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Report for CCDS24667.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24667.1 Public Mus musculus 11 Or2y8 23 108 98 CCDS HistoryNCBI Gene:211472Re-query CCDS DB by CCDS ID:24667.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24667.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000078264.1 ENSMUSP00000077384.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000078264.1Link to Ensembl Protein Viewer:ENSMUSP00000077384.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000078264Re-query CCDS DB by Protein ID:ENSMUSP00000077384
Original member Current member NCBI NM_207227.1 NP_997110.1 Accepted alive Link to Nucleotide Sequence:NM_207227.1Link to Protein Sequence:NP_997110.1Re-query CCDS DB by Nucleotide ID:NM_207227Re-query CCDS DB by Protein ID:NP_997110Link to BLAST:NP_997110.1

Chromosomal Locations for CCDS 24667.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 52144593 52145528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGGACTATTTGAACACCAGTTCAGAGGAGGGCTTCATTTTGGTGGGCTTCTCAGACTGGCCTCACCTAG
AACCAACCCTTTTTGCTTTCATTTCTATTTTCTACTCTCTGACTCTCTTTGGCAACACCGTGATCATCAT
TCTGTCTCGACTGGACCTCCGCCTGCACACACTCATGTACTACTTCCTCTGCCACCTCTCCTTCCTGGAC
CTCTGCTACACCGCCAGCACTGTGCCCCAGCTTCTGGTCAACCTCTCTGGACTTGACAGGACCATCAGCT
TTGGAAGGTGTGTGGCCCAGCTCTGCATAGTGCTCTCACTGGGGGGAACTGAGTGTGTGCTTTTGGTGAC
AATGGCTATAGATCGCTATGCTGCTGTGTGTCGCCCACTCCACTACACAACCATTATGCACCCTGTTCTC
TGCAGAGCATTGGTTGTATTCTCCTGGGTGGGGGGCCTTGTGAACTCTCTGATCCAGACAAGCCTTGTGA
TGGCCATGCCTCTGTGTGGACACCAACTGAATCACTTCTTCTGTGAGCTACCTGTTCTCCTGAAGATGGC
CTGTGAGGACACAGGAGGCACAGAGGTCAATTTGTTTGTGGCCCGGGTCATAATCTTAGTGTGTCCTTTA
CTGCTAATTCTAGGCTCCTATGCTCACATTGCCAGGGCAGTGCTGAACATCAGGTCAGTGGCTGGTCGCA
GAAAGGCTTTTGGGACATGTGCATCTCATCTCATTGTGGTTGCCATGTTCTATGGCTCAGCCATCTCCAC
ATACCTCCAACCTGTCCACAGGTATTCTGAGAAGGAGGGAAAATTTCTTGCCCTTTTTTATACTGTAATC
ACCCCCATGCTCAACCCTCTGATCTATACGCTGAGGAACAAGGATGTGAAAGGAGCGCTGTGGAAGGTGC
TAGGGAGAGGCACAGACTCCAGGTAG

Translation (311 aa):
MDYLNTSSEEGFILVGFSDWPHLEPTLFAFISIFYSLTLFGNTVIIILSRLDLRLHTLMYYFLCHLSFLD
LCYTASTVPQLLVNLSGLDRTISFGRCVAQLCIVLSLGGTECVLLVTMAIDRYAAVCRPLHYTTIMHPVL
CRALVVFSWVGGLVNSLIQTSLVMAMPLCGHQLNHFFCELPVLLKMACEDTGGTEVNLFVARVIILVCPL
LLILGSYAHIARAVLNIRSVAGRRKAFGTCASHLIVVAMFYGSAISTYLQPVHRYSEKEGKFLALFYTVI
TPMLNPLIYTLRNKDVKGALWKVLGRGTDSR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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