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Report for CCDS5815.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5815.1 Public Homo sapiens 7 KLHDC10 24 110 108 CCDS HistoryNCBI Gene:23008Re-query CCDS DB by CCDS ID:5815.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5815.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335420.10 ENSP00000334140.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335420.10Link to Ensembl Protein Viewer:ENSP00000334140.4Re-query CCDS DB by Nucleotide ID:ENST00000335420Re-query CCDS DB by Protein ID:ENSP00000334140
Original member Current member NCBI NM_014997.4 NP_055812.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014997.4Link to Protein Sequence:NP_055812.1Re-query CCDS DB by Nucleotide ID:NM_014997Re-query CCDS DB by Protein ID:NP_055812Link to BLAST:NP_055812.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055812.1 442 Q6PID8-1 442 100% 0 0

Chromosomal Locations for CCDS 5815.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 130070644 130070809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130096921 130097007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130116445 130116666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130120749 130120903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130122054 130122202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130124451 130124535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130125865 130125931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130127404 130127451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130129437 130129576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130130537 130130746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1329 nt):
ATGTCGGCCGCCCAGGGCTGGGACAGGAACCGCCGGAGGGGAGGAGGCGCCGCCGGCGCTGGTGGCGGAG
GTAGCGGGGCCGGCGGGGGCAGTGGGGGCAGCGGGGGTCGGGGGACTGGCCAGCTCAACCGCTTCGTGCA
ACTCTCCGGGCGGCCGCACCTGCCAGGTAAGAAGAAAATACGATGGGACCCAGTTAGGAGGCGCTTCATT
CAGTCCTGTCCCATCATAAGGATCCCTAACAGGTTTTTGAGAGGCCACAGACCTCCACCAGCACGAAGTG
GACATCGTTGTGTGGCAGATAATACCAACCTATATGTGTTTGGAGGTTATAACCCAGATTATGATGAATC
GGGAGGGCCTGATAATGAAGACTATCCTCTCTTCAGGGAACTCTGGAGGTATCATTTTGCTACAGGAGTA
TGGCACCAGATGGGCACAGATGGCTACATGCCCCGGGAATTGGCATCTATGTCACTTGTGCTGCATGGAA
ACAACCTGTTAGTATTTGGAGGTACGGGCATCCCATTTGGAGAGAGCAACGGCAATGACGTCCATGTGTG
TAATGTGAAGTATAAGAGATGGGCTTTGCTCAGCTGTCGGGGGAAGAAACCCAGTCGTATATATGGACAG
GCTATGGCCATCATCAATGGCTCCCTTTATGTCTTTGGAGGTACAACCGGCTATATTTACAGCACAGACC
TGCACAAGTTAGATCTCAATACCAGAGAGTGGACACAACTGAAACCAAACAACCTATCCTGTGATCTACC
AGAAGAGAGATACCGACATGAAATTGCACATGACGGGCAGAGGATTTACATCTTGGGAGGTGGTACTTCC
TGGACAGCATATTCCTTAAACAAGATCCATGCATACAACCTTGAAACGAATGCCTGGGAGGAAATTGCAA
CAAAACCCCATGAAAAAATAGGCTTTCCTGCAGCCCGAAGGTGTCACAGTTGTGTTCAAATAAAAAATGA
TGTATTTATTTGTGGGGGCTATAATGGAGAGGTGATCCTGGGAGATATCTGGAAGTTGAATCTGCAGACT
TTCCAATGGGTGAAGCTCCCAGCTACCATGCCAGAGCCAGTTTATTTTCACTGTGCAGCTGTTACACCAG
CTGGTTGCATGTACATTCATGGAGGAGTGGTGAACATCCATGAAAACAAACGGACTGGGTCATTGTTTAA
GATCTGGCTGGTGGTACCTAGCCTGCTGGAACTGGCATGGGAGAAGCTGCTTGCGGCCTTCCCTAACCTT
GCAAACCTCTCCCGAACACAACTTCTGCACCTTGGACTCACACAGGGACTCATCGAACGCTTGAAATGA

Translation (442 aa):
MSAAQGWDRNRRRGGGAAGAGGGGSGAGGGSGGSGGRGTGQLNRFVQLSGRPHLPGKKKIRWDPVRRRFI
QSCPIIRIPNRFLRGHRPPPARSGHRCVADNTNLYVFGGYNPDYDESGGPDNEDYPLFRELWRYHFATGV
WHQMGTDGYMPRELASMSLVLHGNNLLVFGGTGIPFGESNGNDVHVCNVKYKRWALLSCRGKKPSRIYGQ
AMAIINGSLYVFGGTTGYIYSTDLHKLDLNTREWTQLKPNNLSCDLPEERYRHEIAHDGQRIYILGGGTS
WTAYSLNKIHAYNLETNAWEEIATKPHEKIGFPAARRCHSCVQIKNDVFICGGYNGEVILGDIWKLNLQT
FQWVKLPATMPEPVYFHCAAVTPAGCMYIHGGVVNIHENKRTGSLFKIWLVVPSLLELAWEKLLAAFPNL
ANLSRTQLLHLGLTQGLIERLK


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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