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Report for CCDS1812.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1812.1 Public Homo sapiens 2 PLEKHH2 24 110 108 CCDS HistoryNCBI Gene:130271Re-query CCDS DB by CCDS ID:1812.1Re-query CCDS DB by GeneID:130271See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1812.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000282406.9 ENSP00000282406.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000282406.9Link to Ensembl Protein Viewer:ENSP00000282406.4Re-query CCDS DB by Nucleotide ID:ENST00000282406Re-query CCDS DB by Protein ID:ENSP00000282406
Original member Current member NCBI NM_172069.4 NP_742066.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_172069.4Link to Protein Sequence:NP_742066.2Re-query CCDS DB by Nucleotide ID:NM_172069Re-query CCDS DB by Protein ID:NP_742066Link to BLAST:NP_742066.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_742066.2 1493 Q8IVE3-1 1493 100% 0 0

Chromosomal Locations for CCDS 1812.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 43644674 43644796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43678863 43678925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43692514 43692663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43694431 43694514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43695143 43695224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43697171 43697356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43699647 43700608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43703981 43704056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43706322 43706416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43707401 43707545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43709990 43710126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43710220 43710330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43710489 43710575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43712225 43712383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43720669 43720749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43726272 43726451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43729637 43729745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43731490 43731602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43738341 