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Report for CCDS34681.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34681.1 Public Homo sapiens 7 SAMD9L 24 110 108 CCDS HistoryNCBI Gene:219285Re-query CCDS DB by CCDS ID:34681.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34681.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000318238.9 ENSP00000326247.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000318238.9Link to Ensembl Protein Viewer:ENSP00000326247.4Re-query CCDS DB by Nucleotide ID:ENST00000318238Re-query CCDS DB by Protein ID:ENSP00000326247
Original member Current member EBI ENST00000439952.6 ENSP00000391387.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000439952.6Link to Ensembl Protein Viewer:ENSP00000391387.2Re-query CCDS DB by Nucleotide ID:ENST00000439952Re-query CCDS DB by Protein ID:ENSP00000391387
Original member Current member EBI ENST00000446959.6 ENSP00000391699.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000446959.6Link to Ensembl Protein Viewer:ENSP00000391699.2Re-query CCDS DB by Nucleotide ID:ENST00000446959Re-query CCDS DB by Protein ID:ENSP00000391699
Original member Current member EBI ENST00000414791.6 ENSP00000396137.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000414791.6Link to Ensembl Protein Viewer:ENSP00000396137.2Re-query CCDS DB by Nucleotide ID:ENST00000414791Re-query CCDS DB by Protein ID:ENSP00000396137
Original member Current member EBI ENST00000411955.5 ENSP00000405760.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000411955.5Link to Ensembl Protein Viewer:ENSP00000405760.1Re-query CCDS DB by Nucleotide ID:ENST00000411955Re-query CCDS DB by Protein ID:ENSP00000405760
Original member Current member EBI ENST00000437805.5 ENSP00000408796.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000437805.5Link to Ensembl Protein Viewer:ENSP00000408796.1Re-query CCDS DB by Nucleotide ID:ENST00000437805Re-query CCDS DB by Protein ID:ENSP00000408796
Original member Current member EBI ENST00000446033.2 ENSP00000410062.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000446033.2Link to Ensembl Protein Viewer:ENSP00000410062.2Re-query CCDS DB by Nucleotide ID:ENST00000446033Re-query CCDS DB by Protein ID:ENSP00000410062
Original member Current member EBI ENST00000699641.1 ENSP00000514494.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000699641.1Link to Ensembl Protein Viewer:ENSP00000514494.1Re-query CCDS DB by Nucleotide ID:ENST00000699641Re-query CCDS DB by Protein ID:ENSP00000514494
