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Report for CCDS21296.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21296.2 Public Mus musculus 7 Mrgpra2b 23 108 98 CCDS HistoryNCBI Gene:235712Re-query CCDS DB by CCDS ID:21296.2See the combined annotation on chromosome 7 in Sequence Viewer

Public Note for CCDS 21296.2
The coding region has been updated to extend the N-terminus to one that is more supported by available conservation data.

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 21296.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000119798.2 ENSMUSP00000113310.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000119798.2Link to Ensembl Protein Viewer:ENSMUSP00000113310.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000119798Re-query CCDS DB by Protein ID:ENSMUSP00000113310
Original member Current member NCBI NM_153101.3 NP_694741.2 Accepted alive Link to Nucleotide Sequence:NM_153101.3Link to Protein Sequence:NP_694741.2Re-query CCDS DB by Nucleotide ID:NM_153101Re-query CCDS DB by Protein ID:NP_694741Link to BLAST:NP_694741.2

Chromosomal Locations for CCDS 21296.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 47463987 47464971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47489488 47489498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (996 nt):
ATGGGGGAAAGCAATGGTGAAGCATTTCTTGCCTTTAAGACCTCAGCCTCACCAACAGCACCAGTGACAA
CAAATCCAATGGACGAAACCCTCCCTGGAAGTATCAACATTAGGATTCTGATCCCAAAATTGATGATCAT
CATCTTCGGACTGGTCGGACTGATGGGAAACGCCATTGTGTTCTGGCTCCTGGGCTTCCACTTGCGCAGG
AATGCCTTCTCAGTCTACATCCTAAACTTGGCCCTGGCTGACTTCCTTTTCCTCCTCAGTAGTATCATAG
CTTCCACCCTGTTTCTTCTCAAAGTTTCCTACCTCAGCATCATCTTTCACTTGTGCTTTAACACCATTAT
GATGGTTGTCTACATCACAGGGATAAGCATGCTCAGTGCCATCAGCACTGAGTGCTGCCTGTCTGTCCTG
TGCCCCACCTGGTATCGCTGCCACCGTCCAGTACATACATCAACTGTCATGTGTGCTGTGATCTGGGTCC
TATCCCTGTTGATCTGCATTCTGAATAGCTATTTCTGTGCTGTCTTACATACCAGATATGATAATGACAA
TGAGTGTCTGGCAACTAACATCTTTACCGCCTCGTACATGATATTTTTGCTTGTGGTCCTCTGTCTGTCC
AGCCTGGCTCTGCTGGCCAGGTTGTTCTGTGGCGCTGGGCAGATGAAGCTTACCAGATTTCATGTGACCA
TCTTGCTGACCCTTTTGGTTTTTCTCCTCTGCGGGTTGCCCTTTGTCATCTACTGCATCCTGTTATTCAA
GATTAAGGATGATTTCCATGTATTAGATGTTAATCTTTATCTAGCATTAGAAGTCCTGACTGCTATTAAC
AGCTGTGCCAACCCCATCATCTACTTCTTCGTGGGCTCTTTCAGACATCAGTTGAAGCACCAGACCCTCA
AAATGGTTCTCCAGAGTGCACTGCAGGACACTCCTGAGACAGCTGAAAACATGGTAGAGATGTCAAGTAA
CAAAGCAGAGCCTTGA

Translation (331 aa):
MGESNGEAFLAFKTSASPTAPVTTNPMDETLPGSINIRILIPKLMIIIFGLVGLMGNAIVFWLLGFHLRR
NAFSVYILNLALADFLFLLSSIIASTLFLLKVSYLSIIFHLCFNTIMMVVYITGISMLSAISTECCLSVL
CPTWYRCHRPVHTSTVMCAVIWVLSLLICILNSYFCAVLHTRYDNDNECLATNIFTASYMIFLLVVLCLS
SLALLARLFCGAGQMKLTRFHVTILLTLLVFLLCGLPFVIYCILLFKIKDDFHVLDVNLYLALEVLTAIN
SCANPIIYFFVGSFRHQLKHQTLKMVLQSALQDTPETAENMVEMSSNKAEP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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