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Report for CCDS40314.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40314.1 Public Mus musculus 8 Unc5d 23 108 98 CCDS HistoryNCBI Gene:210801Re-query CCDS DB by CCDS ID:40314.1Re-query CCDS DB by GeneID:210801See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40314.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000168630.3 ENSMUSP00000128521.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000168630.3Link to Ensembl Protein Viewer:ENSMUSP00000128521.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000168630Re-query CCDS DB by Protein ID:ENSMUSP00000128521
Original member Current member NCBI NM_153135.3 NP_694775.1 Accepted alive Link to Nucleotide Sequence:NM_153135.3Link to Protein Sequence:NP_694775.1Re-query CCDS DB by Nucleotide ID:NM_153135Re-query CCDS DB by Protein ID:NP_694775Link to BLAST:NP_694775.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694775.1 956 Q8K1S2 956 100% 0 0

Chromosomal Locations for CCDS 40314.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 28652768 28652972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28666766 28666944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28675275 28675439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28683103 28683252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28694515 28694742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28696330 28696498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28715723 28715807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28719617 28719994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28724221 28724406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28725148 28725162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28741480 28741512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28758958 28759122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28760725 28760892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28761699 28761879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28844734 28844837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28875496 28875639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 28891292 28891510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 29219242 29219338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2871 nt):
ATGGGGACAGGGGCTGCAGACGGCAGCCGCGGGGCGCGCCGGTGGCTCCCATGGCTAGGACTCTTTTTCT
GGGCGGCGGGGGCTGCGGCTGCCCGAGGAGCCGATGGCAGTGAAATTCTTCCCGACTCTATCCCATCTGC
CCCTGGAACGCTGCCTCATTTCATCGAGGAGCCCGAAGATGCATACATCATCAAGAGCAACCCGATTGCA
CTCAGGTGCAAAGCAAGGCCAGCCATGCAGATCTTCTTCAAATGCAATGGGGAGTGGGTCCATCAGAATG
AACATGTGTCCGAGGAGAGCCTGGATGAGAGCTCAGGCTTGAAGGTCCGGGAAGTGTTTATCAATGTCAC
CAGGCAGCAAGTGGAGGACTTCCATGGGCCAGAGGACTACTGGTGCCAGTGTGTAGCGTGGAGCCACCTG
GGAACGTCCAAGAGTAGGAAGGCATCTGTGCGCATAGCCTATTTACGGAAAAACTTTGAACAAGATCCAC
AAGGCAGGGAGGTTCCTATTGAAGGCATGATCGTGCTGCATTGTCGCCCGCCAGAGGGAGTTCCAGCAGC
AGAGGTGGAATGGCTGAAAAATGAGGAGCCCATCGACTCCGAACAGGATGAGAACATTGACACCAGGGCT
GACCATAACTTGATCATCAGACAGGCCCGGCTGTCAGACTCAGGGAATTACACCTGTATGGCAGCCAACA
TCGTGGCCAAGAGGAGGAGCCTCTCAGCAACTGTGGTGGTCTACGTGAATGGAGGCTGGTCTTCCTGGAC
AGAGTGGTCAGCCTGCAATGTTCGCTGTGGTAGAGGATGGCAGAAACGTTCCCGGACCTGCACCAACCCC