Original member Current member NCBI NM_001303496.3 NP_001290425.1 Accepted alive Link to Nucleotide Sequence:NM_001303496.3Link to Protein Sequence:NP_001290425.1Re-query CCDS DB by Nucleotide ID:NM_001303496Re-query CCDS DB by Protein ID:NP_001290425Link to BLAST:NP_001290425.1
Original member Current member NCBI NM_001303497.3 NP_001290426.1 Accepted alive Link to Nucleotide Sequence:NM_001303497.3Link to Protein Sequence:NP_001290426.1Re-query CCDS DB by Nucleotide ID:NM_001303497Re-query CCDS DB by Protein ID:NP_001290426Link to BLAST:NP_001290426.1
Original member Current member NCBI NM_001303498.3 NP_001290427.1 Accepted alive Link to Nucleotide Sequence:NM_001303498.3Link to Protein Sequence:NP_001290427.1Re-query CCDS DB by Nucleotide ID:NM_001303498Re-query CCDS DB by Protein ID:NP_001290427Link to BLAST:NP_001290427.1
Original member Current member NCBI NM_001303500.3 NP_001290429.1 Accepted alive Link to Nucleotide Sequence:NM_001303500.3Link to Protein Sequence:NP_001290429.1Re-query CCDS DB by Nucleotide ID:NM_001303500Re-query CCDS DB by Protein ID:NP_001290429Link to BLAST:NP_001290429.1
Original member Current member NCBI NM_001350082.2 NP_001337011.1 Accepted alive Link to Nucleotide Sequence:NM_001350082.2Link to Protein Sequence:NP_001337011.1Re-query CCDS DB by Nucleotide ID:NM_001350082Re-query CCDS DB by Protein ID:NP_001337011Link to BLAST:NP_001337011.1
Original member Current member NCBI NM_001350083.2 NP_001337012.1 Accepted alive Link to Nucleotide Sequence:NM_001350083.2Link to Protein Sequence:NP_001337012.1Re-query CCDS DB by Nucleotide ID:NM_001350083Re-query CCDS DB by Protein ID:NP_001337012Link to BLAST:NP_001337012.1
Original member Current member NCBI NM_001350084.2 NP_001337013.1 Accepted alive Link to Nucleotide Sequence:NM_001350084.2Link to Protein Sequence:NP_001337013.1Re-query CCDS DB by Nucleotide ID:NM_001350084Re-query CCDS DB by Protein ID:NP_001337013Link to BLAST:NP_001337013.1
Original member Current member NCBI NM_001350085.2 NP_001337014.1 Accepted alive Link to Nucleotide Sequence:NM_001350085.2Link to Protein Sequence:NP_001337014.1Re-query CCDS DB by Nucleotide ID:NM_001350085Re-query CCDS DB by Protein ID:NP_001337014Link to BLAST:NP_001337014.1