43738520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43740946 43741043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43742741 43742918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43743834 43743989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43745866 43745963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43753619 43753760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43757119 43757264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43758900 43759029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43762304 43762390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43764228 43764365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43765413 43765598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4482 nt):
ATGGCAGAGCTTTCTGAGCCAGAGGGACCAGTAGATTGGAAGGAACGATGTGTAGCTCTGGAGTCCCAAC
TC
ATGAAATTTAGAGTTCAAGCAAGCAAGATACGAGAGCTTTTAGCAGAGAAGATGCAACAGCTTGAGAG
A
CAAGTTATTGATGCTGAACGTCAAGCAGAAAAAGCTTTTCAACAGGTACAAGTTATGGAAGATAAATTA
AAA
GCAGCTAATATTCAAACCAGTGAATCAGAGACAAGATTATATAATAAGTGTCAAGATCTGGAGTCGC
TA
ATACAGGAAAAAGATGACGTCATTCAAAACTTGGAATTGCAACTTGAAGAGCAGAAACAAATAAGAAT
A
CAAGAAGCTAAAATAATAGAAGAGAAAGCAGCTAAGATAAAAGAATGGGTAACAGTTAAGTTAAATGAG
CTG
GAATTGGAGAATCAGAATCTTCGTTTGATCAACCAAAACCAAACTGAAGAGATAAGAACAATGCAGT
CA
AAACTACAAGAAGTTCAAGGAAAGAAGTCATCCACTGTCTCTACACTAAAGCTTTCGGAAGGCCAGCG
C
CTGAGCAGTTTGACCTTTGGGTGCTTTTTATCTCGAGCAAGGAGTCCTCCTCAAGTAGTAAAATCTGAG
GAA
ATGAGCAAGATATCATCGAAAGAACCTGAGTTCACTGAAGGAAAAGACATGGAAGAAATGGAAATTC
CA
GAAAAGTCTGTTGATAACCAAGTTCTAGAAAACAACAGAGGCCAGAGAACATTGCATCAAACCCCTTG
T
GGCTCAGAACAGAATCGGAAAACAAGAACAAGCTTTGCCACAGATGGTGGCATCTCCCAGAATTCTGGG
GCT
CCTGTGAGTGACTGGAGCTCTGATGAGGAAGACGGGAGCAAAGGAAGATCCAAGTCCAGATGCACAT
CC
ACCCTCTCCAGTCACACATCTGAGGAAGGGGTCCAGTGTAGCAGGATGGGAAGTGAAATGTATCTGAC
A
GCATCTGATGACAGCAGCTCTATATTTGAGGAAGAGACTTTTGGCATAAAGAGACCAGAACACAAGAAG
CTA
TATTCTTGGCAGCAGGAGGCACAGTGGAAAGCTCTAAATAGTCCTCTTGGAAAGGGAAATTCTGAAT
TA
AGTAAAAAGGAACAAGATAGTTCCTCGGATGAACTGAATAAAAAATTTCAATCCCAGAGACTCGATTA
T
TCATCTTCATCGAGTGAAGCCAACACCCCAAGCCCTATTTTGACCCCAGCTTTAATGCCAAAGCATCCT
AAC
TCACTCTCTGGAAAAGGAACACAATTAGTGCCTTCATCACACCTGCCACCCCCAAAGTTAAGGATTC
CT
AATGTTTTCAGTATAAGTGTAGCACTAGCCAAAAGGCACTTAAGCCAGCCACAGTTAAGCTCTGACAG
G
ATGTTTGGTACAAATAGAAACGCTATAAGCATGATACGACCACTGAGACCTCAGGAAACTGATCTTGAT
CTA
GTTGATGGAGACAGTACAGAAGTTTTAGAGAATATGGACACGAGTTGTGATGATGGATTATTTTCCT
AT
GACTCCTTGGACTCTCCAAATTCAGATGACCAGGAACACTGTGACTCAGCAAAGAAGGTGGCATACAG
C
AAACCTCCAACTCCTCCCCTGCACCGTTTTCCTTCTTGGGAAAGCAGAATTTATGCTGTAGCCAAATCA
GGT
ATTCGAATGTCTGAGGCCTTCAATATGGAGAGTGTTAATAAAAATTCTGCTGCAACCCTTTCCTATA
CT
ACATCAGGACTTTATACATCTCTGATATACAAGAACATGACCACCCCAGTGTATACAACTTTGAAGGG
G
AAGGCGACCCAAATAAGTAGCAGCCCTTTCCTGGATGACTCATCTGGGTCAGAGGAAGAAGACAGCTCC
AGA
TCCAGCTCCCGGACGTCAGAGTCAGACTCACGCAGTAGGAGTGGGCCAGGCAGCCCCAGAGCCATGA
AA
CGAGGTGTGTCTCTCTCCTCTGTGGCTTCTGAAAGTGATTATGCTATTCCTCCTGATGCTTACTCCAC
A
GACACGGAGTACTCACAGCCAGAGCAGAAGCTCCCAAAAACTTGCTCATCTTCCAGTGATAATGGGAAA
AAT
GAACCACTGGAAAAATCTGGTTATTTATTAAAAATGAGTGGTAAAGTCAAGTCTTGGAAGCGGCGGT
GG
TTTGTTCTTAAAGGTGGTGAATTACTTTACTACAAATCTCCGAGTGATGTAATTAGAAAACCCCAGGG
C
CATATTGAACTTAGTGCATCCTGTAGTATTTTAAGAGGAGATAACAAACAAACAGTTCAGTTGACCACT
GAA
AAACACACATACTATCTGACTGCAGATTCTCCCAATATATTGGAAGAGTGGATTAAAGTGTTACAGA
AT
GTTCTTCGAGTACAAGCTGCCAACCCACTTTCCCTGCAGCCTGAGGGCAAACCCACCATGAAGGGATT
G
CTCACTAAGGTAAAACATGGATATTCCAAGAGAGTCTGGTGTACACTAATAGGAAAGACATTATATTAT
TTT
CGGAGTCAAGAAGATAAGTTTCCTTTAGGTCAGATCAAACTCTGGGAGGCTAAAGTGGAAGAGGTTG
AC
AGATCTTGTGATTCAGATGAAGATTATGAAGCCAGTGGACGAAGTCTGTTATCCACACATTATACTAT
C
GTTATCCATCCCAAAGACCAAGGTCCAACTTACCTCCTAATTGGATCCAAGCATGAAAAGGACACTTGG
CTT
TATCATCTGACTGTTGCAGCTGGAAGCAACAATGTAAACGTTGGATCTGAATTTGAACAACTGGTTT
GC
AAATTGCTAAATATAGACGGGGAGCCTTCCTCTCAGATATGGAGACACCCCACTTTGTGTCACAGTAA
A
GAAGGAATCATTTCCCCTCTGACAACTCTACCTTCCGAAGCCCTGCAGACAGAAGCTATTAAATTATTT
AAG
ACCTGCCAGCTTTTTATAAATGCTGCAGTTGACTCTCCTGCAATTGATTACCACATATCTTTAGCCC
AG
AGTGCTTTGCAAATCTGCCTGACACATCCTGAGCTGCAGAATGAAATTTGCTGTCAGCTTATTAAACA
G
ACAAGACGAAGACAGCCACAGAATCAACCAGGACCATTGCAGGGCTGGCAGCTCTTGGCACTCTGCGTT
GGG
CTCTTCCTTCCCCATCATCCTTTCCTGTGGCTCCTCAGGCTTCACCTAAAGAGGAATGCAGATTCCA
G
G
ACAGAATTTGGAAAATATGCCATTTACTGCCAGCGTTGTGTAGAAAGAACGCAACAAAATGGTGACAG
A
GAAGCAAGACCCTCAAGGATGGAAATTCTTTCAACTCTTCTCCGAAACCCTTATCACCATTCTTTGCCC
TTT
AGTATACCTGTGCACTTCATGAATGGGATATACCAGGTAGTTGGTTTTGACGCATCTACCACAGTGG
AA
GAATTTTTGAATACTTTGAACCAGGACACAGGAATGAGGAAACCAGCGCAGTCTGGATTTGCGTTGTT
C
ACTGACGATCCTTCTGGCAGAGATTTAGAGCATTGTCTTCAAGGAAACATCAAGATTTGTGACATTATT
TCC
AAATGGGAACAGGCTTCCAAAGAACAGCAGCCTGGAAAATGTGAAGGTACAAGGACTGTTCGTCTGA
CA
TACAAAAACAGACTATATTTCTCAGTGCAAGCTCGTGGAGAGACTGATAGAGAAAAGTTGCTGTTAAT
G
TATCAGACAAATGATCAAATCATAAATGGACTTTTTCCTCTGAACAAAGATCTGGCATTAGAAATGGCA
GCT
CTTTTATCTCAGGTAGAGATTGGAGATTTTGAAAGACCTTTCTCAACTCCAGCAGGGCATGTTACCA
AT
CAGTGCAAAGTGAATCAAACTCTAAAGCAAGTCATAGAGAAATTTTATCCTAAAAGGTATAGAGATGG
C
TGTTCTGAAGAGCAGTTAAGGCAGCTTTGCCAGCGACTTTCAACCAGATGGATGGCCCTCCGGGGACAC
AGT
GCTGCTGACTGTGTGCGCATTTATTTGACAGTAGCCAGGAAGTGGCCATTCTTTGGTGCCAAGTTGT
TT
CTTGCAAAACCCATAACTCCATCATCACTTGGAAGTACTTTCTTGTGGCTGGCTGTACATGAGGATGG
T
TTAAGCCTCTTAGAATACAACTCCATGAGGTTAATAGTCAGCTATGTGTACAAGAGTCTAATGACCTTT
GGA
GGCTATCAAGATGATTTTATGGTAGTCATTAACAATACACATTCAAAGGACAAACCAACAGAGAAAT
TA
CTTTTTGCCATGGCAAAACCCAAGATTCTTGAAATCACTCTTTTGATCGCCAGTTACATAAACAACTT
C
CATCAGCAAAAGGCAGCATTTCACCACCTCTCTGCTCCAGCACTGCTCTCAGCCCAGACCCGGGGACCC
CAA
GCCAGAATGATGGGAAGCCAGCCTCTTCTGTCAAGCAGCAGACCGACCAAAGGCCCCACCTTACTCT
GA


Translation (1493 aa):
MAELSEPEGPVDWKERCVALESQLMKFRVQASKIRELLAEKMQQLERQVIDAERQAEKAFQQVQVMEDKL
K
AANIQTSESETRLYNKCQDLESLIQEKDDVIQNLELQLEEQ
KQIRIQEAKIIEEKAAKIKEWVTVKLNE
L
ELENQNLRLINQNQTEEIRTMQSKLQ
EVQGKKSSTVSTLKLSEGQRLSSLTFGCFLSRARSPPQVVKSE
E
MSKISSKEPEFTEGKDME
EMEIPEKSVDNQVLENNRGQRTLHQTPCGSEQNRKTRTSFATDGGISQNSG
A
PVSDWSSDEEDGSKGRSKSRCTSTLSSHTSEEGVQCSRMGSEMYLTASDDSSSIFEEETFGIKRPEHKK
L
YSWQQEAQWKALNSPLGKGNSELSKKEQDSSSDELNKKFQSQRLDYSSSSSEANTPSPILTPALMPKHP
N
SLSGKGTQLVPSSHLPPPKLRIPNVFSISVALAKRHLSQPQLSSDRMFGTNRNAISMIRPLRPQETDLD
L
VDGDSTEVLENMDTSCDDGLFSYDSLDSPNSDDQEHCDSAKKVAYSKPPTPPLHRFPSW
ESRIYAVAKS
G
IRMSEAFNMESVNK
NSAATLSYTTSGLYTSLIYKNMTTPVYTTLKGKATQISSSPFLDDSSGSEEEDSS
R
SSSRTSESDSRSRSGPGSPRAMKR
GVSLSSVASESDYAIPPDAYSTDTEYSQPEQKLPKTCSSSSDNGK
N
EPLEKSGYLLKMSGKVKSWKRRWFVLKGGELLYYKSPSDVIRKPQGHIELSASCSILRGDNKQTVQLTT
E
KHTYYLTADSPNILEEWIKVLQNVLRVQAANPLSLQPEGKPTMKGLLTK
VKHGYSKRVWCTLIGKTLYY
F
RSQEDK
FPLGQIKLWEAKVEEVDRSCDSDEDYEASGRSLLSTHYTIVIHPKDQGPTYLLIGSKHEKDTW
L
YHLTVAAGSNNVNVGSEFEQLVCKLLNIDGEP
SSQIWRHPTLCHSKEGIISPLTTLPSEALQTEAIKLF
K
TCQLFINAAVDSPAIDYHISLAQSALQICLTHPELQNEICCQLIKQTRRRQPQNQPGPLQGWQLLALCV
G
LFLPHHPFLWLLRLHLKRNADS
RTEFGKYAIYCQRCVERTQQNGDREARPSRMEILSTLLRNPYHHSLP
F
SIPVHFMNGIYQ
VVGFDASTTVEEFLNTLNQDTGMRKPAQSGFALFTDDPSGRDLEHCLQGNIKICDII
S
KWEQASKEQQPGKCEGTRTVRLTYKN
RLYFSVQARGETDREKLLLMYQTNDQIINGLFPLNKDLALEMA
A
LLSQ
VEIGDFERPFSTPAGHVTNQCKVNQTLKQVIEKFYPKRYRDGCSEEQLRQLCQRLSTRWMALRGH
S
AADCVRIYLTVARKWPFFGAKLFLAK
PITPSSLGSTFLWLAVHEDGLSLLEYNSMRLIVSYVYKSLMTF
G
GYQDDFMVVINNTHSKDKPTEKLLFAMAKPK
ILEITLLIASYINNFHQQKAAFHHLSAPALLSAQTRGP
Q
ARMMGSQPLLSSSRPTKGPTLL




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser