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Report for CCDS4798.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4798.1 Public Homo sapiens 6 ANKS1A 24 110 108 CCDS HistoryNCBI Gene:23294Re-query CCDS DB by CCDS ID:4798.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4798.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360359.5 ENSP00000353518.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360359.5Link to Ensembl Protein Viewer:ENSP00000353518.3Re-query CCDS DB by Nucleotide ID:ENST00000360359Re-query CCDS DB by Protein ID:ENSP00000353518
Original member Current member NCBI NM_015245.3 NP_056060.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015245.3Link to Protein Sequence:NP_056060.2Re-query CCDS DB by Nucleotide ID:NM_015245Re-query CCDS DB by Protein ID:NP_056060Link to BLAST:NP_056060.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056060.2 1134 Q92625-1 1134 100% 0 0

Chromosomal Locations for CCDS 4798.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 34889403 34889599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34967239 34967319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34970010 34970166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34981690 34981986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34982752 34982827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34983113 34983214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34983324 34983425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34985082 34985278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34989224 34989316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 34994302 34994422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35017473 35018059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35054099 35054165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35060147 35060253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35078558 35078656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35079516 35079668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35079821 35079928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35080994 35081158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35082691 35082816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35083155 35083226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35083417 35083503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35084121 35084258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35085766 35085936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35086952 35087049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35088606 35088609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3405 nt):