Original member Current member NCBI NM_152703.5 NP_689916.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152703.5Link to Protein Sequence:NP_689916.2Re-query CCDS DB by Nucleotide ID:NM_152703Re-query CCDS DB by Protein ID:NP_689916Link to BLAST:NP_689916.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001290425.1 1584 Q8IVG5-1 1584 100% 0 0
NP_001290426.1 1584 Q8IVG5-1 1584 100% 0 0
NP_001290427.1 1584 Q8IVG5-1 1584 100% 0 0
NP_001290429.1 1584 Q8IVG5-1 1584 100% 0 0
NP_001337011.1 1584 Q8IVG5-1 1584 100% 0 0
NP_001337012.1 1584 Q8IVG5-1 1584 100% 0 0
NP_001337013.1 1584 Q8IVG5-1 1584 100% 0 0
NP_001337014.1 1584 Q8IVG5-1 1584 100% 0 0
NP_689916.2 1584 Q8IVG5-1 1584 100% 0 0

Chromosomal Locations for CCDS 34681.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 93131217 93135971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4755 nt):
ATGAGTAAACAAGTATCTCTACCTGAAATGATTAAAGACTGGACCAAAGAGCATGTGAAAAAATGGGTAA
AT
GAAGACCTTAAGATTAATGAGCAATACGGGCAAATTCTGCTCAGTGAAGAAGTAACAGGATTAGTCCT
G
CAGGAATTAACTGAGAAGGACCTTGTAGAAATGGGGCTACCATGGGGTCCAGCACTTTTGATAAAACGT
TCA
TACAACAAATTGAATAGTAAGTCCCCTGAAAGTGACAATCATGATCCGGGACAATTAGATAATTCAA
AA
CCGTCCAAAACAGAACACCAGAAAAATCCAAAACACACCAAAAAGGAAGAAGAAAATTCAATGTCATC
T
AATATTGATTATGATCCCAGAGAGATCAGAGATATCAAACAAGAAGAATCAATTCTTATGAAAGAAAAT
GTG
TTAGATGAAGTAGCAAATGCTAAACACAAGAAAAAGGGTAAGCTAAAACCTGAACAATTGACTTGTA
TG
CCATATCCTTTTGATCAGTTCCATGACAGCCATCGCTACATAGAACATTATACTCTACAACCTGAAAC
A
GGAGCACTCAATCTCATTGATCCAATACATGAGTTCAAAGCTCTCACAAACACAGAAACAGCCACGGAA
GTG
GACATTAAGATGAAATTCAGCAATGAAGTCTTCCGATTTGCATCAGCTTGTATGAATTCACGCACCA
AT
GGCACCATCCATTTTGGAGTCAAGGACAAACCCCATGGAGAAATTGTTGGTGTGAAAATCACCAGTAA
G
GCTGCCTTCATTGACCACTTCAATGTAATGATCAAAAAGTATTTTGAAGAAAGTGAGATCAATGAAGCC
AAG
AAGTGTATTCGGGAGCCAAGGTTTGTGGAAGTCCTTCTGCAGAACAATACACCATCTGACAGATTTG
TC
ATTGAAGTTGATACTATTCCAAAACACTCTATATGTAATGATAAGTATTTCTACATTCAGATGCAAAT
T
TGTAAAGATAAAATATGGAAACAAAACCAAAATCTTTCACTGTTTGTAAGAGAAGGGGCTAGCTCTAGG
GAT
ATCCTGGCCAATTCCAAGCAACGGGATGTAGATTTCAAGGCATTTTTACAAAATTTAAAGTCACTGG
TA
GCATCTAGAAAAGAGGCTGAAGAAGAGTATGGAATGAAGGCAATGAAGAAGGAGAGTGAAGGACTAAA
G
CTGGTTAAACTTCTCATAGGAAACCGAGACTCACTGGATAATTCATACTATGACTGGTACATTCTTGTA
ACA
AATAAATGCCATCCAAACCAAATAAAGCACTTAGATTTTTTAAAAGAAATTAAATGGTTTGCTGTGT
TG
GAGTTTGATCCTGAATCTATGATCAATGGAGTGGTCAAAGCTTACAAAGAAAGTCGGGTGGCAAACCT
T
CACTTTCCAAATCAATATGAAGACAAGACAACTAACATGTGGGAGAAGATTTCTACTCTTAATCTTTAC
CAA
CAGCCCAGCTGGATTTTCTGCAACGGCAGATCAGACCTGAAAAGCGAGACATATAAACCTCTAGAAC
CA
CATTTATGGCAGAGAGAAAGAGCTTCAGAAGTCAGGAAACTAATTTTATTTCTCACAGATGAAAATAT
A
ATGACAAGAGGAAAATTTTTGGTAGTGTTTCTATTACTCTCTTCAGTGGAAAGCCCAGGAGATCCACTC
ATT
GAAACTTTCTGGGCTTTCTATCAAGCTCTCAAAGGAATGGAAAATATGTTGTGTATCTCTGTAAACT
CA
CATATTTATCAACGATGGAAAGATCTACTACAAACAAGAATGAAGATGGAAGATGAACTAACAAACCA
C
AGTATTTCCACTTTAAATATAGAACTGGTAAACAGCACTATCCTTAAACTAAAATCGGTGACTCGGTCA
TCA
AGAAGGTTTTTGCCCGCCCGTGGATCTTCTTCAGTTATCCTAGAGAAAAAGAAAGAGGATGTCTTGA
CT
GCACTGGAAATCCTCTGTGAAAATGAGTGTACAGAGACAGACATCGAGAAAGACAAATCTAAATTCCT
G
GAGTTTAAGAAATCAAAAGAAGAACACTTTTATCGAGGTGGCAAAGTATCCTGGTGGAACTTCTATTTT
TCT
TCTGAAAACTATTCTTCAGATTTTGTTAAAAGGGACAGTTATGAAAAGCTTAAAGATTTAATACACT
GC
TGGGCAGAGTCTCCTAAACCAATATTTGCAAAAATCATCAATCTTTATCATCATCCAGGCTGTGGAGG
T
ACCACACTGGCTATGCATGTTCTCTGGGACTTAAAGAAAAACTTCAGATGTGCTGTGTTAAAAAACAAG
ACA
ACTGATTTTGCAGAAATTGCAGAGCAAGTGATCAATCTGGTCACCTATAGGGCAAAGAGCCATCAGG
AT
TACATTCCTGTGCTTCTCCTTGTGGATGATTTTGAAGAACAAGAAAATGTCTACTTTCTACAAAATGC
C
ATCCATTCCGTTTTAGCAGAAAAGGATTTGCGATATGAAAAAACATTGGTAATTATCTTAAACTGCATG
AGA
TCCCGGAATCCAGATGAAAGTGCAAAATTGGCAGACAGTATTGCACTAAATTACCAACTTTCTTCCA
AG
GAACAAAGAGCTTTTGGTGCCAAACTGAAGGAAATTGAAAAGCAGCACAAGAACTGTGAAAACTTTTA
T
TCCTTCATGATCATGAAAAGCAATTTTGATGAAACATATATAGAAAATGTAGTCAGGAATATCCTAAAA
GGA
CAGGATGTTGACAGCAAGGAAGCACAACTCATTTCCTTCCTGGCTTTACTCAGCTCTTATGTTACTG
AC
TCTACAATTTCAGTTTCACAGTGTGAAATATTTTTGGGAATCATATACACTAGTACACCCTGGGAACC
T
GAAAGCTTAGAAGACAAGATGGGAACTTATTCTACACTTCTAATAAAAACAGAAGTTGCAGAATATGGG
AGA
TACACAGGTGTGCGTATCATTCACCCTCTGATTGCCCTGTACTGTCTAAAAGAACTGGAAAGAAGCT
AT
CACTTGGATAAATGTCAAATTGCATTGAATATATTAGAAGAGAATTTATTCTATGATTCTGGAATAGG
A
AGAGACAAATTTCAACATGATGTTCAAACTCTTCTGCTTACAAGACAGCGCAAGGTGTATGGAGATGAA
ACA
GACACTCTGTTTTCCCCATTAATGGAAGCTTTACAGAATAAAGACATTGAAAAGGTCTTGAGTGCAG
GA
AGTAGACGATTCCCACAAAATGCATTCATTTGTCAAGCCTTAGCAAGACATTTCTACATTAAAGAGAA
G
GACTTTAACACAGCTCTGGACTGGGCACGTCAGGCCAAAATGAAAGCACCTAAAAATTCCTATATTTCA
GAT
ACACTAGGTCAAGTCTACAAAAGTGAAATCAAATGGTGGTTGGATGGGAACAAAAACTGTAGGAGCA
TT
ACTGTTAATGACCTAACACATCTCCTAGAAGCTGCGGAAAAAGCCTCAAGAGCTTTCAAAGAATCCCA
A
AGGCAAACTGATAGTAAAAACTATGAAACCGAGAACTGGTCACCACAGAAGTCCCAGAGACGATATGAC
ATG
TATAACACAGCTTGTTTCTTGGGTGAAATAGAAGTTGGTCTTTACACTATCCAGATTCTTCAGCTCA
CT
CCCTTTTTCCACAAAGAAAATGAATTATCCAAAAAACATATGGTGCAATTTTTATCAGGAAAGTGGAC
C
ATTCCTCCTGATCCCAGAAATGAATGTTATTTGGCTCTTAGCAAGTTCACATCCCACCTAAAAAATTTA
CAA
TCAGATCTGAAAAGGTGCTTTGACTTTTTTATTGATTATATGGTTCTTCTGAAAATGAGGTATACCC
AA
AAAGAAATTGCAGAAATCATGTTAAGCAAGAAAGTCAGTCGTTGTTTCAGGAAATACACAGAACTTTT
C
TGTCATTTGGATCCATGTCTATTACAAAGTAAAGAGAGTCAATTACTCCAGGAGGAGAATTGCAGGAAA
AAG
CTAGAAGCTCTGAGAGCAGATAGGTTTGCTGGACTCTTGGAATATCTTAATCCAAACTACAAAGATG
