NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32308.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32308.1 Public Homo sapiens 15 MESD 24 110 108 CCDS HistoryNCBI Gene:23184Re-query CCDS DB by CCDS ID:32308.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32308.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261758.6 ENSP00000261758.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261758.6Link to Ensembl Protein Viewer:ENSP00000261758.4Re-query CCDS DB by Nucleotide ID:ENST00000261758Re-query CCDS DB by Protein ID:ENSP00000261758
Original member Current member EBI ENST00000561312.5 ENSP00000453430.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000561312.5Link to Ensembl Protein Viewer:ENSP00000453430.1Re-query CCDS DB by Nucleotide ID:ENST00000561312Re-query CCDS DB by Protein ID:ENSP00000453430
Original member Current member EBI ENST00000619987.4 ENSP00000482455.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000619987.4Link to Ensembl Protein Viewer:ENSP00000482455.1Re-query CCDS DB by Nucleotide ID:ENST00000619987Re-query CCDS DB by Protein ID:ENSP00000482455
Original member Current member NCBI NM_015154.3 NP_055969.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015154.3Link to Protein Sequence:NP_055969.1Re-query CCDS DB by Nucleotide ID:NM_015154Re-query CCDS DB by Protein ID:NP_055969Link to BLAST:NP_055969.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055969.1 234 Q14696-1 234 100% 0 0

Chromosomal Locations for CCDS 32308.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 80979219 80979477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80981950 80982182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80989579 80989791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (705 nt):
ATGGCGGCTTCCAGGTGGGCGCGCAAGGCCGTGGTCCTGCTTTGTGCCTCTGACCTGCTGCTGCTGCTGC
TACTGCTACCACCGCCTGGGTCCTGCGCGGCCGAAGGCTCGCCCGGGACGCCCGACGAGTCTACCCCACC
TCCCCGGAAGAAGAAGAAGGATATTCGCGATTACAATGATGCAGACATGGCGCGTCTTCTGGAGCAATGG
GAGAAAGATGATGACATTGAAGAAGGAGATCTTCCAGAGCACAAGAGACCTTCAGCACCTGTCGACTTCT
CAAAGATAGACCCAAGCAAGCCTGAAAGCATATTGAAAATGACGAAAAAAGGGAAGACTCTCATGATGTT
TGTCACTGTATCAGGAAGCCCTACTGAGAAGGAGACAGAGGAAATTACGAGCCTCTGGCAGGGCAGCCTT
TTCAATGCCAACTATGACGTCCAGAGGTTCATTGTGGGATCAGACCGTGCTATCTTCATGCTTCGCGATG
GGAGCTACGCCTGGGAGATCAAGGACTTTTTGGTCGGTCAAGACAGGTGTGCTGATGTAACTCTGGAGGG
CCAGGTGTACCCCGGCAAAGGAGGAGGAAGCAAAGAGAAAAATAAAACAAAGCAAGACAAGGGCAAAAAA
AAGAAGGAAGGAGATCTGAAATCTCGGTCTTCCAAGGAAGAAAATCGAGCTGGGAATAAAAGAGAAGACC
TGTGA

Translation (234 aa):
MAASRWARKAVVLLCASDLLLLLLLLPPPGSCAAEGSPGTPDESTPPPRKKKKDIRDYNDADMARLLEQW
EKDDDIEEGDLPEHKRPSAPVDFSKIDPSKPESILKMTKKGKTLMMFVTVSGSPTEKETEEITSLWQGSL
FNANYDVQRFIVGSDRAIFMLRDGSYAWEIKDFLVGQDRCADVTLEGQVYPGKGGGSKEKNKTKQDKGKK
KKEGDLKSRSSKEENRAGNKREDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH