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Report for CCDS18531.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18531.1 Public Mus musculus 4 Kif2c 23 108 98 CCDS HistoryNCBI Gene:73804Re-query CCDS DB by CCDS ID:18531.1Re-query CCDS DB by GeneID:73804See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18531.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000065896.8 ENSMUSP00000064261.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000065896.8Link to Ensembl Protein Viewer:ENSMUSP00000064261.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000065896Re-query CCDS DB by Protein ID:ENSMUSP00000064261
Original member Current member NCBI NM_134471.4 NP_608301.3 Accepted alive Link to Nucleotide Sequence:NM_134471.4Link to Protein Sequence:NP_608301.3Re-query CCDS DB by Nucleotide ID:NM_134471Re-query CCDS DB by Protein ID:NP_608301Link to BLAST:NP_608301.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_608301.3 721 Q922S8 721 100% 0 0

Chromosomal Locations for CCDS 18531.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 117160167 117160382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117162010 117162114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117162213 117162318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117162603 117162670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117165142 117165252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117165358 117165562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117166312 117166454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117166881 117166972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117167049 117167112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117167294 117167384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117169835 117169997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117170085 117170139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117171717 117171812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117172285 117172385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117173602 117173721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117174886 117175008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117177921 117177969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117178145 117178246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117180572 117180666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117182431 117182491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2166 nt):
ATGGAGTCGCTTCACGCACGCCTGTTTCCTGGTCTCTCCATCAACATTCAACGCAGCAATGGCTTAATTC
ACCCCGCCAATATAAGCACAGTGAACGTGGAGAAATCCTGTGTTTCGGTGGAATGGATCGAAGGAGGTAC
CACAAAAGGCAAAGAGATTGACATTGACGATGTGGCTGCAATAAACCCAGAGCTCCTACAGCTTCTTCCC
TTACGACCGAAGGACAGTCTGCCACTGCAGGAAAACGTAACGGTCCCGAAGCAAAAACGCAAATCAGTCA
ACTCCAAAATTCCAGCTCTAAAAGAAGGCCTTCGAAGCCGCTCCACTCGCATGTCCACTGTCTCAGAAGT
TCGAATCCCTGCTCAGGAGAATGAAATGGAGGTGGAGCTGCCTGTGCCTACAAACTCTCGCAAGCAGTTT
GCCATTCCCAGCCACCCTCGGGCCTCCTGCTCCACAGTGACAGAATTGCCGTTGTTGATGGTCAGTGAGG
AGGCAGAAGAGCAAGCCCACTCCACCCGCAGTACCTCATCTGCAAACCCTGGGAACTCAGTTCGGAGGAA
ATCGTGTATCGTGAAGGAGATGGAGAAAATGAAGAACAAGCGTGAAGAGAAGAGGGCCCAGAACTCGGAG
CTAAGAATAAAGCGAGCACAGGAATATGACAGCAGCTTTCCAAACTGGGAATTTGCCCGGATGATCAAAG
AATTTCGGGTTACTATGGAATGTAGCCCGCTTACTGTGACAGACCCTATCGAAGAGCACAGGATCTGTGT
CTGTGTCAGGAAACGCCCACTGAATAAACAAGAACTGGCCAAGAAAGAAATCGATGTGATTTCTGTTCCC
AGCAAGTGTCTCCTCCTGGTGCATGAACCCAAGTTAAAAGTGGACTTAACGAAGTACCTGGAGAACCAAG
CTTTCTGCTTTGACTTTGCATTTGATGAGACAGCTTCCAATGAAGTTGTCTACAGGTTCACAGCAAGGCC
ACTGGTACAGACGATTTTTGAAGGGGGAAAAGCAACATGCTTTGCCTATGGACAGACAGGCAGTGGGAAG
ACACATACAATGGGTGGAGATCTGTCTGGTAAAAGTCAGAACGCATCTAAAGGGATCTACGCCATGGCTT
CCCGGGATGTCTTCCTTCTGAAGAACCAGCCTCGGTACCGGAACTTAAACCTGGAAGTTTATGTGACATT
CTTCGAGATCTACAATGGGAAGGTGTTTGATCTGCTCAACAAAAAGGCCAAGTTACGTGTGCTGGAGGAC
AGCAGGCAGCAGGTGCAGGTTGTGGGACTGCAGGAGTACCTGGTCACCTGTGCTGATGATGTCATCAAGA
TGATCAACATGGGCAGTGCCTGCAGGACTTCTGGACAAACATTTGCCAACTCCAATTCCTCCCGCTCCCA
CGCCTGCTTCCAGATTCTTCTTCGAACTAAAGGGAGATTACATGGCAAATTCTCTTTGGTGGATCTGGCA
GGGAATGAACGAGGGGCCGACACATCTAGTGCTGACCGGCAGACTCGCATGGAGGGAGCAGAAATTAACA
AGTCTCTCCTGGCTCTGAAGGAGTGCATCCGGGCGCTGGGACAGAACAAGGCTCACACCCCGTTCCGTGA
GAGCAAGCTGACCCAGGTGCTGAGGGACTCGTTCATTGGGGAGAACTCGAGGACCTGCATGATCGCCATG
ATCTCACCAGGCATAAGCTCCTGTGAATACACCTTAAACACGCTGAGATACGCAGACAGAGTCAAGGAGC
TAAGCCCCCACAGCGGACCCAGTGGAGAGCAGCCGGTTCAGATGGAAACAGAAGTGATGGAAGCCAGCTC
TAATGGGACGTCTCTGACTGGCAATGAAGAGGAGGAGCTGTCTTCCCAGATGTCCAGCTTTAATGAAGCC
ATGACTCAGATCAGGGAGCTGGAAGAGAGGGCCCTGGAAGAGCTCAGAGAGATCATACAGCAAGGACCAA
ACTGGCTTGAGCTCTCCGAGATGACAGATCAGCCAGACTATGACTTGGAGACCTTTGTGAACAAAGCAGA
ATCTGCCCTGACACAGCAGGCTAAGCAGGCGAAGCACTTCTCAGCCCTTCGAGAAGTCATCAAGGCCCTG
CGCCTAGCCATGCAACTGGAAGAACAGGCTAGCAAACAAATAAACAGCAAGAAACGGCACCAATGA

Translation (721 aa):
MESLHARLFPGLSINIQRSNGLIHPANISTVNVEKSCVSVEWIEGGTTKGKEIDIDDVAAINPELLQLLP
LRPKDSLPLQENVTVPKQKRKSVNSKIPALKEGLRSRSTRMSTVSEVRIPAQENEMEVELPVPTNSRKQF
AIPSHPRASCSTVTELPLLMVSEEAEEQAHSTRSTSSANPGNSVRRKSCIVKEMEKMKNKREEKRAQNSE
LRIKRAQEYDSSFPNWEFARMIKEFRVTMECSPLTVTDPIEEHRICVCVRKRPLNKQELAKKEIDVISVP
SKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGK
THTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLLNKKAKLRVLED
SRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQILLRTKGRLHGKFSLVDLA
GNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIAM
ISPGISSCEYTLNTLRYADRVKELSPHSGPSGEQPVQMETEVMEASSNGTSLTGNEEEELSSQMSSFNEA
MTQIRELEERALEELREIIQQGPNWLELSEMTDQPDYDLETFVNKAESALTQQAKQAKHFSALREVIKAL
RLAMQLEEQASKQINSKKRHQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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