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Report for CCDS21782.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21782.1 Public Mus musculus 7 Acsm2 23 108 98 CCDS HistoryNCBI Gene:233799Re-query CCDS DB by CCDS ID:21782.1Re-query CCDS DB by GeneID:233799See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21782.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000167935.9 ENSMUSP00000126670.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000167935.9Link to Ensembl Protein Viewer:ENSMUSP00000126670.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000167935Re-query CCDS DB by Protein ID:ENSMUSP00000126670
Original member Current member NCBI NM_146197.4 NP_666309.1 Accepted alive Link to Nucleotide Sequence:NM_146197.4Link to Protein Sequence:NP_666309.1Re-query CCDS DB by Nucleotide ID:NM_146197Re-query CCDS DB by Protein ID:NP_666309Link to BLAST:NP_666309.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666309.1 575 Q8K0L3-1 575 100% 0 0

Chromosomal Locations for CCDS 21782.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 119563505 119563681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119573113 119573323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119573552 119573759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119575610 119575756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119578082 119578235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119580356 119580435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119580613 119580736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119582706 119582786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119588821 119588922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119591027 119591154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119591263 119591362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119592223 119592342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119595914 119596009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1728 nt):
ATGCATCATCTATGGAAAATTCCAAGACTTTTCACTCTCTGGGGGAATGAGATTTCCTGCCGTACTTTCC
ATATGAATATCAAGAAACTAATACCCATACAGTGGGGCCACCAGGAAGCACCTGCCAAGTTCAACTTCGC
TAGTGATGTGATAGATCACTGGGCCAGCGTAGAGAAGGCTGGCAAGAGATCTTCAGGTCCAGCCCTGTGG
TGGATGAATGGCAGTGGGAAAGAAATAAAGTGGAGCTTCCGAGAACTGAGTGAAGCCAGTAAACAAACGG
CCAATGTTCTCTCGGGAGCCTGTGGCCTACATCGTGGGGACCGTGTGGCAGTAGTGCTTCCCCGAATCCC
AGAGTGGTGGCTGATGATCCTGGGCTGCATGCGGACAGGCCTTGTTTTCATGCCTGGGACCATCCAGATG
AGATCCTCAGACATACTCTACAGGCTGCAGGCATCCAAGGCCAGGGCCATTGTGGCTGGGGACGAAGTAG
CTCAGGAAGTGGATGCTGTGGCCCCTGACTGCTCTTTTCTGAAAATCAAGTTGCTGGTGTCTGAAAACAG
TCGAGAAGGATGGCTAAACTTCAAGGCATTGCTAAAAGAGGCATCCACCATTCATCAGTGTGTGGAGACA
GAAAGCCGAGAATCAGCAGCCATCTACTTCACTAGTGGGACCAGTGGCCCTCCCAAGATGGCAGAACACT
CCCACTGCAGCCTGGGCATCAAGGCCAAGATGGATGCTGCCAGCTGGACAGGCCTGAGTACTTCTGACAT
AATATGGACCATCTCAGACACGGCTTGGATAATGAACATTTTAGGAGCGTTTCTGGAACCTTGGGTATTG
GGAGCATGCATATTTGTCCATCTTTTGCCAAAGTTTGATTCACAAACTGTTCTAAAGGTGCTTTCCAGCT
ATCCCATCAATACCCTGGTGGGTGCCCCCATCATTTACCGGATGTTGCTACAACAGGATCTTTCCAGTTA
CAAATTTCCACATCTGCATAGCTGCTTCAGTGGAGGAGAGACCCTTCTCCCAGAGACTCTGGAGAACTGG
AAAGCCAAGACAGGACTGGAAATCCGAGAAATCTATGGCCAGACAGAAACGGGACTTATCTGCAGAGTTT
CCAGGACAATGAAAGTCAAACCAGGCTACCTGGGAACAGCCTTTGCTCACTATGATGTACAGGTCATAGA
TGAGCAGGGCAATGTTCTGCCCCCTGGCAAGGAAGGAGACATAGCTATCAGGGTGAAGCCCATCTGGCCT
ATCGGCATGTTCTCTGGATATGTGGACAATCCCAAGAAGACACAGGATAATATTCGAGGAGACTTTTGGC
TTATGGGAGACCGGGGAATCAAGGATCCAGAAGGGTATTTCCACTTCATAGGGCGGTCAGACGATATCAT
TAATTCCAGTGGGTACCGGATTGGACCTTCCGAGGTGGAAAATGCACTGATGGAGCATCCTGCCGTAAGC
GAAACAGCAGTGATCAGCAGCCCAGACCCTTCCAGAGGAGAGGTGGTGAAGGCATTTGTGGTCCTAGCCC
CTGAATTCCTGTCCCATGACCGAGACCAGCTCACTAAGGTGCTTCAGGAGCACGTGAAGTCAGTGACAGC
ACCCTACAAGTACCCCAGGAAGGTGGAGTTCGTCTTAGACCTGCCCAAGACCGTCACAGGAAAAATTGAG
CGAGCAAAGCTTCGAGCCAAGGAATGGAAAACATCAGGACGAGCCTAG

Translation (575 aa):
MHHLWKIPRLFTLWGNEISCRTFHMNIKKLIPIQWGHQEAPAKFNFASDVIDHWASVEKAGKRSSGPALW
WMNGSGKEIKWSFRELSEASKQTANVLSGACGLHRGDRVAVVLPRIPEWWLMILGCMRTGLVFMPGTIQM
RSSDILYRLQASKARAIVAGDEVAQEVDAVAPDCSFLKIKLLVSENSREGWLNFKALLKEASTIHQCVET
ESRESAAIYFTSGTSGPPKMAEHSHCSLGIKAKMDAASWTGLSTSDIIWTISDTAWIMNILGAFLEPWVL
GACIFVHLLPKFDSQTVLKVLSSYPINTLVGAPIIYRMLLQQDLSSYKFPHLHSCFSGGETLLPETLENW
KAKTGLEIREIYGQTETGLICRVSRTMKVKPGYLGTAFAHYDVQVIDEQGNVLPPGKEGDIAIRVKPIWP
IGMFSGYVDNPKKTQDNIRGDFWLMGDRGIKDPEGYFHFIGRSDDIINSSGYRIGPSEVENALMEHPAVS
ETAVISSPDPSRGEVVKAFVVLAPEFLSHDRDQLTKVLQEHVKSVTAPYKYPRKVEFVLDLPKTVTGKIE
RAKLRAKEWKTSGRA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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