NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS52257.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52257.1 Public Mus musculus 7 Mrgprb1 23 108 98 CCDS HistoryNCBI Gene:233231Re-query CCDS DB by CCDS ID:52257.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52257.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000094384.3 ENSMUSP00000091946.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000094384.3Link to Ensembl Protein Viewer:ENSMUSP00000091946.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000094384Re-query CCDS DB by Protein ID:ENSMUSP00000091946
Original member Current member NCBI NM_205810.4 NP_991379.3 Accepted alive Link to Nucleotide Sequence:NM_205810.4Link to Protein Sequence:NP_991379.3Re-query CCDS DB by Nucleotide ID:NM_205810Re-query CCDS DB by Protein ID:NP_991379Link to BLAST:NP_991379.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_991379.3 350 Q3UG61 350 100% 0 0

Chromosomal Locations for CCDS 52257.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 48447110 48448151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 48456197 48456207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1053 nt):
ATGGAGCAAAGAACTGAGATTGCACCACTCCTGAAAATGGACTTAGTCATCCAAGACTGGACCATTAATA
TTACAGCACTGAAAGAAAGCAATGACAATGGAATATCATTTTGTGAAGTTGTGTCTCGTACCATGACTTT
TCTTTCCCTCATCATTGCCTTAGTTGGGCTGGTTGGAAATGCCACAGTGTTATGGTTTCTGGGCTTCCAG
ATGAGCAGGAATGCCTTCTCTGTCTACATCCTCAACCTTGCTGGTGCTGACTTTGTCTTCATGTGCTTTC
AAATTGTACATTGTTTTTATATTATCTTAGACATCTACTTCATCCCCACTAATTTTTTTTCATCTTACAC
TATGGTGTTAAACATTGCTTACCTTAGTGGTCTGAGCATCCTCACTGTCATTAGCACTGAACGCTTCCTA
TCTGTCATGTGGCCCATCTGGTACCGCTGCCAACGCCCAAGGCACACATCAGCTGTCATATGTACTGTGC
TTTGGGTCTTGTCCCTGGTGTTGAGCCTCCTGGAAGGAAAGGAATGTGGCTTCCTATATTACACTAGTGG
CCCTGGTTTGTGTAAGACATTTGATTTAATCACTACTGCATGGTTAATTGTTTTATTTGTGGTTCTCTTG
GGATCCAGTCTGGCCTTGGTGCTTACCATCTTCTGTGGCTTACACAAGGTTCCTGTGACCAGGTTGTATG
TGACCATTGTGTTTACAGTGCTTGTCTTCCTGATCTTTGGTCTGCCCTATGGGATCTACTGGTTCCTCTT
AGAGTGGATTAGGGAATTTCATGATAATAAACCTTGTGGTTTTCGTAACGTGACAATATTTCTGTCCTGT
ATTAACAGCTGTGCCAACCCCATCATTTACTTCCTTGTTGGCTCCATTAGGCACCATCGGTTTCAACGGA
AGACTCTCAAGCTTCTTCTGCAGAGAGCCATGCAAGACTCTCCTGAGGAGGAAGAATGTGGAGAGATGGG
TTCCTCAAGAAGACCTAGAGAAATAAAAACTGTCTGGAAGGGACTGAGAGCTGCTTTGATCAGGCATAAA
TAG

Translation (350 aa):
MEQRTEIAPLLKMDLVIQDWTINITALKESNDNGISFCEVVSRTMTFLSLIIALVGLVGNATVLWFLGFQ
MSRNAFSVYILNLAGADFVFMCFQIVHCFYIILDIYFIPTNFFSSYTMVLNIAYLSGLSILTVISTERFL
SVMWPIWYRCQRPRHTSAVICTVLWVLSLVLSLLEGKECGFLYYTSGPGLCKTFDLITTAWLIVLFVVLL
GSSLALVLTIFCGLHKVPVTRLYVTIVFTVLVFLIFGLPYGIYWFLLEWIREFHDNKPCGFRNVTIFLSC
INSCANPIIYFLVGSIRHHRFQRKTLKLLLQRAMQDSPEEEECGEMGSSRRPREIKTVWKGLRAALIRHK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH