCATTTGTGGAGGAGCGGCTAAAGCAACACCCACGGCCGCCAATCCCACTCTCG
CTCCTGCTGACAGAAGAGGAAGCAGCCCTCTACATTCAATCCTTCTGGAGAGCCTGTGTGGTTCGCTGTG
ATCCTGAGATTCAAGAACTGCGTCAGTGGCAGAAGAAACTTCGCGAGGCCAAGCACATTCACCAGCAAGT
CAAAATTTTCTGGGCCAAGCAAGAACAAAAAGTGAAATGCAAAATGGAGGACGATGCAGTACCTGCAGCC
AAGATGAAAATTCCATCATCTTAA

Translation (287 aa):
MAAPRQIPSHIVRLKPSCSTDSSFTRTPVPTVSLASRELPVSSWQVTEPSSKNLWEQICKEYEAEQPPFP
EGYKVKQEPVITVAPVEEMLFHGFSAEHYFPVSHFTMISRTPCPQDKSETINPKTCSPKEYLETFIFPVL
LPGMASLLHQAKKEKCFERKRTKFIACDFLTEWLYNQNPKRAGEPFTEFFSIPFVEERLKQHPRPPIPLS
LLLTEEEAALYIQSFWRACVVRCDPEIQELRQWQKKLREAKHIHQQVKIFWAKQEQKVKCKMEDDAVPAA
KMKIPSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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