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Report for CCDS52344.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
52344.1 |
Public |
Mus musculus |
7 |
Trim12c |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 52344.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000059037.14 |
ENSMUSP00000060100.8 |
Accepted |
alive |
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EBI |
ENSMUST00000130139.2 |
ENSMUSP00000116775.2 |
Accepted |
alive |
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NCBI |
NM_001146007.1 |
NP_001139479.1 |
Accepted |
alive |
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NCBI |
NM_175677.4 |
NP_783608.3 |
Accepted |
alive |
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Chromosomal Locations for CCDS 52344.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1494 nt): ATGGCTTCACAATTCATGAAGAATTTAAAGGAGGAAGTGACCTGTCCTCTCTGTCTGAACCTGATGGTGA AACCTGTGAGTGCAGATTGTGGTCACAGCTTCTGCCAAGGCTGCATCACGGTGTACTTTGAATCCACCAA ATGCGATAAGGAAATGTTCAGTTGCCCTGTGTGCCGACTTAGTTACCAGTCTAGCAATCTGAGGCCTAAT CTACATGTGGCCAACATAGTAGAGAGGCTCAAAGAGTTCAAGCCTAGCCCAGAAGAGGAGCAGAAAGTGT TTAACTGTGCAAGACATGGAGAGAAACTCCAGCTCTTCTGTAGGAAGGACATGATGGCCATCTGCTGGCT TTGTGAGCGATCTCAGGAGCACCGGGGCCACAAAACAGCTCTCATTGAAGAGGTGGCCCAGGAGTACAAG GAGCAGCTGCAGGTAGTTCTGCAAAGGCTGATGGCAGACAAGAAAGAATTTGAAAACTGGAAAGATGACC TTCAGAAGGATAGAACTTACTGGGAGAATCAAATACAGAAAGATGTGGAGAATGTTCAGTCAGAGTTTAA ACGAATGAGGGATATCATGAACTCTGAAGAGAAGAAGGAATTGCAGAAGCTGAAGCAAGAGAAGGAAAAC ATTATCAACAAACTGGCAGAGTCTGAAAATGAGCATGCTCAGCAGAGCAAGTTGCTAGAAGACTTCATTT CAGATGTGGAACATCAGTTACAGTGCTCAGACATAGAAATACTGCAGGGTGTGGAGAACATCATAAAACG GAGTCATACTTTTTCGATGAAGAAGCCCAAAGCCATCGCCAGGGAACAAAGAAAGTTCCGAGCCCCTGAC CTGCAAGGCATGCTGCAAGTGCTGCAAGAGGTCACAGAGGCTCAACGCTACTGGGTTCAGGTGACGCTGG TTCAAAACAACAATCCAAACATTGCCATTACTGATGACAAAAGGCAAATACGATATGAAGACCTCCAAGC AAGGAATCTTGAACATGGCTGTGAAAACTCTCATGAAGGTGTCCTGGGACACCCAGTTATCCAATCAGGA AAACATTACTGGGAAGTAGATGTGTCTGGAAAAGGTGCTTGGGTTCTGGGGTTAAGTGATGGAAGCTACC TCTTCAATCCAATATTTCGTTCAAATGCTGAAAGAAACCCTTTATTTCGCAGGGGGATTAAGAATGATTC ACATTATCAACCAAAATATGGCTTCTGGGTTATAGGGCTGTGGAAAAAGTCTGTGTATAATGCTTTTGAG GAGTGTCCTTTCACAGGCAAGCCCAGTGTCTTGACCCTGTCTCTGATGGTCCCGCCCTGTCGTGTTGGTG TTTTCCTTGACTATGCAGCTGGGACTCTCTCATTTTACAATATTTCCAACAATGGGACTCTTATCTACAG ATTCTGTACAGCTTCCTTTCCTGATAGGGTTTTTCCATATTTTAATCCCATGGGAAGTTCAGAGCCCATG ACAATTTGCTGGCCAGACTCTTAA
Translation (497 aa): MASQFMKNLKEEVTCPLCLNLMVKPVSADCGHSFCQGCITVYFESTKCDKEMFSCPVCRLSYQSSNLRPN LHVANIVERLKEFKPSPEEEQKVFNCARHGEKLQLFCRKDMMAICWLCERSQEHRGHKTALIEEVAQEYK EQLQVVLQRLMADKKEFENWKDDLQKDRTYWENQIQKDVENVQSEFKRMRDIMNSEEKKELQKLKQEKEN IINKLAESENEHAQQSKLLEDFISDVEHQLQCSDIEILQGVENIIKRSHTFSMKKPKAIAREQRKFRAPD LQGMLQVLQEVTEAQRYWVQVTLVQNNNPNIAITDDKRQIRYEDLQARNLEHGCENSHEGVLGHPVIQSG KHYWEVDVSGKGAWVLGLSDGSYLFNPIFRSNAERNPLFRRGIKNDSHYQPKYGFWVIGLWKKSVYNAFE ECPFTGKPSVLTLSLMVPPCRVGVFLDYAAGTLSFYNISNNGTLIYRFCTASFPDRVFPYFNPMGSSEPM TICWPDS
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