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Report for CCDS49092.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49092.1 Public Mus musculus 12 Akap5 23 108 98 CCDS HistoryNCBI Gene:238276Re-query CCDS DB by CCDS ID:49092.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 49092.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000154078.2 ENSMUSP00000114495.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000154078.2Link to Ensembl Protein Viewer:ENSMUSP00000114495.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000154078Re-query CCDS DB by Protein ID:ENSMUSP00000114495
Original member Current member NCBI NM_001101471.1 NP_001094941.1 Accepted alive Link to Nucleotide Sequence:NM_001101471.1Link to Protein Sequence:NP_001094941.1Re-query CCDS DB by Nucleotide ID:NM_001101471Re-query CCDS DB by Protein ID:NP_001094941Link to BLAST:NP_001094941.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001094941.1 745 D3YVF0 745 100% 0 0

Chromosomal Locations for CCDS 49092.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 76327817 76330054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2238 nt):
ATGGAGACCAGCGTTTCTGAGATTCAGGTAGAGACGAAGGACGAGAAGGGACCAGTAGCAGCCAGTCCTC
AGAAAGAGAGGCAGGAGAGAAAAACAGCCACACTCTGCTTCAAGAGAAGGAAGAAAGCGAACAAGACAAA
ACCCAAAGCCGGTTCCAGGACTGCTGAGGAGACAAAGAAACATACCCCCGAAGCTGGGGGCTCTGGTCAA
CGGCAACCAGCGGGTGCCTGGGCCTCCATCAAAGGCCTTGTGACACACAGGAAAAGGTCCGAGCCTGCAA
AGAAGCAGAAGCCGCCTGAGGCAGAGGTGCAGCCCGAGGATGGGGCTCTTCCTAAGAAAAAGGCAAAATC
CAGACTTAAGTTTCCTTGCCTAAGATTCTCAAGAGGGGCAAAGAGAAGTCGTCATTCCAAACTCACAGAA
GATTCAGGCTACGTCAGAGTCCAGGGAGAGGCAGACGATTTGGAGATAAAAGCCCAGACCCAGCCAGATG
ACCAGGCAATCCAGGCTGGGTCTACCCAGGGCCTACAGGAAGGTGTGTTGGTGAGAGATGGTAAGAAGAG
CCAAGAATCACACATAAGCAACAGCGTCACCTCGGGAGAGAATGTGATCGCCATAGAACTGGAATTAGAA
AACAAATCTTCTGCTATCCAGATGGGAACTCCTGAGCTGGAAAAGGAGACTAAGGTGATCACGGAAAAGC
CAAGTGTGCAGACGCAGCGAGCAAGTCTACTTGAGAGTTCAGCAGCAGGCAGCCCTCGGTCAGTGACTTC
TGCTGCTCCTCCATCACCAGCAACCACACATCAACATAGTCTGGAAGAACCCAGTAATGGCATCCGGGAA
AGTGCCCCAAGTGGGAAAGATGACAGGAGAAAGACTGCTGCTGAAGAAAAGAAATCAGGAGAGACTGCAC
TGGGCCAGGCAGAGGAAGCTGCAGTTGGCCAGGCAGACAAAAGGGCACTAAGCCAGGCCGGAGAAGCTAC
AGCGGGCCACCCAGAGGAAGCTACTGTGATCCAGGCAGAGAGTCAGGCAAAGGAAGGGAAACTGAGCCAG
GCAGAGGAAACTACAGTGGCCCAGGCAAAGGAAACTGTATTGAGTCAGGCAAAGGAAGGTGAACTGAGCC
AGGCAAAGAAAGCTACAGTTGGCCAGGCAGAGGAAGCTACAATTGACCACACAGAGAAAGTCACAGTGGA
TCAGGCAGAGGAAACCACAGTGGGTCAGGCAGAAGAAGCTACAGTTGGTCAGGCAGGGGAAGCTATATTG
AGCCAAGCAAAGGAAGCTACAGTTGTTGGTCAGGCAGAGGAAGCTACAGTTGATCGGGCAGAGGAAGCTA
CTGTTGGTCAGGCAGAGGAAGCTACAGTTGGCCACACAGAGAAAGTCACAGTGGATCAGGCAGAGGAAGC
CACGGTGGGTCAGGCAGAGGAAGCTACTGTTGGTCAGGCAGAGGAAGCTACAGTTGATTGGGCAGAAAAA
CCCACAGTTGGTCAGGCAGAGGAAGCCACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGCCACACAGAGA
AAGTCACAGTGGATCAGGCAGAGGAAGCAACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGCCACACAGA
GAAAGTCACAGTGGATCATGCAGAGGAAGCCACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGACAGGCA
GAGAAAGTCACAGTGGATCATGCAGAGGAAGCCACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGACAGG
CAGAGAAAGTCACAGTGGATCATGCAGAGGAAGCCACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGACA
GGCAGAGAAAGTCACAGTGGATCAGGCAGAGGAACCCACAGTGGATCAGGCTGAGGAAGCTATATCGAGC
CATGCACCAGATCTGAAAGAAAATGGAATTGATACAGAGAAACCGAGATCAGAAGAAAGCAAACGAATGG
AGCCAATTGCTATTATCATTACTGACACTGAAATCAGTGAATTTGATGTTAAGAAGTCTAAAAATGTTCC
TAAGCAATTCCTAATTTCAATGGAAAACGAGCAAGTGGGGGTTTTTGCTAATGATAGTGATTTCGAGGGG
AGAACTTCAGAACAGTATGAAACACTCTTAATAGAAACAGCATCTTCTCTCGTCAAGAATGCTATCGAGT
TGTCTGTAGAACAGCTGGTTAATGAAATGGTTTCCGAGGATAATCAAATAAATACGCTGTTCCAGTGA

Translation (745 aa):
METSVSEIQVETKDEKGPVAASPQKERQERKTATLCFKRRKKANKTKPKAGSRTAEETKKHTPEAGGSGQ
RQPAGAWASIKGLVTHRKRSEPAKKQKPPEAEVQPEDGALPKKKAKSRLKFPCLRFSRGAKRSRHSKLTE
DSGYVRVQGEADDLEIKAQTQPDDQAIQAGSTQGLQEGVLVRDGKKSQESHISNSVTSGENVIAIELELE
NKSSAIQMGTPELEKETKVITEKPSVQTQRASLLESSAAGSPRSVTSAAPPSPATTHQHSLEEPSNGIRE
SAPSGKDDRRKTAAEEKKSGETALGQAEEAAVGQADKRALSQAGEATAGHPEEATVIQAESQAKEGKLSQ
AEETTVAQAKETVLSQAKEGELSQAKKATVGQAEEATIDHTEKVTVDQAEETTVGQAEEATVGQAGEAIL
SQAKEATVVGQAEEATVDRAEEATVGQAEEATVGHTEKVTVDQAEEATVGQAEEATVGQAEEATVDWAEK
PTVGQAEEATVGQAEEATVGHTEKVTVDQAEEATVGQAEEATVGHTEKVTVDHAEEATVGQAEEATVGQA
EKVTVDHAEEATVGQAEEATVGQAEKVTVDHAEEATVGQAEEATVGQAEKVTVDQAEEPTVDQAEEAISS
HAPDLKENGIDTEKPRSEESKRMEPIAIIITDTEISEFDVKKSKNVPKQFLISMENEQVGVFANDSDFEG
RTSEQYETLLIETASSLVKNAIELSVEQLVNEMVSEDNQINTLFQ


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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