ATGGGGAAGGAGCAGGAGCTGCTGGAGGCGGCCCGCACCGGGCACCTCCCGGCGGTGGAGAAGCTGCTGT
CCGGGAAGCGGCTCTCCTCAGGCTTTGGGGGCGGCGGCGGCGGTGGCTCTGGGGGCGGCGGCGGCGGCAG
CGGCGGCGGCGGCGGCGGCCTCGGCTCTTCCAGCCACCCCCTCTCCAGTCTGCTCAGCATGTGGAGAGGG
CCAAATGTGAACTGTGTTGACAGCACTGGCTACACACCCCTGCACCATGCTGCTTTGAATGGCCATAAGG
ATGTGGTCGAGGTTCTTCTGAGGAACGATGCGCTGACCAACGTGGCTGACTCAAAAGGCTGCTACCCTCT
GCATTTGGCAGCCTGGAAAGGAGATGCCCAGATAGTGCGGTTGCTCATCCATCAAGGGCCTTCACACACC
AGAGTCAATGAACAGAACAATGACAACGAGACAGCCCTGCATTGTGCAGCGCAGTATGGCCACACAGAGG
TGGTGAAGGTGCTCTTAGAGGAGCTGACGGACCCCACCATGCGCAACAACAAATTCGAGACCCCTTTGGA
CCTGGCAGCACTGTACGGGCGACTGGAGGTGGTGAAAATGCTCCTTAATGCACACCCCAACCTCCTGAGC
TGCAACACTAAGAAGCACACCCCTCTGCACTTGGCAGCAAGGAATGGCCACAAAGCCGTGGTCCAGGTCC
TCCTCGATGCTGGCATGGACAGCAACTACCAGACGGAGATGGGCAGTGCTTTGCATGAGGCTGCTTTGTT
TGGCAAGACCGATGTGGTGCAAATCCTGCTGGCTGCAGGAACTGACGTCAACATAAAAGATAACCATGGA
CTGACTGCCCTAGACACTGTTCGGGAACTGCCTTCTCAAAAGAGCCAGCAAATAGCAGCATTAATTGAAG
ATCACATGACTGGAAAAAGAAGTACAAAAGAAGTAGATAAAACCCCCCCACCCCAGCCACCTCTCATCTC
CAGTATGGACTCCATATCACAGAAGTCTCAGGGTGACGTGGAGAAAGCAGTGACTGAACTGATTATAGAT
TTTGATGCAAATGCTGAAGAAGAGGGTCCCTACGAAGCTCTGTATAATGCCATCTCCTGCCATTCGTTGG
ACAGCATGGCCAGCGGGCGATCATCTGACCAAGACTCCACGAACAAGGAGGCTGAGGCAGCAGGAGTGAA
ACCTGCTGGAGTGAGGCCTAGGGAACGTCCACCACCTCCAGCAAAGCCACCGCCCGATGAAGAGGAAGAA
GACCACATAGATAAGAAGTATTTTCCCTTGACAGCTTCTGAGGTTCTGTCCATGAGACCTAGGATTCATG
GGAGTGCAGCCCGGGAAGAAGACGAACACCCTTATGAACTGTTGTTAACAGCAGAGACAAAGAAAGTGGT
GTTGGTGGATGGAAAAACAAAAGACCACAGGCGGAGCAGCAGCAGCCGGAGCCAGGACTCTGCGGAGGGG
CAGGACGGGCAGGTCCCAGAGCAGTTCTCAGGCCTCCTCCACGGCTCCTCCCCGGTGTGCGAGGTGGGGC
AGGACCCTTTCCAGCTGCTCTGTACCGCTGGCCAGAGCCATCCAGACGGGTCCCCCCAGCAGGGCGCCTG
CCACAAGGCCAGCATGCAGCTGGAGGAGACGGGTGTGCATGCTCCTGGAGCCTCCCAGCCCAGTGCCCTG
GACCAGAGCAAGAGAGTGGGCTACCTCACAGGCCTGCCCACCACCAACAGCCGCTCGCACCCTGAAACTT
TGACTCACACAGCATCTCCGCACCCTGGTGGTGCTGAGGAAGGAGACCGGAGTGGGGCCAGGAGCCGAGC
GCCTCCCACTAGCAAACCCAAAGCTGAACTCAAACTCAGCCGCAGCTTGTCCAAGTCTGACTCTGATCTC
CTGACCTGCTCACCCACAGAGGACGCTACCATGGGGAGTCGGAGTGAGTCCTTATCCAACTGCAGCATTG
GGAAGAAAAGGCTAGAGAAGTCACCCTCCTTCGCCTCGGAGTGGGATGAGATTGAGAAAATCATGAGTTC
TATTGGAGAAGGGATTGACTTTTCTCAGGAACGGCAGAAGATCTCAGGTTTACGGACGCTGGAGCAGAGT
GTCGGGGAGTGGCTGGAGTCGATTGGGCTGCAGCAGTATGAGAGCAAGTTGCTTCTGAATGGCTTTGACG
ATGTCCACTTCCTGGGGTCTAATGTGATGGAAGAGCAGGACCTGCGGGACATCGGCATCAGCGACCCACA