GCTCCTCTCAATGGTGGGGCCTTTTGTGAGGGAATGTCAGTGCAGAAAATAACCTGCACTGCTCTTTGTC
CTGTGGATGGCAGCTGGGAAGTGTGGAGTGAATGGTCAGTCTGCAGCCCAGAGTGTGAACATCTTCGTAT
CCGTGAGTGCACAGCTCCACCCCCAAGAAATGGGGGCAAGTTCTGTGAAGGTCTCAGCCAGGAATCTGAA
AACTGCACAGATGGTCTCTGCATTCTAGATAAAAAACCTCTTCATGAAATAAAACCCCAAAGATGGAGTA
GGAGAGGCATTGAGAATGCCAGCGACATTGCTTTGTACTCCGGCTTGGGTGCAGCCGTGGTAGCTGTTGC
GGTCCTGGTCATTGGTGTCACCCTCTACAGACGGAGCCACAGTGACTACGGAGTGGATGTCATTGACTCT
TCTGCATTGACAGGTGGCTTCCAGACCTTCAACTTCAAAACAGTTCGTCAAGGAAATTCTCTACTACTGA
ATCCTGCCATGCAGCCAGATCTGACTGTGAGCCGGACATACAGCGGGCCCATCTGTCTGCAGGATCCGCT
CGACAAGGAGCTCATGACAGAGTCCTCACTCTTCAATCCTTTATCTGACATCAAAGTCAAAGTCCAGAGC
TCATTTATGGTTTCCCTGGGAGTGTCTGAGAGAGCGGAGTACCATGGCAAGAATCACTCGGGGACTTTCC
CCCATGGAAACAACCGCGGATTCAGTACAATACATCCCAGAAACAAAACGCCGTACATCCAAAATCTGTC
ATCACTGCCGACAAGGACAGAGCTGAGGACAACTGGTGTCTTTGGCCATTTAGGGGGACGCTTAGTAATG
CCAAATACAGGGGTGAGTCTACTCATACCACATGGTGCCATCCCAGAGGAGAATTCTTGGGAGATTTATA
TGTCAATCAACCAAGGTGAACCGAGCCTGCAGTCAGATGGATCTGAGGTTCTCCTGAGTCCTGAAGTCAC
CTGTGGGCCTCCAGATATGCTTGTCACAACTCCCTTTGCGCTGACCATCCCTCACTGTGCAGACGTCAGT
TCAGAGCACTGGAACATTCACCTGAAGAAGAGGACCCAGCAGGGGAAGTGGGAGGAAGTGATGTCAGTGG
AGGATGAGTCCACATCCTGTTACTGCCTCTTGGATCCCTTTGCCTGTCACGTGCTGCTTGATAGCTTTGG
AACGTATGCCCTCACAGGAGAGCCAATCACAGACTGTGCCGTAAAGCAGCTCAAGGTGGCTGTGTTTGGC
TGCATGTCCTGTAACTCCTTGGATTACAACCTGAGAGTTTACTGTGTGGACAATACTCCTTGTGCATTTC
AGGAAGTGATTTCTGACGAACGGCACCAAGGCGGCCAGCTCCTGGAAGAACCAAAGCTGCTGCATTTCAA
AGGGAATACATTCAGTCTCCAGGTCTCTGTCCTTGACATCCCTCCCTTCCTCTGGAGGATCAAACCGTTC
ACTGCATGCCAGGAAGTCCCCTTCTCCCGAGTGTGGAGCAGCAACCGGCAGCCCCTGCACTGTGCCTTCT
CCCTGGAGCGCTACACGCCCACCACCACCCAGCTGTCCTGCAAAATCTGCATTCGGCAGCTCAAAGGCCA
TGAACAGATCCTCCAAGTGCAGACATCCATCCTAGAGAGTGAACGAGAAACCATCACTTTCTTCGCACAA
GAGGACAGTACCTTTCCTGCACAGACTGGCCCAAAAGCCTTCAAAATTCCCTATTCCATCAGACAGAGGA
TCTGCGCCACGTTTGATACCCCAAATGCCAAAGGCAAGGACTGGCAGATGTTAGCACAGAAGAACAGCAT
CAATAGGAATTTATCATATTTCGCTACCCAAAGCAGCCCTTCCGCTGTCATTTTGAACCTCTGGGAAGCT
CGTCATCAGCAGGATGGGGACCTCGACTCGCTCGCCTGTGCCCTTGAGGAGATTGGGAGGACACACACGA
AACTATCCAACATCACAGAGCCACAGATTGATGATGCTGACTTCAACTACAGCAGGCAAAATGGACTCTA
G

Translation (956 aa):
MGTGAADGSRGARRWLPWLGLFFWAAGAAAARGADGSEILPDSIPSAPGTLPHFIEEPEDAYIIKSNPIA
LRCKARPAMQIFFKCNGEWVHQNEHVSEESLDESSGLKVREVFINVTRQQVEDFHGPEDYWCQCVAWSHL
GTSKSRKASVRIAYLRKNFEQDPQGREVPIEGMIVLHCRPPEGVPAAEVEWLKNEEPIDSEQDENIDTRA
DHNLIIRQARLSDSGNYTCMAANIVAKRRSLSATVVVYVNGGWSSWTEWSACNVRCGRGWQKRSRTCTNP
APLNGGAFCEGMSVQKITCTALCPVDGSWEVWSEWSVCSPECEHLRIRECTAPPPRNGGKFCEGLSQESE
NCTDGLCILDKKPLHEIKPQRWSRRGIENASDIALYSGLGAAVVAVAVLVIGVTLYRRSHSDYGVDVIDS
SALTGGFQTFNFKTVRQGNSLLLNPAMQPDLTVSRTYSGPICLQDPLDKELMTESSLFNPLSDIKVKVQS
SFMVSLGVSERAEYHGKNHSGTFPHGNNRGFSTIHPRNKTPYIQNLSSLPTRTELRTTGVFGHLGGRLVM
PNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSPEVTCGPPDMLVTTPFALTIPHCADVS
SEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLLDPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFG
CMSCNSLDYNLRVYCVDNTPCAFQEVISDERHQGGQLLEEPKLLHFKGNTFSLQVSVLDIPPFLWRIKPF
TACQEVPFSRVWSSNRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQ
EDSTFPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVILNLWEA
RHQQDGDLDSLACALEEIGRTHTKLSNITEPQIDDADFNYSRQNGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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