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Report for CCDS52156.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52156.1 Public Mus musculus 7 Cyp2a22 23 108 98 CCDS HistoryNCBI Gene:233005Re-query CCDS DB by CCDS ID:52156.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52156.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000170227.2 ENSMUSP00000128030.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000170227.2Link to Ensembl Protein Viewer:ENSMUSP00000128030.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000170227Re-query CCDS DB by Protein ID:ENSMUSP00000128030
Original member NCBI NM_001101467.1 NP_001094937.1 Updated not alive Link to Nucleotide Sequence:NM_001101467.1Link to Protein Sequence:NP_001094937.1Re-query CCDS DB by Nucleotide ID:NM_001101467Re-query CCDS DB by Protein ID:NP_001094937
Current member NCBI NM_001101467.2 NP_001094937.1 Accepted alive Link to Nucleotide Sequence:NM_001101467.2Link to Protein Sequence:NP_001094937.1Re-query CCDS DB by Nucleotide ID:NM_001101467Re-query CCDS DB by Protein ID:NP_001094937Link to BLAST:NP_001094937.1

Chromosomal Locations for CCDS 52156.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 26932351 26932532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26933479 26933620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26934129 26934316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26934761 26934899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26936309 26936485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26937707 26937867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26938079 26938228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26938740 26938902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26939183 26939359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1479 nt):
ATGCTGGGCTCAGGGCTGCTCCTCGTAGCCATACTGGCCTTCCTGAGTGTGATGGTCTTGGTGTCTGTCT
GGCAGCAGAAAATCAGGGGGAAGTTGCCCCCAGGACCCATTCCTTTGCCTTTCATTGGAAATTACCTGCA
ACTGAATAGAAAAGATGTATACAGCTCCATCACACAGCTCCAAGAGCACTATGGCCCTGTGTTCACCATC
CACCTTGGGCCTCGCCGGGTTGTGGTGCTATATGGATACGATGCAGTCAAAGAGGCTTTGGAGGACAACG
CTGAGGAGTTCAGTGGACGAGGCGAACAGGCCACCTTTAATACACTCTTCAAAGGCTATGGTGTGACATT
CAGCAATGGGGAACGAGCCAAACAACTCAGACGCTTCTCCATAGCCACACTGAAGGATTTCGGCTTGGGC
AAGCGAGGTATGGAGGAGCGCATCCAGGAGGAGGCAGGCTGTTTGATCAAGATGTTGCAGGGCACTTGTG
GAGCCCCCATTGACCCCACCATGTACCTGAGCAAAACAGTCTCCAATGTCATTAGCTCCATTGTCTTCGG
GGACCGCTTCAACTACGAGGACAAAGAGTTCCTGTCACTGCTGCAGATGATGAGTCAAATGAACCAATTT
GCTGCTTCACCCACAGGTCAGCTCTATGACATGTTCCATTCAGTGATGAAGTACCTGCCCGGACCACAGC
AACAGATCATCAAGGATTCTCATAAACTGGAAGACTTCATGATACAGAAAGTGAAGCACAACCACAGTAC
CCTGGACCCCAATTCCCCACGAGGCTTCATTGACTCCTTTCTCATCCACATGCAAAAGGAGAAAAATTTT
AATTCAGAGTTTCACATGAAGAACCTAGTGATGACATCATTGAACCTCTTCTTTGCTGGGTCTGAGACAG
TCAGCTCCTTACTACGATATGGCTTCCTGCTACTAATGAAGCATCCAGATGTGGAGGCCAAGGTCCATGA
GGAGATTGACCGAGTGATTGGCAGGAACCGACAGCCCCAATATGAGGACCATATGAAGATGCCCTACACC
CAGGCTGTGATCCATGAGATCCAGAGATTTTCTAACTTTGCTCCCTTGGGCATTCCTCGAAGGATTACCA
AGGATACTTCCTTCCGTGGCTTCTTCCTCCCCAAGGGCACTGATGTGTTCCCTATAATGGGTTCTCTGAT
GATAGATCCAAAGTTCTTCTCTAGCCCCAAAGACTTCAACCCACAGCACTTCCTGGATGACAAGGGACAG
TTGAAGAAGATCCCTGCTTTTCTGCCCTTTTCCATTGGGAAGCGATCCTGTTTGGGATACAGCCTGGGTA
AGATGCAGCTGTTCCTGTTCTTCACCACCATCTTGCAGAACTTCCGATTCAAATTTCCAAGGAAACTAGA
AGATATCAATGAGTCCCCCAAACCAGAGGGGTTTACCAGGATCATACCAAAGTACACCATGAGCTTCGTG
CCCATCTGA

Translation (492 aa):
MLGSGLLLVAILAFLSVMVLVSVWQQKIRGKLPPGPIPLPFIGNYLQLNRKDVYSSITQLQEHYGPVFTI
HLGPRRVVVLYGYDAVKEALEDNAEEFSGRGEQATFNTLFKGYGVTFSNGERAKQLRRFSIATLKDFGLG
KRGMEERIQEEAGCLIKMLQGTCGAPIDPTMYLSKTVSNVISSIVFGDRFNYEDKEFLSLLQMMSQMNQF
AASPTGQLYDMFHSVMKYLPGPQQQIIKDSHKLEDFMIQKVKHNHSTLDPNSPRGFIDSFLIHMQKEKNF
NSEFHMKNLVMTSLNLFFAGSETVSSLLRYGFLLLMKHPDVEAKVHEEIDRVIGRNRQPQYEDHMKMPYT
QAVIHEIQRFSNFAPLGIPRRITKDTSFRGFFLPKGTDVFPIMGSLMIDPKFFSSPKDFNPQHFLDDKGQ
LKKIPAFLPFSIGKRSCLGYSLGKMQLFLFFTTILQNFRFKFPRKLEDINESPKPEGFTRIIPKYTMSFV
PI


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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