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Report for CCDS13495.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13495.1 Public Homo sapiens 20 OSBPL2 24 110 108 CCDS HistoryNCBI Gene:9885Re-query CCDS DB by CCDS ID:13495.1Re-query CCDS DB by GeneID:9885See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13495.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313733.9 ENSP00000316649.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000313733.9Link to Ensembl Protein Viewer:ENSP00000316649.3Re-query CCDS DB by Nucleotide ID:ENST00000313733Re-query CCDS DB by Protein ID:ENSP00000316649
Original member Current member EBI ENST00000643412.1 ENSP00000494549.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000643412.1Link to Ensembl Protein Viewer:ENSP00000494549.1Re-query CCDS DB by Nucleotide ID:ENST00000643412Re-query CCDS DB by Protein ID:ENSP00000494549
Original member Current member EBI ENST00000643981.1 ENSP00000495379.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000643981.1Link to Ensembl Protein Viewer:ENSP00000495379.1Re-query CCDS DB by Nucleotide ID:ENST00000643981Re-query CCDS DB by Protein ID:ENSP00000495379
Original member Current member NCBI NM_144498.4 NP_653081.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144498.4Link to Protein Sequence:NP_653081.1Re-query CCDS DB by Nucleotide ID:NM_144498Re-query CCDS DB by Protein ID:NP_653081Link to BLAST:NP_653081.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653081.1 480 Q9H1P3-1 480 100% 0 0

Chromosomal Locations for CCDS 13495.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 62256185 62256221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62259981 62260125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62263616 62263691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62272125 62272259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62273309 62273406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62279157 62279339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62281058 62281165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62281790 62281879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62284046 62284169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62286583 62286711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62289207 62289330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62291703 62291793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62293785 62293887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1443 nt):
ATGAACGGAGAGGAAGAATTCTTTGATGCCGTCACAGGCTTTGATTCTGATAACTCTTCTGGGGAATTTT
CAGAGGCAAATCAGAAAGTCACGGGAATGATTGACTTAGACACCAGCAAAAATAATAGGATTGGGAAAAC
TGGGGAGAGGCCCTCTCAAGAGAACGGAATTCAGAAACACAGGACATCGCTGCCGGCTCCCATGTTCAGC
AGAAGCGACTTCAGCGTGTGGACCATCCTGAAGAAGTGTGTTGGCCTGGAGCTGTCCAAGATCACGATGC
CAATCGCCTTCAACGAGCCTCTGAGCTTCTTGCAGCGGATCACGGAGTACATGGAGCACGTGTACCTCAT
CCACAGGGCCTCCTGCCAGCCCCAGCCCCTGGAGAGGATGCAGTCTGTGGCTGCTTTTGCTGTTTCGGCT
GTGGCTTCCCAGTGGGAGAGGACCGGCAAACCATTTAATCCACTCTTGGGAGAAACGTATGAATTAATCA
GGGAAGATTTAGGATTCAGATTTATATCGGAACAGGTCAGTCACCACCCCCCCATCAGTGCGTTCCACTC
GGAAGGTCTCAACCATGACTTCCTGTTCCATGGCTCCATCTACCCCAAGCTCAAGTTCTGGGGCAAAAGC
GTGGAGGCGGAGCCCCGAGGCACCATCACCCTGGAGCTGCTCAAACATAATGAAGCCTACACCTGGACCA
ACCCCACCTGCTGCGTCCACAACGTCATCATCGGGAAGCTGTGGATAGAGCAGTATGGGACAGTGGAGAT
TTTAAACCACAGAACTGGACATAAGTGTGTGCTTCACTTTAAACCGTGTGGATTATTTGGAAAAGAACTT
CACAAGGTGGAAGGACACATTCAAGACAAAAACAAAAAGAAGCTCTTTATGATCTATGGCAAATGGACGG
AATGTTTGTGGGGCATAGATCCTGTTTCGTATGAATCCTTCAAGAAGCAGGAGAGGAGAGGTGACCACCT
GAGAAAGGCCAAGCTGGATGAAGACTCCGGGAAGGCTGACAGCGACGTGGCTGACGACGTGCCTGTGGCC
CAGGAGACCGTGCAGGTCATTCCTGGCAGCAAGCTGCTCTGGAGGATCAACACCCGGCCCCCCAACTCTG
CCCAGATGTATAATTTCACCAGTTTCACTGTGAGCCTCAACGAGCTGGAGACAGGCATGGAGAAGACCCT
GCCACCCACGGACTGCCGCCTGCGCCCTGACATCCGCGGCATGGAGAATGGCAACATGGATCTGGCCAGC
CAGGAGAAGGAGCGGCTGGAGGAGAAGCAGAGAGAAGCACGGAGGGAGCGGGCCAAGGAGGAGGCAGAGT
GGCAGACGAGGTGGTTCTACCCAGGCAATAACCCCTACACTGGGACCCCCGACTGGTTGTATGCAGGGGA
TTACTTTGAGCGGAATTTCTCCGACTGCCCAGATATCTACTGA

Translation (480 aa):
MNGEEEFFDAVTGFDSDNSSGEFSEANQKVTGMIDLDTSKNNRIGKTGERPSQENGIQKHRTSLPAPMFS
RSDFSVWTILKKCVGLELSKITMPIAFNEPLSFLQRITEYMEHVYLIHRASCQPQPLERMQSVAAFAVSA
VASQWERTGKPFNPLLGETYELIREDLGFRFISEQVSHHPPISAFHSEGLNHDFLFHGSIYPKLKFWGKS
VEAEPRGTITLELLKHNEAYTWTNPTCCVHNVIIGKLWIEQYGTVEILNHRTGHKCVLHFKPCGLFGKEL
HKVEGHIQDKNKKKLFMIYGKWTECLWGIDPVSYESFKKQERRGDHLRKAKLDEDSGKADSDVADDVPVA
QETVQVIPGSKLLWRINTRPPNSAQMYNFTSFTVSLNELETGMEKTLPPTDCRLRPDIRGMENGNMDLAS
QEKERLEEKQREARRERAKEEAEWQTRWFYPGNNPYTGTPDWLYAGDYFERNFSDCPDIY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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