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Report for CCDS20937.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20937.1 Public Mus musculus 7 Vmn1r180 23 108 98 CCDS HistoryNCBI Gene:232962Re-query CCDS DB by CCDS ID:20937.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20937.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000173816.4 ENSMUSP00000134362.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000173816.4Link to Ensembl Protein Viewer:ENSMUSP00000134362.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000173816Re-query CCDS DB by Protein ID:ENSMUSP00000134362
Original member Current member NCBI NM_206869.2 NP_996752.2 Accepted alive Link to Nucleotide Sequence:NM_206869.2Link to Protein Sequence:NP_996752.2Re-query CCDS DB by Nucleotide ID:NM_206869Re-query CCDS DB by Protein ID:NP_996752Link to BLAST:NP_996752.2

Chromosomal Locations for CCDS 20937.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 23952414 23953331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGTCTGCTCATGAAAAATTCCTGAAAAACACTGAAGAAGTGGCTCTTCAGATCCTCTTGCTCTGCCAGT
TTGGGGTTGGGACTGTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTATCCAGTCTTGACTGGTTCTCA
ACAGAGGCCCAGACAGGTGATTTTAAGCCACATGGCTGTGGCCAATATCTTGATTCTCTTCATCACTACA
TTTCAAAACAACATGATGGCTTTTGCTTCAAAAAATCCTCCAACTGACCTCAAATGTAAATTGGAATTCT
TTATTCGCCTGGTGGCAAGAAGCACAAACTTGTGTTCCACCTGTGTCCTGAGTATCCATCAGTTTGTCAC
TCTTGTTCCTGTTAATAGAGGTAAACTCATACTCAGAGCAAGTGTCCCAAATTTGGCAAGTTATTCTTGT
TACAGTTGTTGGTTCTTCAGTGTCTTAAATAACATCTACATTCCAATTAAGCTCACTGGTCCACAGATAA
CAGACAATAATAATGACTCTAAAAGCAAGTTGTTTTGTTCCACTTCTGGATTCAGTGTAGGCATTGTCTT
CTTGCGATTTGCCCATGATGCCACATTCATGAGCATCATGGTCTGGACCAGTGTCTCCATGGTACTTCTC
CTCCGTAGACATCAACAGCAAATGCAGCACATCCTCACTCCCAATCAGGATGCCAGAGGCCAAGCTGAGA
CCAGAGCAACCCATACTATCCTGATGCTGGTTGTCACATTTGTTAGCTTTCATCTTCTAAATTTTATTTG
TACCATCTTTCACATGTTTTTTGTAGATTCTTATCTCTTTGTGAGGCATTGCAGTGAAGTTTTTGTTGCA
GGCTTCCCCACAATATCTCCTTTACTGTTGATCTTCAGAGACCCTAAGAATCCTTGTTCTATGCTCTTCA
ACTGTTAA

Translation (305 aa):
MSAHEKFLKNTEEVALQILLLCQFGVGTVANVFLFVHNFYPVLTGSQQRPRQVILSHMAVANILILFITT
FQNNMMAFASKNPPTDLKCKLEFFIRLVARSTNLCSTCVLSIHQFVTLVPVNRGKLILRASVPNLASYSC
YSCWFFSVLNNIYIPIKLTGPQITDNNNDSKSKLFCSTSGFSVGIVFLRFAHDATFMSIMVWTSVSMVLL
LRRHQQQMQHILTPNQDARGQAETRATHTILMLVVTFVSFHLLNFICTIFHMFFVDSYLFVRHCSEVFVA
GFPTISPLLLIFRDPKNPCSMLFNC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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