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Report for CCDS24766.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24766.1 Public Mus musculus 11 Wnt3a 23 108 98 CCDS HistoryNCBI Gene:22416Re-query CCDS DB by CCDS ID:24766.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24766.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000010044.7 ENSMUSP00000010044.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000010044.7Link to Ensembl Protein Viewer:ENSMUSP00000010044.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000010044Re-query CCDS DB by Protein ID:ENSMUSP00000010044
Original member NCBI NM_009522.2 NP_033548.1 Updated not alive Link to Nucleotide Sequence:NM_009522.2Link to Protein Sequence:NP_033548.1Re-query CCDS DB by Nucleotide ID:NM_009522Re-query CCDS DB by Protein ID:NP_033548
Current member NCBI NM_009522.3 NP_033548.1 Accepted alive Link to Nucleotide Sequence:NM_009522.3Link to Protein Sequence:NP_033548.1Re-query CCDS DB by Nucleotide ID:NM_009522Re-query CCDS DB by Protein ID:NP_033548Link to BLAST:NP_033548.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033548.1 352 P27467 352 100% 0 0

Chromosomal Locations for CCDS 24766.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 59249630 59250109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59256280 59256545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59275140 59275381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59290577 59290647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1059 nt):
ATGGCTCCTCTCGGATACCTCTTAGTGCTCTGCAGCCTGAAGCAGGCTCTGGGCAGCTACCCGATCTGGT
GGTCCTTGGCTGTGGGACCCCAGTACTCCTCTCTGAGCACTCAGCCCATTCTCTGTGCCAGCATCCCAGG
CCTGGTACCGAAGCAGCTGCGCTTCTGCAGGAACTACGTGGAGATCATGCCCAGCGTGGCTGAGGGTGTC
AAAGCGGGCATCCAGGAGTGCCAGCACCAGTTCCGAGGCCGGCGTTGGAACTGCACCACCGTCAGCAACA
GCCTGGCCATCTTTGGCCCTGTTCTGGACAAAGCCACCCGGGAGTCAGCCTTTGTCCATGCCATCGCCTC
CGCTGGAGTAGCTTTCGCAGTGACACGCTCCTGTGCAGAGGGATCAGCTGCTATCTGTGGGTGCAGCAGC
CGCCTCCAGGGCTCCCCAGGCGAGGGCTGGAAGTGGGGCGGCTGTAGTGAGGACATTGAATTTGGAGGAA
TGGTCTCTCGGGAGTTTGCCGATGCCAGGGAGAACCGGCCGGATGCCCGCTCTGCCATGAACCGTCACAA
CAATGAGGCTGGGCGCCAGGCCATCGCCAGTCACATGCACCTCAAGTGCAAATGCCACGGGCTATCTGGC
AGCTGTGAAGTGAAGACCTGCTGGTGGTCGCAGCCGGACTTCCGCACCATCGGGGATTTCCTCAAGGACA
AGTATGACAGTGCCTCGGAGATGGTGGTAGAGAAACACCGAGAGTCTCGTGGCTGGGTGGAGACCCTGAG
GCCACGTTACACGTACTTCAAGGTGCCGACAGAACGCGACCTGGTCTACTACGAGGCCTCACCCAACTTC
TGCGAACCTAACCCCGAAACCGGCTCCTTCGGGACGCGTGACCGCACCTGCAATGTGAGCTCGCATGGCA
TAGATGGGTGCGACCTGTTGTGCTGCGGGCGCGGGCATAACGCGCGCACTGAGCGACGGAGGGAGAAATG
CCACTGTGTTTTCCATTGGTGCTGCTACGTCAGCTGCCAGGAGTGCACACGTGTCTATGACGTGCACACC
TGCAAGTAG

Translation (352 aa):
MAPLGYLLVLCSLKQALGSYPIWWSLAVGPQYSSLSTQPILCASIPGLVPKQLRFCRNYVEIMPSVAEGV
KAGIQECQHQFRGRRWNCTTVSNSLAIFGPVLDKATRESAFVHAIASAGVAFAVTRSCAEGSAAICGCSS
RLQGSPGEGWKWGGCSEDIEFGGMVSREFADARENRPDARSAMNRHNNEAGRQAIASHMHLKCKCHGLSG
SCEVKTCWWSQPDFRTIGDFLKDKYDSASEMVVEKHRESRGWVETLRPRYTYFKVPTERDLVYYEASPNF
CEPNPETGSFGTRDRTCNVSSHGIDGCDLLCCGRGHNARTERRREKCHCVFHWCCYVSCQECTRVYDVHT
CK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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