GCACCGGCGGAAGCTGCTCCAGGCGGCACGCTCCCTACCCAAGGTGAAGGCTCTGGGTTATGACGGGAAC
AGCCCCCCTAGCGTGCCCTCCTGGCTGGACTCCCTGGGGCTGCAGGACTACGTCCATTCCTTCTTGTCAA
GTGGTTACAGCTCCATTGACACCGTGAAGAACCTCTGGGAGCTAGAGCTCGTCAATGTCCTGAAGGTCCA
GCTGCTCGGCCATCGCAAGCGCATCATCGCCTCCCTCGCAGACAGACCGTACGAGGAGCCGCCCCAGAAG
CCCCCCAGATTCTCCCAGCTGAGGTGCCAAGATTTGCTCTCCCAGACGTCATCCCCACTGAGTCAGAATG
ATTCCTGCACTGGGCGGTCGGCAGATCTGCTGCTGCCTCCAGGGGACACAGGCAGGAGGCGCCATGACAG
TCTCCATGACCCTGCGGCACCCTCCCGAGCGGAGCGCTTCAGGATCCAGGAGGAGCACCGTGAGGCCAAG
CTGACCCTGCGGCCCCCGAGCCTGGCAGCCCCCTACGCCCCAGTGCAGAGTTGGCAACACCAGCCAGAGA
AACTCATCTTCGAGTCCTGTGGTTATGAAGCCAATTATCTGGGCTCCATGCTGATCAAAGATCTGCGAGG
GACAGAATCCACGCAAGACGCCTGTGCCAAGATGCGGAAATCTACGGAGCACATGAAGAAGATCCCCACC
ATCATCCTGTCCATCACATACAAAGGTGTCAAGTTCATCGATGCCTCCAACAAGAACGTCATTGCAGAGC
ACGAGATCCGGAACATTTCCTGTGCGGCCCAGGACCCGGAGGACCTCTGTACCTTTGCCTACATCACCAA
GGACCTGCAGACCAGCCACCACTATTGCCATGTGTTCAGCACCGTGGATGTGAACCTGACCTACGAGATC
ATCCTGACGCTGGGGCAGGCCTTCGAAGTGGCCTATCAGTTGGCCCTGCAGGCCCAGAAGTCCAGGGCGA
CGGGCGCCTCTGCAGCTGAGATGATTGAAACAAAATCTTCCAAACCGGTGCCTAAGCCTCGGGTCGGCGT
GAGGAAATCCGCACTGGAACCACCTGATATGGACCAAGATGCCCAATCCCATGCCAGTGTCTCCTGGGTT
GTGGACCCCAAACCAGACTCTAAGCGGAGCCTCAGCACCAACTGA

Translation (1134 aa):
MGKEQELLEAARTGHLPAVEKLLSGKRLSSGFGGGGGGGSGGGGGGSGGGGGGLGSSSHPLSSLLSMWRG
PNVNCVDSTGYTPLHHAALNGHKDVVEVLLRNDALTNVADSKGCYPLHLAAWKGDAQIVRLLIHQGPSHT
RVNEQNNDNETALHCAAQYGHTEVVKVLLEELTDPTMRNNKFETPLDLAALYGRLEVVKMLLNAHPNLLS
CNTKKHTPLHLAARNGHKAVVQVLLDAGMDSNYQTEMGSALHEAALFGKTDVVQILLAAGTDVNIKDNHG
LTALDTVRELPSQKSQQIAALIEDHMTGKRSTKEVDKTPPPQPPLISSMDSISQKSQGDVEKAVTELIID
FDANAEEEGPYEALYNAISCHSLDSMASGRSSDQDSTNKEAEAAGVKPAGVRPRERPPPPAKPPPDEEEE
DHIDKKYFPLTASEVLSMRPRIHGSAAREEDEHPYELLLTAETKKVVLVDGKTKDHRRSSSSRSQDSAEG
QDGQVPEQFSGLLHGSSPVCEVGQDPFQLLCTAGQSHPDGSPQQGACHKASMQLEETGVHAPGASQPSAL
DQSKRVGYLTGLPTTNSRSHPETLTHTASPHPGGAEEGDRSGARSRAPPTSKPKAELKLSRSLSKSDSDL
LTCSPTEDATMGSRSESLSNCSIGKKRLEKSPSFASEWDEIEKIMSSIGEGIDFSQERQKISGLRTLEQS
VGEWLESIGLQQYESKLLLNGFDDVHFLGSNVMEEQDLRDIGISDPQHRRKLLQAARSLPKVKALGYDGN
SPPSVPSWLDSLGLQDYVHSFLSSGYSSIDTVKNLWELELVNVLKVQLLGHRKRIIASLADRPYEEPPQK
PPRFSQLRCQDLLSQTSSPLSQNDSCTGRSADLLLPPGDTGRRRHDSLHDPAAPSRAERFRIQEEHREAK
LTLRPPSLAAPYAPVQSWQHQPEKLIFESCGYEANYLGSMLIKDLRGTESTQDACAKMRKSTEHMKKIPT
IILSITYKGVKFIDASNKNVIAEHEIRNISCAAQDPEDLCTFAYITKDLQTSHHYCHVFSTVDVNLTYEI
ILTLGQAFEVAYQLALQAQKSRATGASAAEMIETKSSKPVPKPRVGVRKSALEPPDMDQDAQSHASVSWV
VDPKPDSKRSLSTN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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