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Report for CCDS19384.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19384.1 Public Mus musculus 5 Ugt2b36 23 108 98 CCDS HistoryNCBI Gene:231396Re-query CCDS DB by CCDS ID:19384.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 19384.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000094649.10 ENSMUSP00000092233.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000094649.10Link to Ensembl Protein Viewer:ENSMUSP00000092233.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000094649Re-query CCDS DB by Protein ID:ENSMUSP00000092233
Original member Current member NCBI NM_001029867.1 NP_001025038.1 Accepted alive Link to Nucleotide Sequence:NM_001029867.1Link to Protein Sequence:NP_001025038.1Re-query CCDS DB by Nucleotide ID:NM_001029867Re-query CCDS DB by Protein ID:NP_001025038Link to BLAST:NP_001025038.1

Chromosomal Locations for CCDS 19384.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 87066191 87066470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87080870 87081089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87081510 87081597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87089418 87089549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87090838 87090986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 87091801 87092524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1593 nt):
ATGCTTTGGAAGTGGATTTCTGCTCTGCTGCTGCTGCAGATAAGTTGCTGCTTCAGATCTGCAAAGTGTG
GGAAGGTGTTGGTATGGCCGGTGGACTACAGTCACTGGATGAATATAAAGATAATACTGGATGAACTTAA
ACAGAAGGGCCATGAAGTCACTGTTTTGAGACCTTCAACTTCCATTTTTCTTGATCCCAAAAAATCGCCT
GGCCTTAAGTTTGAAACTTTTCCTACATCTTTCAGTAATGATGTCATGGAAATTATTTTTGCAAAGGCTG
TGGAAAGATGGACTTATGAGGTTCCAAGAGATACATGTTTATCATATTCTCCTTTATTACAAAATATATT
TGATGAATATTCTGATTACTGTTTAACTCTTTGCAAAGACACAGTTTCAAACAAACAGCTCATGGCAAAA
CTCCAGGAATCCAAGTTTGATGTCATTTTGTCAGATGCTATTGGTCCCTGTGGGGAGCTCATAGCTGAAC
TGCTCCAAATTCCTTTTCTATATAGTCTTCGCTTCTCTCCTGGCTACTATCTTGAAAAATACAGTGGAGG
ACTCCCTCTCCCTCCCTCTTATGTACCTGTAATTTTGTCAGGATTAAGTGGTCAAATGACATTCAAAGAG
AGGGTAAAGAATATGATATGTATGCTTTATTTTGACTTTTGGTTCCAGACATTTAGGGAGAAGAAATGGG
ATCAGTTTTACAGCGAAACTTTGGGAAGGCCAACCACCTTAATTGAGACAATGGGCAAAGCAGAAATGTG
GCTCATTAGATCCTATTGGGATTTGGAGTTTCCTCACCCAACCTTACCAAATGTTTACTATGTTGGAGGA
GTCCATTGCAAACCTGCTAAACCATTGCCTAAGGAAATGGAAGACTTTGTTCAGAGCTCTGGAGAGCATG
GTGTGGTGGTGTTTTCTCTGGGGTCAATGGTCAGTAATATGACAGAAGAAAAGGCCAATGCAATTGCATG
GGCTCTTGCCCAGATTCCACAAAAGGTTCTTTGGAGATTTGACGGCAAAACTCCAGCCACCTTAGGACCC
AATACCAGAATCTACAAGTGGCTTCCCCAAAATGATCTTCTTGGTCATCCAAAAACCAAAGCCTTTATAA
CTCATGGTGGCGCGAATGGACTCTACGAGGCGATCCATCATGGAATCCCTATGATTGGCATTCCTTTGTT
TGGAGAACAACATGATAACATTGCTCACATGGTGGCCAAAGGAGCAGCTGTTACATTGAATATCAGAACG
ATGTCAAGGTCAGATTTGCTCAATGCACTGGAGGAAGTCATAGACAATCCTTTCTATAAAGAGAATGCTA
TGTGGTTGTCAACCATTCACCATGACCAGCCTATGAAGCCCCTGGACAGAGCAGTCTTCTGGATTGAGTT
TGTCATGCGCCACAAAGGGGCCAAGCATCTGAGACCACTTGCATACAACCTCACCTGGTACCAGTACCAC
TCTCTGGATGTGATTGGATTCCTGCTTGCTTTTGTGACATTCATTGTAGCCCTCATTGTAAAGTGCTTCT
TGTTTGTTTACCGATTCTTTGTAAAGAAAGAAAAGAAAATGAAGAATGAGTAG

Translation (530 aa):
MLWKWISALLLLQISCCFRSAKCGKVLVWPVDYSHWMNIKIILDELKQKGHEVTVLRPSTSIFLDPKKSP
GLKFETFPTSFSNDVMEIIFAKAVERWTYEVPRDTCLSYSPLLQNIFDEYSDYCLTLCKDTVSNKQLMAK
LQESKFDVILSDAIGPCGELIAELLQIPFLYSLRFSPGYYLEKYSGGLPLPPSYVPVILSGLSGQMTFKE
RVKNMICMLYFDFWFQTFREKKWDQFYSETLGRPTTLIETMGKAEMWLIRSYWDLEFPHPTLPNVYYVGG
VHCKPAKPLPKEMEDFVQSSGEHGVVVFSLGSMVSNMTEEKANAIAWALAQIPQKVLWRFDGKTPATLGP
NTRIYKWLPQNDLLGHPKTKAFITHGGANGLYEAIHHGIPMIGIPLFGEQHDNIAHMVAKGAAVTLNIRT
MSRSDLLNALEEVIDNPFYKENAMWLSTIHHDQPMKPLDRAVFWIEFVMRHKGAKHLRPLAYNLTWYQYH
SLDVIGFLLAFVTFIVALIVKCFLFVYRFFVKKEKKMKNE


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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