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Report for CCDS40153.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
40153.1 |
Public |
Mus musculus |
7 |
Mcmbp |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:210711](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:40153.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:210711](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 7 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Provisional (this record has not been manually reviewed by the collaboration) Sequence IDs included in CCDS 40153.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000057557.13 |
ENSMUSP00000062843.7 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000057557.13](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000062843.7](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000057557](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000062843](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_145955.3 |
NP_666067.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_145955.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_666067.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_145955](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_666067](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_666067.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_666067.1 |
642 |
Q8R3C0 |
642 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 40153.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1929 nt): ATGCCCTGTGGAGAAGATTGGCTGAGCCACCCGCTCGGGATCGTGCAAGGCTTCTTCGCACAAAATGGAG TTAATCCTGACTGGGAGAAGAAGGTTATTGAATACTTCAAGGAAAAGCTGAAGGAAAATAATGCTCCTAA ATGGGTGCCATCGCTGAACGAAGTGCCCCTCCATTATCTGAAGCCCAACAGCTTTGTCAAGTTTCGTTGC ATGATTCAGGATATGTTTGACCCTGAGTTTTACATGGGAATTTATGAGACAGTTAACCAGAACACAAAAG CACGCGTTCTTCATTTTGGAAAATACAGAGATGTAGCAGAATGTGGGCCTCAACAAGAACTTGACTTGAG CTCTCCAAGGTCTACCACTTCGGAAAGACAGACCTTCTACTGTGTCCCCGTGCCCGGGGAGTCTTCGTGG GTCAAAGAGGCCTATGTCAATGCGAACCAAGCTCGAGTCAGTCCCTCGACCTCCTACACTCCCAGTAGGC ACAAGAGGAGTTATGAAGATGACGAGGACATGGACCTACAGCCCAGTAAACAGAAGGAGCAGCATCCAGG CTCCCGGCAAGCAGGAGGCCTCGGGGGCCTTCACTGGTGCGGAGAGCCAAAACGCTTAGAAACTGAAGCT TCCTCTGGACAGCAGCTGAACACCTTGAACCTCTCTTCCCCGTTTGATCTGAACTTTCCTCTGCCAGGAG AAAAGGGTCCTGCCTGCCTTGTTAAGGTCTACGAAGATTGGGATTGCTTCAAAGTCAATGATGTCCTTGA GTTATACGGTGTGCTCTCTGTGGATCCTGTCCTGAGCGTACTGAATAGTGAGGAAAGGGATGCCTCTGCA CTGCTGGACCCCATGGAGTGCACAGACATGGCTGAAGAGCAGAGAGTGCACAGCCCACCCGCTTCACTAG TGCCAAGAATTCATGTGATTTTAGCTCAGAAGTTGCAGCACATCAATCCGTTGTTACCCACTTGCCTTAA CAAGGAGGAGAGCAGAAGCTGTCAGTTTGTGTCCAATTTCATGTCTGAGTTGTCTCCAGTCAGAGCAGAG CTGCTTGGATTCCTCACTCACGCACTCTTGGGAGATAGTTTGGCTGCTGAATATCTTATATTGCATCTCA TCTCTACAGTGTATACAAGAAGAGATGTACTTCCTCTAGGAAAATTTACAGTTAACCTGAGTGGTTGCCC GCAGAACAGTACCTTCACGGAACACCTCTACCGGATCATCCAACATCTTGTCCCAGCATCTTTTCGTCTA CAGATGACAATAGAAAACATGAACCAGTTGAAGCTCATTCCCCACAAAGACTACACAGCCAACCGACTGG TCAGTGGCCTCCTTCAGCTGCCCAACAATACTTCCCTGGTCATTGACGAGACTCTTCTGGAGCAAGGGCA GTTGGACACGCCAGGTGTTCATAACGTAACTGCCCTGAGCAACCTGATAACCTGGCAGAAGGTGGATTAC GACTTCAGCTATCACCAGATGGAGTTCCCATGCAATATCAATGTTCTCATCACATCTGAGGGAAGGTCAC TACTTCCGGCAGACTGCCAGATTCACCTGCAGCCCCAGCTGATACCACCCAACATGGAGGAGTACATGAA CGGCCTGCTCTCAGCTGTGCTGCCGTCCGTGCTCAACAAGTTCCGGATCTACCTGACCTTGTTGAGATTC CTGGATTACAACCTATCAGACGACATAACCAAGGCGGTTGAAGATGATTTTGTGGAAATGCGTAAAGATG ACCCTCAGAGCATCACGGCTGATGACCTCCACCAGCTGCTTGTGGTGGCTCGATTCCTGTCTCTGAGCGT CGGTCAGACAACACTCTCCAGAGAGCGCTGGCTCAGAGCAAAGCAGCTGGAGCTCTCCAGGAAGGCCCGG CTTCAGCAGCAGAAGAGTGTGAATGGGAACGAGCTTTAG
Translation (642 aa): MPCGEDWLSHPLGIVQGFFAQNGVNPDWEKKVIEYFKEKLKENNAPKWVPSLNEVPLHYLKPNSFVKFRC MIQDMFDPEFYMGIYETVNQNTKARVLHFGKYRDVAECGPQQELDLSSPRSTTSERQTFYCVPVPGESSW VKEAYVNANQARVSPSTSYTPSRHKRSYEDDEDMDLQPSKQKEQHPGSRQAGGLGGLHWCGEPKRLETEA SSGQQLNTLNLSSPFDLNFPLPGEKGPACLVKVYEDWDCFKVNDVLELYGVLSVDPVLSVLNSEERDASA LLDPMECTDMAEEQRVHSPPASLVPRIHVILAQKLQHINPLLPTCLNKEESRSCQFVSNFMSELSPVRAE LLGFLTHALLGDSLAAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPQNSTFTEHLYRIIQHLVPASFRL QMTIENMNQLKLIPHKDYTANRLVSGLLQLPNNTSLVIDETLLEQGQLDTPGVHNVTALSNLITWQKVDY DFSYHQMEFPCNINVLITSEGRSLLPADCQIHLQPQLIPPNMEEYMNGLLSAVLPSVLNKFRIYLTLLRF LDYNLSDDITKAVEDDFVEMRKDDPQSITADDLHQLLVVARFLSLSVGQTTLSRERWLRAKQLELSRKAR LQQQKSVNGNEL
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