CT
ACCACCATGGAAAGTATAGTGAATGAATATGCCTTCCTACTGCAGCAAAACTCAAAAAAGCCCATGAC
A
AATGAGAAACAAAATTCCATTTTGGCCAACATTATTCTGAGTTGTCTAAAGCCCAACTCCAAGTTAATT
CAA
CCACTTACCACGCTAAAAAAACAACTCCGAGAGGTCTTGCAATTTGTAGGACTAAGTCATCAATATC
CA
GGTCCTTATTTCTTGGCCTGCCTCCTGTTCTGGCCAGAAAATCAAGAGCTAGATCAAGATTCCAAACT
A
ATAGAAAAGTATGTTTCATCCTTAAATAGATCCTTCAGGGGACAGTACAAGCGCATGTGCAGGTCCAAG
CAG
GCAAGCACACTTTTCTATCTGGGCAAAAGGAAGGGTCTAAACAGTATTGTTCACAAGGCCAAAATAG
AG
CAGTACTTTGATAAAGCACAAAATACAAATTCCCTCTGGCACAGTGGGGATGTGTGGAAAAAAAATGA
A
GTCAAAGACCTCCTGCGTCGTCTAACTGGTCAGGCTGAAGGCAAGCTAATCTCTGTAGAATATGGAACA
GAG
GAAAAAATAAAAATACCAGTAATATCTGTTTATTCAGGTCCACTCAGAAGTGGTAGGAACATAGAAA
GA
GTGTCTTTCTACCTAGGATTTTCCATTGAAGGCCCTCTGGCATATGATATAGAAGTAATTTAA


Translation (1584 aa):
MSKQVSLPEMIKDWTKEHVKKWVNEDLKINEQYGQILLSEEVTGLVLQELTEKDLVEMGLPWGPALLIKR
S
YNKLNSKSPESDNHDPGQLDNSKPSKTEHQKNPKHTKKEEENSMSSNIDYDPREIRDIKQEESILMKEN
V
LDEVANAKHKKKGKLKPEQLTCMPYPFDQFHDSHRYIEHYTLQPETGALNLIDPIHEFKALTNTETATE
V
DIKMKFSNEVFRFASACMNSRTNGTIHFGVKDKPHGEIVGVKITSKAAFIDHFNVMIKKYFEESEINEA
K
KCIREPRFVEVLLQNNTPSDRFVIEVDTIPKHSICNDKYFYIQMQICKDKIWKQNQNLSLFVREGASSR
D
ILANSKQRDVDFKAFLQNLKSLVASRKEAEEEYGMKAMKKESEGLKLVKLLIGNRDSLDNSYYDWYILV
T
NKCHPNQIKHLDFLKEIKWFAVLEFDPESMINGVVKAYKESRVANLHFPNQYEDKTTNMWEKISTLNLY
Q
QPSWIFCNGRSDLKSETYKPLEPHLWQRERASEVRKLILFLTDENIMTRGKFLVVFLLLSSVESPGDPL
I
ETFWAFYQALKGMENMLCISVNSHIYQRWKDLLQTRMKMEDELTNHSISTLNIELVNSTILKLKSVTRS
S
RRFLPARGSSSVILEKKKEDVLTALEILCENECTETDIEKDKSKFLEFKKSKEEHFYRGGKVSWWNFYF
S
SENYSSDFVKRDSYEKLKDLIHCWAESPKPIFAKIINLYHHPGCGGTTLAMHVLWDLKKNFRCAVLKNK
T
TDFAEIAEQVINLVTYRAKSHQDYIPVLLLVDDFEEQENVYFLQNAIHSVLAEKDLRYEKTLVIILNCM
R
SRNPDESAKLADSIALNYQLSSKEQRAFGAKLKEIEKQHKNCENFYSFMIMKSNFDETYIENVVRNILK
G
QDVDSKEAQLISFLALLSSYVTDSTISVSQCEIFLGIIYTSTPWEPESLEDKMGTYSTLLIKTEVAEYG
R
YTGVRIIHPLIALYCLKELERSYHLDKCQIALNILEENLFYDSGIGRDKFQHDVQTLLLTRQRKVYGDE
T
DTLFSPLMEALQNKDIEKVLSAGSRRFPQNAFICQALARHFYIKEKDFNTALDWARQAKMKAPKNSYIS
D
TLGQVYKSEIKWWLDGNKNCRSITVNDLTHLLEAAEKASRAFKESQRQTDSKNYETENWSPQKSQRRYD
M
YNTACFLGEIEVGLYTIQILQLTPFFHKENELSKKHMVQFLSGKWTIPPDPRNECYLALSKFTSHLKNL
Q
SDLKRCFDFFIDYMVLLKMRYTQKEIAEIMLSKKVSRCFRKYTELFCHLDPCLLQSKESQLLQEENCRK
K
LEALRADRFAGLLEYLNPNYKDATTMESIVNEYAFLLQQNSKKPMTNEKQNSILANIILSCLKPNSKLI
Q
PLTTLKKQLREVLQFVGLSHQYPGPYFLACLLFWPENQELDQDSKLIEKYVSSLNRSFRGQYKRMCRSK
Q
ASTLFYLGKRKGLNSIVHKAKIEQYFDKAQNTNSLWHSGDVWKKNEVKDLLRRLTGQAEGKLISVEYGT
E
EKIKIPVISVYSGPLRSGRNIERVSFYLGFSIEGPLAYDIEVI




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser