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Report for CCDS26432.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26432.1 Public Mus musculus 13 Serpinb9b 23 108 98 CCDS HistoryNCBI Gene:20706Re-query CCDS DB by CCDS ID:26432.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26432.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000006392.2 ENSMUSP00000006392.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000006392.2Link to Ensembl Protein Viewer:ENSMUSP00000006392.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000006392Re-query CCDS DB by Protein ID:ENSMUSP00000006392
Original member Current member NCBI NM_011452.3 NP_035582.1 Accepted alive Link to Nucleotide Sequence:NM_011452.3Link to Protein Sequence:NP_035582.1Re-query CCDS DB by Nucleotide ID:NM_011452Re-query CCDS DB by Protein ID:NP_035582Link to BLAST:NP_035582.1

Chromosomal Locations for CCDS 26432.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 33029462 33029629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33032916 33033053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33033527 33033644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33035516 33035658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33037972 33038127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33039550 33039960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1134 nt):
ATGAGTACTCTGTCTGAAGCAAATGGCACCTTTGCCATCCATCTATTGAAGATGTTATGTCAAAGCAACC
CTTCCAAAAATGTATGTTTTTCTCCTGTGAGCATCTCCTCTGCTCTAGCTATGGTCCTCCTGGGTGCAAA
GGAGCAGACCGCAGTCCAGATATCTCAGGCACTTGGTTTGAAGAAAGAGAAAGGCATCCATCAGGGATTC
CTGAAGCTTCTCAGGAAGCTGAACAAGCCAGACAGAAAATACTCCCTTATAGTGGCCAACAGGCTCTTTG
CAGACAAAACTTGTGAAGTCCTCCAAACCTTTAAGGAGTCCTGTTTTCGCTTCTATGATTCAGAGATGGA
GCAGGTCAACTTTTTCAAAGCTGCAGTGGAGTCCAGGCAATGCATAAACACGTGGGTCTCCAAACAGACT
GAAGGCAAAATCCCAGAGTTGTTGGCAGATGACTCAGTTAATTTCCAGACCAGGCTGGTTCTCGTCAATG
CCTTATATTTCAAAGGGATGTGGGCTTGCCAGTTTTGCAAAGAATCCACCAGGGAAATGCCATTTTACAT
AAACAAGGATGAGAAAAGGCCAGTGCAGATGATGTGTCAGACAGACACATTTATGTTTGCCTTTGTGGAT
GAGTTGCCAGCTAGATTGCTGATAATGCCCTATGAAGGCATGGAGCTGAGCTTGATGGTCCTGCTCCCAG
AGAAGGGTGTGGACCTCAGCAAGGTGGAAAATGATCTCACTTTTGAAAAGTTAATAGCCTGGACCAAACC
AGACATTATGTGGTCCACTGAGGTTAAGGTTTTCCTTCCAAAATTTAAACTGCAAGAGGATTATGAGATG
AAATCTGTGCTTCAGTGCTTGGGAATTGTGGATGTCTTCGAAAAAGAAAAGGCTGACTTATCAGCAATGT
CTCCAGAGAGAAACCTATGTCTGTCCAAGTTTATTCACAAGAGTGTAGTGGAGGTCAATGAGGAAGGCAC
AGAGGCTGCAGCAGCATCCTCCGCTGAGGGCATCATTCCTCTCTGCTTAGGTGGTGGCCCATCATGGTTC
TGTGCGGACCACCCCTTCCTTTTCTTCATCAGGCACAACCAAACCAACAGCATCCTGTTCTGTGGCAGGT
TCTCATCTCCATAA

Translation (377 aa):
MSTLSEANGTFAIHLLKMLCQSNPSKNVCFSPVSISSALAMVLLGAKEQTAVQISQALGLKKEKGIHQGF
LKLLRKLNKPDRKYSLIVANRLFADKTCEVLQTFKESCFRFYDSEMEQVNFFKAAVESRQCINTWVSKQT
EGKIPELLADDSVNFQTRLVLVNALYFKGMWACQFCKESTREMPFYINKDEKRPVQMMCQTDTFMFAFVD
ELPARLLIMPYEGMELSLMVLLPEKGVDLSKVENDLTFEKLIAWTKPDIMWSTEVKVFLPKFKLQEDYEM
KSVLQCLGIVDVFEKEKADLSAMSPERNLCLSKFIHKSVVEVNEEGTEAAAASSAEGIIPLCLGGGPSWF
CADHPFLFFIRHNQTNSILFCGRFSSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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