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Report for CCDS21327.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21327.1 Public Mus musculus 7 Mkrn3 23 108 98 CCDS HistoryNCBI Gene:22652Re-query CCDS DB by CCDS ID:21327.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21327.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000094340.3 ENSMUSP00000091898.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000094340.3Link to Ensembl Protein Viewer:ENSMUSP00000091898.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000094340Re-query CCDS DB by Protein ID:ENSMUSP00000091898
Original member Current member NCBI NM_011746.3 NP_035876.2 Accepted alive Link to Nucleotide Sequence:NM_011746.3Link to Protein Sequence:NP_035876.2Re-query CCDS DB by Nucleotide ID:NM_011746Re-query CCDS DB by Protein ID:NP_035876Link to BLAST:NP_035876.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035876.2 544 Q60764 544 100% 0 0

Chromosomal Locations for CCDS 21327.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 62418407 62420041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1635 nt):
ATGGAAGAGTCTACAGCTCCCATTGAGGCCCACGCGGCCGCCGGCGCCGAGGCAGGTGCTGAAGGGGGGG
AGGGTGTGTCTGTTCCCCCCCCTCCTCAGTTTGAGGCTGCTGGAGCTTCTGCGGGAGTCAGCTCGGCCCC
TCTGCAGCAGGCATCGGGTCTGGCACCGCTCCTGGTGACTCCAGGCCCAGCGATCCGGCGCGCGGCGAGT
TTGAGGCCAGCGCCAGCCGAAGGGGGCGGGGCCCGGTCTGGTCCGGAGCGCAACAGTGGCAGCTGGACGA
AGCAAATCCTCTGCAGGTATTATCTGCATGGGCAGTGCAAGGAGGGCGATAACTGTCGCTACTCTCACGA
CCTTTCTGGGCGGCGGAGATCTAGGGGGGGGCAAGATGCTCAGCCTCGGGCCTCTGCAGACAGAGGACCC
AAGATGGCCACTCGCTGGGAGCCCCCGACTCAGGAAGTGGCGGAAGCCCCCCCTGCTGCATCCTCAAGCT
CCTTGCCTCTGATTGGCTCGGCTGCTGAAAGGGGCTTCACTGAAGCTGAGATTGACAATGCAGGCATTCG
CTCAGCTGCTGAAAGGGGCTTCTCTGAAGCCGAGATTGACAATGCAAGCCTTGCAGCAGGTGCTGCAGCG
GGAGCGGGTGCAGAAGGCTGGGAGGGGGCAATTGAATTTGTTCCTGGACAGCCTTACCGAGGTCGCATGG
TCCCCCCGCATGGTCCCGAGGCTCCTCTGCAGAGCCCGGCAATTGAGAGAGAGCATATGGCTATGGGCAT
GGGGATGCCGATGCCAGTGCCAATGCCAATGCCAGTGCCAATGCCAGTGCCAATGCCGCTGCCGCTTTGC
CGCTATGCTGCCCGGGGACAATGCCTCCGTGGGGACAGGTGTGCATACCCCCATGGAGAAATATGCGACA
TGTGCGGGCAGCAGGCCTTGCACCCTTGGGATGCAGCTCAGCAGGAAGCTCATAGAAGGGCCTGCGTTGA
AGCACACGAGAGAGATATGGAACTCTCTTTTGCTGTGCAGCGCAGCATGGACAAAGTGTGTGGCATCTGC
ATGGAGGTGGTCTATGAGAAAGCTGACCCCAGCGACCGCCGCTTTGGCATTCTTTTCAGCTGCAACCACA
CCTACTGTCTTAGGTGTATCCGCAGGTGGAGAAGTGCCACACAGTTTGAGAACAGGATCAGTAAGTCCTG
CCCACAGTGCAGGGTCTCCTCTGGCTTTGTCATTCCTAGTGAGTTTTGGGTGGAGGAGGAAGAGGAGAAG
GAGAAACTTGTTCAGCAGTATAAGGAGGGGATGAGCCAGAAAGCGTGCAGGTATTTTGCTGGAGGCCTAG
GTCACTGCCCATTTGGAGAATTCTGTTTTTACAAGCATGAATACCCCGAGGGCTGGAGAGATCAGCCTCC
AAGACCAGATGGTGGTGGATCATCAAGCGCATACTGGCATCAAGTTTTGGAGCCTGTGCAGTTGCGAGAG
GGAAACGTGCTGTTTAAAAGCCGTAAAAAAGAGCATTCTGTGCTTCGCCTGGCCAATCAGTTGCTTAAGA
AGTTGCTTTGCCTGAGAGGCAGTTCTTCCTTCTCTGATGACCGTTGGCTCTTGCTTCAGTACCAGCTGGA
AGAATATTTCAGTTTGAATCTGTAG

Translation (544 aa):
MEESTAPIEAHAAAGAEAGAEGGEGVSVPPPPQFEAAGASAGVSSAPLQQASGLAPLLVTPGPAIRRAAS
LRPAPAEGGGARSGPERNSGSWTKQILCRYYLHGQCKEGDNCRYSHDLSGRRRSRGGQDAQPRASADRGP
KMATRWEPPTQEVAEAPPAASSSSLPLIGSAAERGFTEAEIDNAGIRSAAERGFSEAEIDNASLAAGAAA
GAGAEGWEGAIEFVPGQPYRGRMVPPHGPEAPLQSPAIEREHMAMGMGMPMPVPMPMPVPMPVPMPLPLC
RYAARGQCLRGDRCAYPHGEICDMCGQQALHPWDAAQQEAHRRACVEAHERDMELSFAVQRSMDKVCGIC
MEVVYEKADPSDRRFGILFSCNHTYCLRCIRRWRSATQFENRISKSCPQCRVSSGFVIPSEFWVEEEEEK
EKLVQQYKEGMSQKACRYFAGGLGHCPFGEFCFYKHEYPEGWRDQPPRPDGGGSSSAYWHQVLEPVQLRE
GNVLFKSRKKEHSVLRLANQLLKKLLCLRGSSSFSDDRWLLLQYQLEEYFSLNL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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