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Report for CCDS14199.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14199.1 Public Homo sapiens X KLHL34 24 110 108 CCDS HistoryNCBI Gene:257240Re-query CCDS DB by CCDS ID:14199.1Re-query CCDS DB by GeneID:257240See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14199.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379499.3 ENSP00000368813.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000379499.3Link to Ensembl Protein Viewer:ENSP00000368813.2Re-query CCDS DB by Nucleotide ID:ENST00000379499Re-query CCDS DB by Protein ID:ENSP00000368813
Original member Current member NCBI NM_153270.3 NP_695002.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153270.3Link to Protein Sequence:NP_695002.1Re-query CCDS DB by Nucleotide ID:NM_153270Re-query CCDS DB by Protein ID:NP_695002Link to BLAST:NP_695002.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_695002.1 644 Q8N239 644 100% 0 0

Chromosomal Locations for CCDS 14199.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 21655854 21657788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1935 nt):
ATGAGTTACTTCCTGTCTTACTGCAAAGCTCATGGCGGCGCGCTGCTCACCGGCTACCAGGCCCTGCGCG
CCGAGGGCTTCCTGTGCGACGTGACACTGGAGACCGAGGGCAGCGAATTCCCGGCGCACAGGTCGCTCCT
GGCGTGCTCCAGTGACTACTTCAGGGCCCTGTTCAAGAGCCACACCCAGGAATCCCGGGCGCGCGTGATC
CACCTGCACGTGCCATCGGCAGCCGGCCTGCAGCGCCTGCTGGACTTCATCTACACTGCCTGGCTGTCGC
TTTCCATGGACACTGTAGAGGACACTCTGGAGGCCGCCAGCTACCTGCAGGTCACTGAGGCCCTGGGGCT
CTGTGGGCGCTACTTGGAGCGCCAGCTGGCTCCAGAGAACTGCTGCTTCGCCGCCAACGTGGCAGCGCGC
TTTGGCCTGGCTCACACGCTGGACGCGGCCGAGCGCTGCATCGTGAGCCACTTGCAGGAGCTGCTGGCGC
GGGGCGCGGGCCCCGCGGGACTCCTGGAGCTCAACCCTACATCGCTGAGGGCTGTACTGGGTGCCCCCGA
CGTGGCGCGGGTGCCCGAGGCCCGGCTACTGGGCCTGGCGTTAGCTTGGTTGCGGCAGGAGCCCACAACT
GAGCGCCTGGCACACTGTACAGAGTTGCTGGAGCGTGTCCGCTTTGGCCTGGTTCCCGCCGACGTACTGC
GGCGCGTGTACTCGGGCTCTGGCCTCGTGCTGCCCGCCCGGGTCAAGGGCCTCATCATCCAGGCCCTCAA
CTACCACACGACGCCCTCCCGCCAGCCGCTCATGCAGGGCGAGCAGACCAGCATCCGGAGCCCCCAGACC
CGCATCTTGTTGGTGGGGGGGCGCAGGGCACGGGAGGTGGTGATTGAGGAGGTCGCGGCCCCGCAGAGGG
CAGCTAGGGGCCAGGTCGCCGCCCCAGAGCCCGAGGAAGAAGAGGAAGAGTTGGAGGAAGAGGAGGAGGA
GGAGGAGTGGGAGCTCACCCAGAACGTGGTGGCCTTCGATGTGTACAATCACCGCTGGCGCAGCCTTACG
CAGCTACCCACACCACTGCTGGGGCACAGCGTGTGCACCGCGGGCAACTTCCTGTTTGTCCTGGGTGGGG
AGAGCCCTTCCGGCAGTGCATCCTCTCCCCTGGCCGACGACTCGCGGGTGGTCACGGCCCAAGTGCACCG
TTACGACCCGCGCTTCCACGCTTGGACGGAAGTGCCCGCCATGCGGGAAGCGCGGGCCCACTTCTGGTGC
GGCGCGGTGGGCGAGAGGCTCCTGGCCGTCGGGGGCCTGGGTGCGGGCGGTGAGGTGCTGGCCTCGGTGG
AGATGTACGACCTGCGTCGGGACCGCTGGACGGCGGCTGGGGCACTACCGCGGGCTCTGCACGGTCACGC
GGGGGCCGTCGGGGACCGCGGTGTTGTGTACATCTCGGGGGGCAAGGCAGGGAGAGGCGAGGGCGGAGCG
AGCAGCCTCCGGGACTTATACGTCCTGGGCCCTGAGGAGCAGGTTTGGAGCAAGAAGGCACCCATGGGCA
CCGCACGTTTCGGGCACCACATGGCAGTGCTGCGCGGCGCTGTGTTTGCTTTTCTGGGGCGATACGAGCC
CTTCTCTGAGATCGAGCGCTACGACCCCGGCGCCGACCAGTGGACTCGGTTGCGGCCGCTGCCCTACGAC
CGCTTCTGCTATGGGCTGGCCGTGGTCGAGGAGACAGCGTTGCTGCTGGGCGGCCTCAAGTGGCGGGACT
CGCGCCAGGTGCCTACCCGCAACGTAGTGGGCTACGACCTCGACCTGGACCGTTGGGAGGACATCGGCTG
CGCGTTGCCCTGGGCCTGGAGCGGCCTGCGGTGCGCAGTGCTGCAGCTGGCCGAGGGTGGGGACGACGAG
AGGGAGGGAGAGGTTGGAGAGGCGCTAGATTTGGTGCTGGGCTGA

Translation (644 aa):
MSYFLSYCKAHGGALLTGYQALRAEGFLCDVTLETEGSEFPAHRSLLACSSDYFRALFKSHTQESRARVI
HLHVPSAAGLQRLLDFIYTAWLSLSMDTVEDTLEAASYLQVTEALGLCGRYLERQLAPENCCFAANVAAR
FGLAHTLDAAERCIVSHLQELLARGAGPAGLLELNPTSLRAVLGAPDVARVPEARLLGLALAWLRQEPTT
ERLAHCTELLERVRFGLVPADVLRRVYSGSGLVLPARVKGLIIQALNYHTTPSRQPLMQGEQTSIRSPQT
RILLVGGRRAREVVIEEVAAPQRAARGQVAAPEPEEEEEELEEEEEEEEWELTQNVVAFDVYNHRWRSLT
QLPTPLLGHSVCTAGNFLFVLGGESPSGSASSPLADDSRVVTAQVHRYDPRFHAWTEVPAMREARAHFWC
GAVGERLLAVGGLGAGGEVLASVEMYDLRRDRWTAAGALPRALHGHAGAVGDRGVVYISGGKAGRGEGGA
SSLRDLYVLGPEEQVWSKKAPMGTARFGHHMAVLRGAVFAFLGRYEPFSEIERYDPGADQWTRLRPLPYD
RFCYGLAVVEETALLLGGLKWRDSRQVPTRNVVGYDLDLDRWEDIGCALPWAWSGLRCAVLQLAEGGDDE
REGEVGEALDLVLG


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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