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Report for CCDS37524.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37524.1 Public Mus musculus 17 Bltp3a 23 108 98 CCDS HistoryNCBI Gene:224648Re-query CCDS DB by CCDS ID:37524.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37524.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000114849.2 ENSMUSP00000110499.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114849.2Link to Ensembl Protein Viewer:ENSMUSP00000110499.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000114849Re-query CCDS DB by Protein ID:ENSMUSP00000110499
Original member Current member NCBI NM_001080769.1 NP_001074238.1 Accepted alive Link to Nucleotide Sequence:NM_001080769.1Link to Protein Sequence:NP_001074238.1Re-query CCDS DB by Nucleotide ID:NM_001080769Re-query CCDS DB by Protein ID:NP_001074238Link to BLAST:NP_001074238.1

Chromosomal Locations for CCDS 37524.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 27856751 27856794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27876663 27876825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27876924 27876962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27877322 27877413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27879224 27879413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27879651 27879791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27880135 27880305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27881429 27881615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27884021 27884107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27884434 27884604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27884913 27885052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27885407 27885548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27885901 27886094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27886263 27887692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27890000 27890196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27893141 27893292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27893379 27893529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27894547 27894809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27895270 27895378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27895460 27895560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27895882 27896007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4290 nt):
ATGGCCGGGATCATTAAGAAGCAGATCTTGAAGCATCTGTCCCGGTTCACTAAGAATCTTTCCCCGGACA
AAATCAACTTGAGCACTCTGAAAGGGGAGGGTCAGCTGACCCATCTGGAGCTGGACGAAGAGGTTCTGCA
GAATGTTCTGGAATTGCCTACCTGGCTGGCCATCACTAGGGTCTACTGCAATCGGGCCTCCATCCAGATC
CAGTGGACCAAGTTGAAGACACACCCGATCTGCTTGTGTCTGGATAAGGTGGAGGTGGAGATGCAGACCT
GTGAGGACCCTCGCCCCCCCAACGGGCAGTCTCCTATCGCCCTTGCCTCGGGACAGAGTGAGTATGGCTT
TGCTGAGAAGGTGGTGGAGGGAATGTTCATTGTGGTCAACTCCATCACCATCAAGATCCACTCCAAGGCC
TTCCATGCTTCCTTTGAACTGTGGCAGCTCCAGGGTTATAGTGTCAACCCCAACTGGCAGCAGAGTGACC
TGCGTCTGACCCGCATCACTGATCCCCGCCGAGGAGAGGTTTTAACATTTAAGGAAATAACTTGGCAGAC
CCTCCGAGTTGAGGCAGACGCCATAGAAAATGGTGATCAGGACCCAGTTACCACCCCACTGAGGCTCATT
ACCAACCAAGGCCGCATCCAGATAGCCCTCAAGAGAAGAACCAAAGACTGCAATGTGGTCGCCTCCAAGT
TGACCTTCCTCCTGGACGACCTGCTCTGGGTGCTGACGGACTCACAGCTCAAGGCGATGATGAAGTACGC
CGAGTCGCTGAGTGAGGCCATGGAGAAGTCTGCCCAGCAGAGAAAGAGCCTGGCTCCTGAGTCTGTGCAG
ACCACTCCACCCGCTCCCAGTGCTCAGCAGACTTGGGCCCAGGCATTCGGTGGCAGCCAGGGCAGCAGCA
GCAGCAGTCGTCTCAGCCAGTATTTTGAGAAATTTGACGTGAAGGAGTCTTCCTACCACCTCCTCATCTC
CCGCCTGGACCTGCACATCTGCGATGACAGCCAGTCCCGAGAGCCAGGTGTCTCTGCAAACAGACTCACG
GGTGGTGCTATGCAGCTCACCTTCCGCAGGATGGCGTTTGACTACTACCCCTTCCATCGGGCAGGTGACA
GCTGTAAACACTGGGTGCGGCACTGTGAGGCCATGGAAACCCGAGGCCACTGGGCCCAGCAACTGGTGAC
AGAGTTTCAGAGTCGGGTGGAGAAGCAGTGTGAGGGGGGCAGTGTGAAGCCCCCGTGGCTGTTGGGGGTG
GACCCTCCCTTCCGGAGGAAAGCAGATTCTTTCTCTAGTCCTGGAAAGACCCCTCTGGACAAAAGCCCTA
CTCAGGGCCGGCAGGCTGCCTTTGGGGCTCCAGCATGGAATCGCTTACGCTCTAGCTGCCTGGTTGTACG
AGTAGATGACTTGGACATCCACCAGGTTTCCACAGCTGGACAGCCAAGTAAGAAGCCGTCCACTCTGCTC
TCCTGCAGCCGCAAGCGCCACCACCTCCCGCCTCAGGTGGCTGCCATCCACGTACAGTTCACAGAGTATT
ACTTCCCGGATAATCAGGAGCTTCCGGTTCCCTGTCCCAATCTCTACATCCAGTTAAACGGGCTGACGTT
TACCGTGGATCCTGTCAGCTTGCTTTGGGGAAACCTCTTTTGTCTAGATTTATACCGAAGCTTGGAGCAG
TTTAAAGCCATCTATAAGCTGGAAGCTTCGAGGGGAAGAGATGAGCACGTGGACGTCCGACTGGACGCAT
TCTGGTTGAAGGTGAGCTTCCCCCTGGAGACGAGAGAGCTGGCGAAGCTGCATCGCCCCCAGGCGCTGGT
CCTCTCCACGTCCTCCATGATTGCCACCAATACCCGGCATGCCCCGAACTGCACTCGCCCAGACCTCCAA
AGTCTCTTCCGGGGATTCGCTGCCACCGAGTTCTTTCGTTGTAGCTACGGTCACTTTCCCCAGGTGGCAG
GGGGCTTCAGCCTTCTGCACATGCTCTTCCTGCACCATGCTTTCCAGATGGACTCCCTCCCTCCTCAGAG
GCTGGCCGCATCCCAGGATCTTTGGTCCCTGCATTTCACCCAGATCTCCTTGGACTTTGAAGGCACAGAA
AACTTCAGAGGCCATACCCTGAATTTTGTGGCTCCCTTCCCCTTGTCCATTTGGGCCTGCCTTCCTCTCC
GCTGGCAGCAAGCCCAGGCACGACGGCTCCTTTTGGCTTCGGAAGGGAGGCTAAAACAGTCAGCCAGCTT
TGGCAGTCCTGTGCACTCTGAAGCCCTTGCCCCTGAGTCTGTGTCCCATCAGAGGTCAAAGACAGAGCGA
GATTTGAAGAGCCTCTCAGGCTCTACAGAAGGCCCGGCAGCGGCGGTGAGAGAAGGTGATGCTGGTGTGG
ACCACAAAGGCCGTGTGGCAGACCTGGAGGATGTGGCTGACATTCACATGCTTGTCCACTCCACCGCCCA
TGTCAGAGTGAGGCTCGACCACTACCAGTACTTGGCTCTGCTGCGCCTCAAGGAGGTGCTAGAGGGCCTT
CAGGAGCAGCTGACAAAGGACACAGAGGCCATGACCGGGTCTCCCCTGCAGGACCAGACCGTGTGCATTG
GCGTTCTCTTCCCTAGTGCCGAGGTGGCTCTCCTCATGCATCCTGCCCCTGGGACTGCTCACGCGGACTC
TGCAGGCTCAGACACCACCAGCCTCATAGACTCTGAGCTGTCACCATCCGAGGACCGGGAGCCGAAGTCT
GATGCCTCCTCAGACCAGGGCGCAGTAAGCCCCGAGAAGGTGCTGAGGGACGGCAGCGGTGAGAACCTGG
CTGCGTCCCAGGAGAGGCTGCCCAGCGATGGAGAGCTACCAGACCCAGGCCCATGTGCACAGCAGCCAGT
AGGGAAGAGCCACGAGGCGGTCGAGTCTCTCCAGGCCAAGAAGCTAAGCCGAGCTCAGAGTGCCAGGTCC
CCGGCTACGCTGAAGTCCCCGGCGGACAGGGATGCTGCTCTGAACGGCCAAGGCGAGCCCGTGCCCTTGA
GGAGCATTGAGGGGGACCTGTCCAGCGCTATTCACATGACCAAGGACGCCACCAAAGAGGCGCTTCACGC
