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Report for CCDS6007.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6007.1 Public Homo sapiens 8 NAT1 24 110 108 CCDS HistoryNCBI Gene:9Re-query CCDS DB by CCDS ID:6007.1Re-query CCDS DB by GeneID:9See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6007.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307719.9 ENSP00000307218.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307719.9Link to Ensembl Protein Viewer:ENSP00000307218.4Re-query CCDS DB by Nucleotide ID:ENST00000307719Re-query CCDS DB by Protein ID:ENSP00000307218
Original member Current member EBI ENST00000518029.5 ENSP00000428270.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000518029.5Link to Ensembl Protein Viewer:ENSP00000428270.1Re-query CCDS DB by Nucleotide ID:ENST00000518029Re-query CCDS DB by Protein ID:ENSP00000428270
Original member Current member EBI ENST00000520546.1 ENSP00000429341.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000520546.1Link to Ensembl Protein Viewer:ENSP00000429341.1Re-query CCDS DB by Nucleotide ID:ENST00000520546Re-query CCDS DB by Protein ID:ENSP00000429341
Original member Current member EBI ENST00000517492.5 ENSP00000429407.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000517492.5Link to Ensembl Protein Viewer:ENSP00000429407.1Re-query CCDS DB by Nucleotide ID:ENST00000517492Re-query CCDS DB by Protein ID:ENSP00000429407
Original member Current member NCBI NM_000662.8 NP_000653.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000662.8Link to Protein Sequence:NP_000653.3Re-query CCDS DB by Nucleotide ID:NM_000662Re-query CCDS DB by Protein ID:NP_000653Link to BLAST:NP_000653.3
Original member Current member NCBI NM_001160170.4 NP_001153642.1 Accepted alive Link to Nucleotide Sequence:NM_001160170.4Link to Protein Sequence:NP_001153642.1Re-query CCDS DB by Nucleotide ID:NM_001160170Re-query CCDS DB by Protein ID:NP_001153642Link to BLAST:NP_001153642.1
Original member Current member NCBI NM_001160171.4 NP_001153643.1 Accepted alive Link to Nucleotide Sequence:NM_001160171.4Link to Protein Sequence:NP_001153643.1Re-query CCDS DB by Nucleotide ID:NM_001160171Re-query CCDS DB by Protein ID:NP_001153643Link to BLAST:NP_001153643.1
Original member Current member NCBI NM_001160172.4 NP_001153644.1 Accepted alive Link to Nucleotide Sequence:NM_001160172.4Link to Protein Sequence:NP_001153644.1Re-query CCDS DB by Nucleotide ID:NM_001160172Re-query CCDS DB by Protein ID:NP_001153644Link to BLAST:NP_001153644.1
Original member Current member NCBI NM_001160173.4 NP_001153645.1 Accepted alive Link to Nucleotide Sequence:NM_001160173.4Link to Protein Sequence:NP_001153645.1Re-query CCDS DB by Nucleotide ID:NM_001160173Re-query CCDS DB by Protein ID:NP_001153645Link to BLAST:NP_001153645.1
Original member Current member NCBI NM_001160174.3 NP_001153646.1 Accepted alive Link to Nucleotide Sequence:NM_001160174.3Link to Protein Sequence:NP_001153646.1Re-query CCDS DB by Nucleotide ID:NM_001160174Re-query CCDS DB by Protein ID:NP_001153646Link to BLAST:NP_001153646.1
Original member Current member NCBI NM_001160179.3 NP_001153651.1 Accepted alive Link to Nucleotide Sequence:NM_001160179.3Link to Protein Sequence:NP_001153651.1Re-query CCDS DB by Nucleotide ID:NM_001160179Re-query CCDS DB by Protein ID:NP_001153651Link to BLAST:NP_001153651.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000653.3 290 P18440 290 100% 0 0
NP_001153642.1 290 P18440 290 100% 0 0
NP_001153643.1 290 P18440 290 100% 0 0
NP_001153644.1 290 P18440 290 100% 0 0
NP_001153645.1 290 P18440 290 100% 0 0
NP_001153646.1 290 P18440 290 100% 0 0
NP_001153651.1 290 P18440 290 100% 0 0

Chromosomal Locations for CCDS 6007.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 18222048 18222920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (873 nt):
ATGGACATTGAAGCATATCTTGAAAGAATTGGCTATAAGAAGTCTAGGAACAAATTGGACTTGGAAACAT
TAACTGACATTCTTCAACACCAGATCCGAGCTGTTCCCTTTGAGAACCTTAACATCCATTGTGGGGATGC
CATGGACTTAGGCTTAGAGGCCATTTTTGATCAAGTTGTGAGAAGAAATCGGGGTGGATGGTGTCTCCAG
GTCAATCATCTTCTGTACTGGGCTCTGACCACTATTGGTTTTGAGACCACGATGTTGGGAGGGTATGTTT
ACAGCACTCCAGCCAAAAAATACAGCACTGGCATGATTCACCTTCTCCTGCAGGTGACCATTGATGGCAG
GAACTACATTGTCGATGCTGGGTTTGGACGCTCATACCAGATGTGGCAGCCTCTGGAGTTAATTTCTGGG
AAGGATCAGCCTCAGGTGCCTTGTGTCTTCCGTTTGACGGAAGAGAATGGATTCTGGTATCTAGACCAAA
TCAGAAGGGAACAGTACATTCCAAATGAAGAATTTCTTCATTCTGATCTCCTAGAAGACAGCAAATACCG
AAAAATCTACTCCTTTACTCTTAAGCCTCGAACAATTGAAGATTTTGAGTCTATGAATACATACCTGCAG
ACATCTCCATCATCTGTGTTTACTAGTAAATCATTTTGTTCCTTGCAGACCCCAGATGGGGTTCACTGTT
TGGTGGGCTTCACCCTCACCCATAGGAGATTCAATTATAAGGACAATACAGATCTAATAGAGTTCAAGAC
TCTGAGTGAGGAAGAAATAGAAAAAGTGCTGAAAAATATATTTAATATTTCCTTGCAGAGAAAGCTTGTG
CCCAAACATGGTGATAGATTTTTTACTATTTAG

Translation (290 aa):
MDIEAYLERIGYKKSRNKLDLETLTDILQHQIRAVPFENLNIHCGDAMDLGLEAIFDQVVRRNRGGWCLQ
VNHLLYWALTTIGFETTMLGGYVYSTPAKKYSTGMIHLLLQVTIDGRNYIVDAGFGRSYQMWQPLELISG
KDQPQVPCVFRLTEENGFWYLDQIRREQYIPNEEFLHSDLLEDSKYRKIYSFTLKPRTIEDFESMNTYLQ
TSPSSVFTSKSFCSLQTPDGVHCLVGFTLTHRRFNYKDNTDLIEFKTLSEEEIEKVLKNIFNISLQRKLV
PKHGDRFFTI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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