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Report for CCDS26767.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26767.1 Public Mus musculus 13 Plk2 23 108 98 CCDS HistoryNCBI Gene:20620Re-query CCDS DB by CCDS ID:26767.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26767.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022212.8 ENSMUSP00000022212.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022212.8Link to Ensembl Protein Viewer:ENSMUSP00000022212.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000022212Re-query CCDS DB by Protein ID:ENSMUSP00000022212
Original member Current member NCBI NM_152804.2 NP_690017.2 Accepted alive Link to Nucleotide Sequence:NM_152804.2Link to Protein Sequence:NP_690017.2Re-query CCDS DB by Nucleotide ID:NM_152804Re-query CCDS DB by Protein ID:NP_690017Link to BLAST:NP_690017.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_690017.2 682 P53351 682 100% 0 0

Chromosomal Locations for CCDS 26767.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 110395177 110395437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110396015 110396122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110396276 110396392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110396591 110396720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110396907 110396994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110397471 110397566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110397688 110397886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110397974 110398121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110398373 110398470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110398679 110398808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110399021 110399261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110399380 110399509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110399763 110399873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110400033 110400224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2049 nt):
ATGGAGCTCCTGCGGACTATCACCTACCAGCCGGCCGCCGGCACCAAGATGTGCGAGCAGGCTCTGGGCA
AAGCTTGCGGCGGGGACTCAAAGAAGAAGCGACCGCAGCAGCCTTCTGAAGATGGGCAGCCCCAAGCCCA
GGTGACCCCGGCGGCCCCGCACCACCATCACCACCATTCCCACTCGGGACCCGAGATCTCGCGGATTATA
GTCGACCCCACGACGGGGAAGCGCTACTGCCGGGGCAAAGTGCTGGGCAAGGGTGGATTTGCAAAGTGTT
ACGAAATGACAGATCTGACAAACAACAAAGTCTACGCTGCAAAAATTATTCCTCACAGCAGAGTAGCTAA
ACCTCATCAGAGGGAAAAGATCGACAAAGAAATCGAGCTTCACAGACTACTGCACCATAAGCATGTCGTG
CAGTTTTACCACTACTTTGAAGACAAAGAAAACATTTACATTCTCTTGGAATACTGCAGTAGAAGGTCCA
TGGCTCACATCTTGAAAGCAAGAAAGGTGTTGACAGAGCCAGAAGTCCGATACTACCTCAGGCAGATTGT
GTCAGGACTCAAGTATCTTCACGAACAAGAAATCTTGCACAGGGATCTCAAGCTAGGGAACTTTTTTATT
AATGAAGCCATGGAGCTGAAGGTGGGAGACTTTGGTTTGGCAGCCAGACTGGAACCACTGGAACACAGAA
GGAGAACAATATGTGGAACCCCAAATTATCTCTCCCCCGAAGTCCTCAACAAACAAGGACACGGCTGTGA
ATCAGACATCTGGGCCTTAGGCTGTGTAATGTATACGATGCTGCTAGGAAGACCTCCATTCGAAACCACA
AATCTGAAAGAAACGTACAGGTGCATAAGGGAAGCAAGGTATACCATGCCATCCTCATTGCTGGCCCCTG
CTAAGCACTTGATAGCTAGCATGCTGTCCAAAAACCCAGAGGACCGCCCCAGTTTGGATGACATCATTCG
GCATGACTTCTTCCTGCAGGGTTTCACTCCGGACAGACTCTCTTCCAGCTGTTGCCACACAGTTCCAGAT
TTCCACTTGTCAAGCCCAGCCAAGAATTTCTTTAAGAAAGCCGCAGCCGCTCTTTTTGGTGGCAAGAAGG
ACAAAGCAAGATATAACGACACACACAATAAGGTGTCTAAGGAAGATGAAGACATTTACAAGCTTCGGCA
TGATTTGAAGAAAGTGTCGATAACCCAGCAGCCTAGCAAACACAGAGCAGATGAGGAGCCCCAGCCGCCT
CCCACTACTGTTGCCAGATCTGGAACGTCCGCAGTGGAAAACAAACAGCAGATTGGGGATGCAATCCGGA
TGATAGTCAGGGGGACTCTCGGCAGCTGCAGCAGCAGCAGCGAATGCCTTGAAGACAGCACCATGGGAAG
TGTGGCAGACACAGTGGCAAGAGTCCTTCGAGGATGTCTAGAAAACATGCCGGAAGCTGACTGTATCCCC
AAAGAGCAGCTGAGCACGTCCTTTCAGTGGGTCACCAAGTGGGTCGACTACTCCAACAAATACGGCTTTG
GGTACCAGCTCTCGGACCACACTGTTGGCGTCCTTTTCAACAACGGGGCTCACATGAGCCTCCTTCCGGA
CAAAAAGACAGTTCACTATTATGCGGAACTTGGCCAATGCTCTGTTTTCCCAGCAACAGATGCCCCTGAA
CAATTTATTAGTCAAGTGACGGTGCTGAAATACTTTTCTCATTACATGGAGGAGAACCTCATGGATGGTG
GTGATCTCCCGAGTGTTACTGACATTCGAAGACCTCGGCTCTACCTCCTGCAGTGGTTAAAGTCTGATAA
AGCCTTAATGATGCTCTTCAATGACGGCACATTTCAGGTGAATTTCTACCACGATCATACAAAAATCATC
ATCTGTAACCAGAGTGAAGAATACCTTCTCACCTACATCAATGAGGACAGGATCTCTACAACTTTCAGAC
TGACGACTCTGCTGATGTCTGGCTGTTCGTTAGAATTGAAAAATCGAATGGAATATGCCCTGAACATGCT
CTTACAGAGATGTAACTGA

Translation (682 aa):
MELLRTITYQPAAGTKMCEQALGKACGGDSKKKRPQQPSEDGQPQAQVTPAAPHHHHHHSHSGPEISRII
VDPTTGKRYCRGKVLGKGGFAKCYEMTDLTNNKVYAAKIIPHSRVAKPHQREKIDKEIELHRLLHHKHVV
QFYHYFEDKENIYILLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFI
NEAMELKVGDFGLAARLEPLEHRRRTICGTPNYLSPEVLNKQGHGCESDIWALGCVMYTMLLGRPPFETT
NLKETYRCIREARYTMPSSLLAPAKHLIASMLSKNPEDRPSLDDIIRHDFFLQGFTPDRLSSSCCHTVPD
FHLSSPAKNFFKKAAAALFGGKKDKARYNDTHNKVSKEDEDIYKLRHDLKKVSITQQPSKHRADEEPQPP
PTTVARSGTSAVENKQQIGDAIRMIVRGTLGSCSSSSECLEDSTMGSVADTVARVLRGCLENMPEADCIP
KEQLSTSFQWVTKWVDYSNKYGFGYQLSDHTVGVLFNNGAHMSLLPDKKTVHYYAELGQCSVFPATDAPE
QFISQVTVLKYFSHYMEENLMDGGDLPSVTDIRRPRLYLLQWLKSDKALMMLFNDGTFQVNFYHDHTKII
ICNQSEEYLLTYINEDRISTTFRLTTLLMSGCSLELKNRMEYALNMLLQRCN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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