TACCGTGGACCTCACCAAGGAGGCTGTGTCCCTGACTAGGGATGCCTTCAGTTTGGGGAGAGATCGAATG
ACTTCTACCATGCACAAGATGTTGTCCTTGCCTCCTGCCAAGGAGGCCATGGCCAAGCCAGATGAGGGGG
TGGTGGCCTCAGTGAGTGGGGGTGCTGCCCGGCTCCGGTTTTTCTCCATGAAGAGGACAGTCTCTCAGCA
GTCATTTGACGGTGTCTCGTTGGACAGCGGTGGCCCCGACGACCGGATTTCGGTGGACAGCGATGGAAGT
GACAGCTTTGTGATGCTCTTGGAGTCTGAATCTGGTCCAGAGTCTGTTCCACCAGGATCTGTCACAAGCG
TCTTGGATGATAGTGGCATCCAGGGGAGCCCTGTTACGGATAGTGGTGGCCAGGGGTTGCCAGAGACCAA
CAGCTCAGCGTCAGCCAGCGGAGACCTCGTCATGCACTCGGTGTCAATACTGGTCTTGAAGGTGAACGAA
GTATCACTTGGGATTGAGGTTCGTGGTGAGGACCTGGCTGTAGCCTTGCAAGCAGAAGAGCTGGCCCTGC
AGCAGCTGGGCACCGTGGGACTCTGGCAGTTTCTACATGGACAGTGCCCAGGCGCAGGTTTTCAAGAACC
CTCAAATCTGAAGACCAACCCCATCAGGCCTGCTGTGGGTCTGCGCTTTGAGGTGGGGCCTGGTGCAGCT
GTTCATTCCCCGCTGGCCACACAAAATGGCTTCCTGCAGTTCTTACTTCGGGGCTGTGACCTGGAGCTGT
TCACCTCAGTGCTCAACGGTCTGGGGCCTTTCTTGGAGGATGAGGAGGTCCCGGTGGTGGTCCCCATGCA
GATCGAGCTCCTGGACTGCAGGGTCACTCTCAAGGATGACATCCCTCCCGTCTACCCAACATCCCCTGGC
CCTGTCCCCATCACTTTGGCAATGGAGCGTCTTGTGCTGAAGCGAGGTGACGATGGAGTGTTTCACCTTG
GTGCTCCTGCTCACGACAGACCATTGACTGACGTGCCTGAGAAGCTGCGGCTCCCTAAAGAGCAGGTGCT
CCTGGTGCCCCTAGGCCAGGGCTTGGGATGCCAGGAGAAAGAATCGCCTACCCTCCAGCAAGAGCTTATG
GACACCAAACAAGCACTGGCCATTGCCAACCAGGACAAAGAAAAACTGCTCCAGGAGGTTAGGAAATACA
ACCCTCTCTTTGAGCTTTGA

Translation (1429 aa):
MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLTHLELDEEVLQNVLELPTWLAITRVYCNRASIQI
QWTKLKTHPICLCLDKVEVEMQTCEDPRPPNGQSPIALASGQSEYGFAEKVVEGMFIVVNSITIKIHSKA
FHASFELWQLQGYSVNPNWQQSDLRLTRITDPRRGEVLTFKEITWQTLRVEADAIENGDQDPVTTPLRLI
TNQGRIQIALKRRTKDCNVVASKLTFLLDDLLWVLTDSQLKAMMKYAESLSEAMEKSAQQRKSLAPESVQ
TTPPAPSAQQTWAQAFGGSQGSSSSSRLSQYFEKFDVKESSYHLLISRLDLHICDDSQSREPGVSANRLT
GGAMQLTFRRMAFDYYPFHRAGDSCKHWVRHCEAMETRGHWAQQLVTEFQSRVEKQCEGGSVKPPWLLGV
DPPFRRKADSFSSPGKTPLDKSPTQGRQAAFGAPAWNRLRSSCLVVRVDDLDIHQVSTAGQPSKKPSTLL
SCSRKRHHLPPQVAAIHVQFTEYYFPDNQELPVPCPNLYIQLNGLTFTVDPVSLLWGNLFCLDLYRSLEQ
FKAIYKLEASRGRDEHVDVRLDAFWLKVSFPLETRELAKLHRPQALVLSTSSMIATNTRHAPNCTRPDLQ
SLFRGFAATEFFRCSYGHFPQVAGGFSLLHMLFLHHAFQMDSLPPQRLAASQDLWSLHFTQISLDFEGTE
NFRGHTLNFVAPFPLSIWACLPLRWQQAQARRLLLASEGRLKQSASFGSPVHSEALAPESVSHQRSKTER
DLKSLSGSTEGPAAAVREGDAGVDHKGRVADLEDVADIHMLVHSTAHVRVRLDHYQYLALLRLKEVLEGL
QEQLTKDTEAMTGSPLQDQTVCIGVLFPSAEVALLMHPAPGTAHADSAGSDTTSLIDSELSPSEDREPKS
DASSDQGAVSPEKVLRDGSGENLAASQERLPSDGELPDPGPCAQQPVGKSHEAVESLQAKKLSRAQSARS
PATLKSPADRDAALNGQGEPVPLRSIEGDLSSAIHMTKDATKEALHATVDLTKEAVSLTRDAFSLGRDRM
TSTMHKMLSLPPAKEAMAKPDEGVVASVSGGAARLRFFSMKRTVSQQSFDGVSLDSGGPDDRISVDSDGS
DSFVMLLESESGPESVPPGSVTSVLDDSGIQGSPVTDSGGQGLPETNSSASASGDLVMHSVSILVLKVNE
VSLGIEVRGEDLAVALQAEELALQQLGTVGLWQFLHGQCPGAGFQEPSNLKTNPIRPAVGLRFEVGPGAA
VHSPLATQNGFLQFLLRGCDLELFTSVLNGLGPFLEDEEVPVVVPMQIELLDCRVTLKDDIPPVYPTSPG
PVPITLAMERLVLKRGDDGVFHLGAPAHDRPLTDVPEKLRLPKEQVLLVPLGQGLGCQEKESPTLQQELM
DTKQALAIANQDKEKLLQEVRKYNPLFEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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