NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS40153.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40153.1 Public Mus musculus 7 Mcmbp 23 108 98 CCDS HistoryNCBI Gene:210711Re-query CCDS DB by CCDS ID:40153.1Re-query CCDS DB by GeneID:210711See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 40153.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057557.13 ENSMUSP00000062843.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057557.13Link to Ensembl Protein Viewer:ENSMUSP00000062843.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000057557Re-query CCDS DB by Protein ID:ENSMUSP00000062843
Original member Current member NCBI NM_145955.3 NP_666067.1 Accepted alive Link to Nucleotide Sequence:NM_145955.3Link to Protein Sequence:NP_666067.1Re-query CCDS DB by Nucleotide ID:NM_145955Re-query CCDS DB by Protein ID:NP_666067Link to BLAST:NP_666067.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666067.1 642 Q8R3C0 642 100% 0 0

Chromosomal Locations for CCDS 40153.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 128698444 128698570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128699319 128699407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128702243 128702407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128703495 128703628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128704479 128704644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128707048 128707165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128709082 128709205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128709782 128709960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128712664 128712764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128714399 128714550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128715946 128716090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128720565 128720666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128723936 128723977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128724068 128724208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128725113 128725198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128740133 128740190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1929 nt):
ATGCCCTGTGGAGAAGATTGGCTGAGCCACCCGCTCGGGATCGTGCAAGGCTTCTTCGCACAAAATGGAG
TTAATCCTGACTGGGAGAAGAAGGTTATTGAATACTTCAAGGAAAAGCTGAAGGAAAATAATGCTCCTAA
ATGGGTGCCATCGCTGAACGAAGTGCCCCTCCATTATCTGAAGCCCAACAGCTTTGTCAAGTTTCGTTGC
ATGATTCAGGATATGTTTGACCCTGAGTTTTACATGGGAATTTATGAGACAGTTAACCAGAACACAAAAG
CACGCGTTCTTCATTTTGGAAAATACAGAGATGTAGCAGAATGTGGGCCTCAACAAGAACTTGACTTGAG
CTCTCCAAGGTCTACCACTTCGGAAAGACAGACCTTCTACTGTGTCCCCGTGCCCGGGGAGTCTTCGTGG
GTCAAAGAGGCCTATGTCAATGCGAACCAAGCTCGAGTCAGTCCCTCGACCTCCTACACTCCCAGTAGGC
ACAAGAGGAGTTATGAAGATGACGAGGACATGGACCTACAGCCCAGTAAACAGAAGGAGCAGCATCCAGG
CTCCCGGCAAGCAGGAGGCCTCGGGGGCCTTCACTGGTGCGGAGAGCCAAAACGCTTAGAAACTGAAGCT
TCCTCTGGACAGCAGCTGAACACCTTGAACCTCTCTTCCCCGTTTGATCTGAACTTTCCTCTGCCAGGAG
AAAAGGGTCCTGCCTGCCTTGTTAAGGTCTACGAAGATTGGGATTGCTTCAAAGTCAATGATGTCCTTGA
GTTATACGGTGTGCTCTCTGTGGATCCTGTCCTGAGCGTACTGAATAGTGAGGAAAGGGATGCCTCTGCA
CTGCTGGACCCCATGGAGTGCACAGACATGGCTGAAGAGCAGAGAGTGCACAGCCCACCCGCTTCACTAG
TGCCAAGAATTCATGTGATTTTAGCTCAGAAGTTGCAGCACATCAATCCGTTGTTACCCACTTGCCTTAA
CAAGGAGGAGAGCAGAAGCTGTCAGTTTGTGTCCAATTTCATGTCTGAGTTGTCTCCAGTCAGAGCAGAG
CTGCTTGGATTCCTCACTCACGCACTCTTGGGAGATAGTTTGGCTGCTGAATATCTTATATTGCATCTCA
TCTCTACAGTGTATACAAGAAGAGATGTACTTCCTCTAGGAAAATTTACAGTTAACCTGAGTGGTTGCCC
GCAGAACAGTACCTTCACGGAACACCTCTACCGGATCATCCAACATCTTGTCCCAGCATCTTTTCGTCTA
CAGATGACAATAGAAAACATGAACCAGTTGAAGCTCATTCCCCACAAAGACTACACAGCCAACCGACTGG
TCAGTGGCCTCCTTCAGCTGCCCAACAATACTTCCCTGGTCATTGACGAGACTCTTCTGGAGCAAGGGCA
GTTGGACACGCCAGGTGTTCATAACGTAACTGCCCTGAGCAACCTGATAACCTGGCAGAAGGTGGATTAC
GACTTCAGCTATCACCAGATGGAGTTCCCATGCAATATCAATGTTCTCATCACATCTGAGGGAAGGTCAC
TACTTCCGGCAGACTGCCAGATTCACCTGCAGCCCCAGCTGATACCACCCAACATGGAGGAGTACATGAA
CGGCCTGCTCTCAGCTGTGCTGCCGTCCGTGCTCAACAAGTTCCGGATCTACCTGACCTTGTTGAGATTC
CTGGATTACAACCTATCAGACGACATAACCAAGGCGGTTGAAGATGATTTTGTGGAAATGCGTAAAGATG
ACCCTCAGAGCATCACGGCTGATGACCTCCACCAGCTGCTTGTGGTGGCTCGATTCCTGTCTCTGAGCGT
CGGTCAGACAACACTCTCCAGAGAGCGCTGGCTCAGAGCAAAGCAGCTGGAGCTCTCCAGGAAGGCCCGG
CTTCAGCAGCAGAAGAGTGTGAATGGGAACGAGCTTTAG

Translation (642 aa):
MPCGEDWLSHPLGIVQGFFAQNGVNPDWEKKVIEYFKEKLKENNAPKWVPSLNEVPLHYLKPNSFVKFRC
MIQDMFDPEFYMGIYETVNQNTKARVLHFGKYRDVAECGPQQELDLSSPRSTTSERQTFYCVPVPGESSW
VKEAYVNANQARVSPSTSYTPSRHKRSYEDDEDMDLQPSKQKEQHPGSRQAGGLGGLHWCGEPKRLETEA
SSGQQLNTLNLSSPFDLNFPLPGEKGPACLVKVYEDWDCFKVNDVLELYGVLSVDPVLSVLNSEERDASA
LLDPMECTDMAEEQRVHSPPASLVPRIHVILAQKLQHINPLLPTCLNKEESRSCQFVSNFMSELSPVRAE
LLGFLTHALLGDSLAAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPQNSTFTEHLYRIIQHLVPASFRL
QMTIENMNQLKLIPHKDYTANRLVSGLLQLPNNTSLVIDETLLEQGQLDTPGVHNVTALSNLITWQKVDY
DFSYHQMEFPCNINVLITSEGRSLLPADCQIHLQPQLIPPNMEEYMNGLLSAVLPSVLNKFRIYLTLLRF
LDYNLSDDITKAVEDDFVEMRKDDPQSITADDLHQLLVVARFLSLSVGQTTLSRERWLRAKQLELSRKAR
LQQQKSVNGNEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH