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Report for CCDS26445.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26445.1 Public Mus musculus 13 Tubb2b 23 108 98 CCDS HistoryNCBI Gene:73710Re-query CCDS DB by CCDS ID:26445.1Re-query CCDS DB by GeneID:73710See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 26445.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000075774.4 ENSMUSP00000075178.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000075774.4Link to Ensembl Protein Viewer:ENSMUSP00000075178.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000075774Re-query CCDS DB by Protein ID:ENSMUSP00000075178
Original member Current member NCBI NM_023716.2 NP_076205.1 Accepted alive Link to Nucleotide Sequence:NM_023716.2Link to Protein Sequence:NP_076205.1Re-query CCDS DB by Nucleotide ID:NM_023716Re-query CCDS DB by Protein ID:NP_076205Link to BLAST:NP_076205.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076205.1 445 Q9CWF2 445 100% 0 0

Chromosomal Locations for CCDS 26445.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 34127471 34128531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 34128872 34128982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 34129246 34129354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 34130177 34130233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1338 nt):
ATGCGAGAGATCGTGCACATTCAGGCGGGCCAGTGCGGCAACCAGATCGGTGCCAAGTTTTGGGAGGTCA
TCAGTGATGAGCATGGTATAGACCCCACTGGAAGTTACCATGGAGACAGTGATTTGCAACTGGAAAGAAT
CAATGTATACTACAATGAAGCAACTGGTAATAAATATGTGCCTAGGGCCATCCTGGTGGACCTGGAGCCA
GGCACAATGGACTCAGTCAGGTCTGGACCATTTGGGCAGATCTTCAGGCCGGACAACTTCGTGTTCGGCC
AGAGTGGTGCAGGAAATAACTGGGCAAAGGGCCACTACACAGAGGGGGCCGAGCTGGTGGACTCTGTCCT
GGACGTGGTGAGGAAGGAGTCAGAAAGCTGTGACTGTCTTCAGGGCTTCCAGCTGACCCACTCACTGGGG
GGAGGCACTGGCTCAGGCATGGGGACCCTGCTCATCAGCAAGATCAGAGAGGAGTACCCAGACCGCATCA
TGAACACCTTCAGCGTCATGCCCTCACCCAAGGTCTCTGACACTGTGGTGGAGCCCTATAATGCCACCCT
CTCAGTGCACCAGCTGGTAGAGAACACAGATGAAACCTACTGCATCGATAATGAGGCTCTGTATGACATC
TGTTTCCGCACCCTGAAGCTGACCACACCCACCTATGGCGATCTCAACCACCTGGTGTCAGCCACCATGA
GTGGAGTGACCACCTGCCTGCGCTTCCCAGGCCAGCTGAACGCAGACCTGCGCAAGCTGGCCGTGAACAT
GGTGCCATTCCCACGCCTGCACTTCTTCATGCCAGGCTTTGCACCTCTGACCAGCCGGGGCAGCCAGCAG
TACCGAGCCCTGACGGTGCCCGAGCTGACCCAGCAGATGTTCGACTCCAAGAACATGATGGCTGCCTGCG
ACCCTCGCCATGGCCGCTACCTGACCGTGGCCGCCATTTTCCGTGGCCGCATGTCCATGAAGGAGGTGGA
TGAGCAGATGCTCAACGTGCAGAACAAGAACAGCAGCTACTTCGTGGAGTGGATCCCCAACAACGTCAAG
ACGGCCGTGTGTGACATCCCTCCTCGTGGCCTCAAGATGTCAGCCACCTTCATTGGCAACAGCACTGCCA
TCCAGGAGCTGTTCAAGCGCATCTCGGAGCAGTTCACTGCTATGTTCCGGCGCAAGGCTTTCCTGCACTG
GTACACGGGTGAGGGCATGGACGAGATGGAGTTCACCGAGGCGGAGAGCAACATGAATGACCTGGTGTCT
GAGTACCAGCAGTACCAGGATGCCACGGCTGATGAGCAGGGCGAGTTCGAGGAGGAAGAGGGCGAGGATG
AGGCTTGA

Translation (445 aa):
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEP
GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLG
GGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI
CFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQ
YRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVK
TAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADEQGEFEEEEGEDEA


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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