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Report for CCDS37704.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37704.1 Public Mus musculus 17 Sos1 23 108 98 CCDS HistoryNCBI Gene:20662Re-query CCDS DB by CCDS ID:37704.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37704.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000068714.6 ENSMUSP00000067786.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000068714.6Link to Ensembl Protein Viewer:ENSMUSP00000067786.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000068714Re-query CCDS DB by Protein ID:ENSMUSP00000067786
Original member Current member NCBI NM_009231.2 NP_033257.2 Accepted alive Link to Nucleotide Sequence:NM_009231.2Link to Protein Sequence:NP_033257.2Re-query CCDS DB by Nucleotide ID:NM_009231Re-query CCDS DB by Protein ID:NP_033257Link to BLAST:NP_033257.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033257.2 1319 Q62245 1319 100% 0 0

Chromosomal Locations for CCDS 37704.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 80398181 80398672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80399741 80399859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80406691 80406958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80408246 80408362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80408568 80408740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80413599 80413716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80414943 80415105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80419009 80419128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80420263 80420485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80422682 80422785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80423116 80423238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80424130 80424211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80433497 80434152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80434895 80435022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80445430 80445528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80445602 80445712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80449258 80449401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80451981 80452190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80453756 80453920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80455052 80455183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80459922 80460047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80479837 80479923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3960 nt):
ATGCAGGCGCAGCAGCTGCCTTACGAGTTTTTCAGCGAGGAGAACGCGCCCAAGTGGCGGGGGCTGCTGG
TGCCTGCGCTGAAAAAGGTTCAGGGGCAAGTTCACCCTACTCTTGAGTCTAATGATGATGCTCTTCAGTA
TGTTGAAGAATTAATTTTGCAATTACTAAATATGCTATGCCAAGCTCAGCCCCGGAGTGCTTCAGATGTG
GAGGAACGTGTTCAAAAGAGTTTTCCTCATCCAATTGATAAGTGGGCAATAGCTGATGCCCAATCAGCCA
TTGAAAAGAGGAAGAGACGAAATCCTTTATCGCTGCCAGCAGAAAGAATTCATCATTTATTAAGGGAGGT
CCTCGGTTATAAAATTGACCACCAGGTTTCTGTTTACATAGTAGCAGTATTAGAATACATTTCTGCAGAT
ATTTTAAAGCTCGTGGGGAATTATGTAAGAAATATACGGCATTATGAAATTACAAAACAAGACATTAAAG
TGGCAATGTGTGCTGATAAGGTATTGATGGATATGTTTCATCAAGATGTAGAAGATATAAATATCTTATC
TTTAACTGATGAAGAGCCTTCCACCTCAGGAGAACAAACTTATTATGATTTGGTAAAAGCATTCATGGCA
GAAATTCGACAGTATATAAGAGAATTAAATCTAATTATAAAAGTTTTTCGAGAGCCCTTTGTCTCTAATT
CCAAATTGTTTTCATCTAATGATGTAGAAAACATATTCAGTCGTATAGTAGATATACATGAACTTAGTGT
AAAGTTACTGGGCCATATAGAAGATACTGTAGAAATGACAGATGAAGGCAGTCCCCACCCATTAGTAGGA
AGCTGTTTTGAAGACTTAGCAGAAGAACTGGCATTTGACCCGTATGAGTCATATGCTCGGGATATTTTAC
GACCCGGATTCCATGGCCATTTTCTTAGTCAGTTATCAAAGCCTGGGGCAGCACTTTATTTGCAGTCCAT
AGGCGAAGGCTTCAAAGAAGCTGTCCAGTACGTCCTGCCCCGGCTGCTGCTTGCCCCTGTGTACCACTGT
CTGCATTACTTTGAACTTCTGAAGCAGTTAGAAGAAAAGAGTGAAGATCAAGAAGACAAGGAGTGTATGA
AGCAAGCAATAACAGCCCTGCTTAATGTCCAAAGTGGCATGGAAAAAATTTGCTCCAAAAGTCTTGCAAA
ACGAAGACTAAGTGAGTCTGCATGTCGGTTTTACAGCCAGCAGATGAAGGGGAAACAGCTAGCCATCAAG
AAGATGAACGAGATCCAGAAGAACATTGATGGCTGGGAGGGGAAGGACATTGGACAGTGTTGCAATGAGT
TCATAATGGAAGGAACTCTTACACGTGTAGGAGCCAAACACGAGAGACACATATTTCTCTTCGATGGCTT
AATGATTTGCTGTAAATCAAACCATGGGCAGCCAAGACTCCCTGGTGCTAGCAGTGCAGAATACCGGCTT
AAAGAAAAGTTTTTTATGCGAAAGGTACAGATTAATGATAAAGATGACACCAGTGAGTACAAGCATGCTT
TTGAAATCATTCTGAAAGATGGCAATAGTGTTATATTTTCTGCCAAGTCAGCTGAAGAGAAAAACAACTG
GATGGCAGCACTGATCTCTTTGCAGTACCGCAGCACCCTGGAGAGGATGCTGGACGTAACGGTGCTGCAG
GAGGAGAAGGAGGAGCAGATGAGGCTGCCCAGTGCTGAAGTGTACAGGTTTGCAGAACCTGACTCCGAGG
AGAATATTCTATTCGAAGAGAATGTGCAGCCCAAAGCTGGGATCCCCATTATCAAGGCAGGGACAGTGCT
TAAGCTCATTGAGAGGCTTACCTACCACATGTACGCAGATCCAAATTTTGTTCGGACGTTTCTTACAACA
TACAGGTCCTTTTGCAGACCTCAAGAACTACTGAGTCTTCTGATAGAAAGATTTGAAATTCCAGAGCCTG
AGCCAACAGAAGCTGATCGCATAGCTATAGAGAATGGAGATCAGCCCCTGAGTGCAGAGCTGAAGAGGTT
TAGAAAGGAATATATTCAGCCTGTGCAGTTGAGGGTGTTAAATGTGTGTCGGCACTGGGTGGAGCACCAT
TTCTATGACTTTGAAAGAGATGCAGACCTTTTACAGAGAATGGAGGAATTTATTGGAACAGTAAGAGGTA
AAGCAATGAAAAAATGGGTCGAATCCATCACTAAGATAATCCAAAGGAAAAAAATTGCAAGAGACAATGG
CCCAGGTCATAACATTACATTTCAGAGCTCACCTCCCACAGTTGAGTGGCACATAAGCAGACCTGGGCAC
ATAGAGACTTTTGACTTGCTCACCTTACACCCAATAGAAATTGCTCGGCAACTCACTTTACTTGAATCAG
ATCTATACCGGGCTGTGCAGCCATCAGAATTAGTTGGAAGTGTGTGGACAAAAGAAGATAAAGAAATTAA
TTCTCCCAACCTTCTGAAGATGATTCGGCACACCACTAACCTCACTTTGTGGTTTGAGAAATGTATTGTA
GAAACAGAAAACTTAGAAGAAAGAGTAGCTGTAGTAAGTCGGATAATTGAGATTCTACAAGTCTTTCAAG
AGCTGAACAACTTCAATGGTGTCCTGGAAGTTGTCAGTGCTATGAACTCGTCACCTGTTTACAGACTAGA
CCACACATTTGAGCAAATACCAAGCAGACAAAAGAAAATTTTAGAAGAAGCTCATGAATTGAGTGAAGAT
CACTATAAGAAATATTTGGCAAAACTCAGGTCTATTAATCCACCGTGTGTGCCTTTCTTTGGAATTTATC
TCACAAATATCCTGAAGACAGAAGAGGGCAACCCTGAGGTCCTGAGGAGACACGGGAAAGAGCTTATTAA
CTTCAGCAAGAGGAGGAGAGTGGCCGAGATCACAGGCGAGATCCAGCAGTACCAGAACCAGCCCTACTGC
TTACGGGTGGAGCCGGACATCAAGAGGTTCTTTGAAAACTTGAATCCAATGGGAAACAGCATGGAGAAAG
AATTTACAGACTATCTGTTCAACAAATCCCTAGAAATAGAACCCCGGCACCCTAAGCCTCTTCCGAGATT
CCCAAAAAAATACAGCTATCCCCTAAAATCTCCTGGTGTTCGTCCATCAAATCCAAGACCAGGAACCATG
AGACATCCCACACCTCTGCAGCAGGAGCCAAGAAAAATTAGCTACAGTCGGATTCCTGAAAGTGAGACGG
AAAGCACAGCATCTGCACCAAACTCCCCTCGGACCCCACTGACGCCGCCCCCTGCATCTGGCACCTCCAG
CAACACAGATGTTTGCAGCGTGTTCGATTCTGACCACTCGGCAAGCCCTTTTCATTCAAGATCTGCTTCA
GTCTCATCTATAAGTTTATCCAAGGGCACTGATGAAGTGCCTGTCCCCCCTCCTGTACCCCCTCGAAGAC
GTCCAGAGTCTGCCCCAGCTGAATCCTCCCCATCCAAGATTATGTCTAAGCACTTGGACAGCCCCCCAGC
TATTCCTCCTAGGCAACCCACATCCAAAGCCTATTCACCACGCTATTCAATATCAGATCGGACCTCTATA
TCAGATCCTCCTGAAAGCCCTCCCTTGTTACCACCACGGGAACCTGTGAGGACACCTGATGTTTTCTCAA
GCTCACCATTACATCTCCAACCTCCTCCTTTGGGCAAAAAGAGTGATCATGGCAACGCCTTCTTCCCAAA
CAGCCCATCCCCTTTTACACCGCCACCCCCCCAAACCCCCTCTCCTCATGGCACGAGAAGGCATCTGCCA
TCACCACCACTGACACAGGAGATGGACCTCCATTCCATTGCTGGGCCTCCTGTTCCTCCACGACAAAGCA
CTTCTCAACTTATCCCCAAACTCCCTCCAAAAACTTACAAAAGGGAGCACACACACCCATCCATGCATAG
AGATGGACCACCACTGCTGGAGAATGCCCATTCTTCCTGA

Translation (1319 aa):
MQAQQLPYEFFSEENAPKWRGLLVPALKKVQGQVHPTLESNDDALQYVEELILQLLNMLCQAQPRSASDV
EERVQKSFPHPIDKWAIADAQSAIEKRKRRNPLSLPAERIHHLLREVLGYKIDHQVSVYIVAVLEYISAD
ILKLVGNYVRNIRHYEITKQDIKVAMCADKVLMDMFHQDVEDINILSLTDEEPSTSGEQTYYDLVKAFMA
EIRQYIRELNLIIKVFREPFVSNSKLFSSNDVENIFSRIVDIHELSVKLLGHIEDTVEMTDEGSPHPLVG
SCFEDLAEELAFDPYESYARDILRPGFHGHFLSQLSKPGAALYLQSIGEGFKEAVQYVLPRLLLAPVYHC
LHYFELLKQLEEKSEDQEDKECMKQAITALLNVQSGMEKICSKSLAKRRLSESACRFYSQQMKGKQLAIK
KMNEIQKNIDGWEGKDIGQCCNEFIMEGTLTRVGAKHERHIFLFDGLMICCKSNHGQPRLPGASSAEYRL
KEKFFMRKVQINDKDDTSEYKHAFEIILKDGNSVIFSAKSAEEKNNWMAALISLQYRSTLERMLDVTVLQ
EEKEEQMRLPSAEVYRFAEPDSEENILFEENVQPKAGIPIIKAGTVLKLIERLTYHMYADPNFVRTFLTT
YRSFCRPQELLSLLIERFEIPEPEPTEADRIAIENGDQPLSAELKRFRKEYIQPVQLRVLNVCRHWVEHH
FYDFERDADLLQRMEEFIGTVRGKAMKKWVESITKIIQRKKIARDNGPGHNITFQSSPPTVEWHISRPGH
IETFDLLTLHPIEIARQLTLLESDLYRAVQPSELVGSVWTKEDKEINSPNLLKMIRHTTNLTLWFEKCIV
ETENLEERVAVVSRIIEILQVFQELNNFNGVLEVVSAMNSSPVYRLDHTFEQIPSRQKKILEEAHELSED
HYKKYLAKLRSINPPCVPFFGIYLTNILKTEEGNPEVLRRHGKELINFSKRRRVAEITGEIQQYQNQPYC
LRVEPDIKRFFENLNPMGNSMEKEFTDYLFNKSLEIEPRHPKPLPRFPKKYSYPLKSPGVRPSNPRPGTM
RHPTPLQQEPRKISYSRIPESETESTASAPNSPRTPLTPPPASGTSSNTDVCSVFDSDHSASPFHSRSAS
VSSISLSKGTDEVPVPPPVPPRRRPESAPAESSPSKIMSKHLDSPPAIPPRQPTSKAYSPRYSISDRTSI
SDPPESPPLLPPREPVRTPDVFSSSPLHLQPPPLGKKSDHGNAFFPNSPSPFTPPPPQTPSPHGTRRHLP
SPPLTQEMDLHSIAGPPVPPRQSTSQLIPKLPPKTYKREHTHPSMHRDGPPLLENAHSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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