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Report for CCDS51282.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
51282.1 |
Public |
Mus musculus |
4 |
Kdm4a |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 51282.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000097911.8 |
ENSMUSP00000095524.2 |
Accepted |
alive |
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EBI |
ENSMUST00000106403.7 |
ENSMUSP00000102011.1 |
Accepted |
alive |
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EBI |
ENSMUST00000106406.8 |
ENSMUSP00000102014.2 |
Accepted |
alive |
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NCBI |
NM_001161823.1 |
NP_001155295.1 |
Updated |
not alive |
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NCBI |
NM_001161823.2 |
NP_001155295.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001155295.1 |
1064 |
Q8BW72-1 |
1064 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 51282.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3195 nt): ATGGCTTCTGAATCAGAAACTTTGAACCCCAGTGCTCGGATCATGACCTTTTACCCCACCATGGAAGAGT TCCGGAACTTCAGCCGCTACATTGCCTACATTGAATCCCAAGGAGCTCATCGGGCTGGGCTAGCCAAGGT CGTTCCTCCCAAAGAGTGGAAGCCTCGAACATCCTACGACGATATTGATGATCTAGTCATCCCTGCGCCC ATCCAGCAGCTGGTGACTGGCCAGTCTGGCCTCTTCACTCAGTACAACATACAGAAGAAAGCCATGACCG TTCGTGAGTTCCGCAAGATCGCCAATAGCGACAAGTACTGCACCCCGCGATACAGTGAATTTGAAGAACT TGAGCGTAAATACTGGAAAAACCTCACATTCAATCCTCCCATCTATGGAGCAGACGTGAATGGTACTCTC TATGAACAGCACGTTGATGAGTGGAATATCGGCCGGCTGAAGACCATCCTGGACCTGGTGGAGAAGGAGA GCGGGATCACCATTGAGGGGGTGAACACCCCCTACCTTTACTTCGGCATGTGGAAGACGTCCTTCGCCTG GCACACGGAAGACATGGATCTATACAGCATCAACTATCTGCACTTCGGAGAGCCAAAGTCTTGGTACTCT GTTCCACCTGAGCATGGGAAACGCCTGGAGCGTCTTGCCAAAGGCTTTTTCCCAGGAAGTGCTCAAAGCT GTGAGGCTTTTCTCCGCCACAAGATGACCCTGATCTCCCCATTAATGCTGAAGAAGTATGGCATTCCCTT TGACAAGGTGACCCAAGAAGCTGGCGAGTTTATGATCACTTTTCCGTATGGTTACCATGCTGGCTTCAAC CATGGCTTCAACTGTGCAGAGTCAACCAATTTTGCTACCCGTCGGTGGATTGAGTATGGCAAGCAGGCTG TGCTGTGCTCCTGCAGAAAAGATATGGTGAAGATCTCCATGGACGTGTTCGTGAGGAGGTTCCAGCCGGA ACGCTACAAACTTTGGAAAGCTGGGAAGGACAGCATGGTTATTGACCACACTCTGCCCACACCGGAAGCA GCCGAGTTCCTGAAGGACAGCGGCGGACTAACCCCGAGAGCAGGGAGTGAGGAGTGCCCAGAGGAGGACG TGGAAGCAGCGGATCAGGGAGAGGAGGGGGATGTGAAGAGAAGCCTGGCCAAGCATCGGATCGGGACAAA GAGACACAGAGTCTGTCTGGAAATACCCCAGGAGGTCAGTCAGAGCGAGCTCTTCCCCAAGGAAGAGCTA AGTTCTGGACAGTATGAGATGACAGAGTGCCCGGCCACCCTCGCCCCAGTGAGGCCCACCCACAGCTCCG TGCGGCAAGTTGAGGACAGTCTTCCCTTCCCAGATTACTCTGACCCCACTGAAGTCAAATTTGAAGAGCT GAAGAATGTCAAACTAGAAGAGGAAGATGAGGAGGATGAGCCCGAAGCAGCCGCACTGGACCTTTCTGTG AATCCTGCGTCTGTAGGAGGACGCCTCGTCTTCTCGGGTTCCAAAAAGAAATCATCTTCCAGCCTGGGCT CCACTTCATCTCAGGATTCAGTTTCTTCAGATTCTGAAACCGCCGAGTCTGTCTCTTGCCAGGGCCAAGA GAAAACGGGAGTTCTCACCGTGCACAGCTATGCCAGAGGGGACGGCAAGGCTGCCACAGGAGAGCCGAGT GTGAAGAAGAAGCGCAGTGCTCCCCGCAGCATCAGCGAGCAGGAGCTGGCAGAGGTTGCAGATGAGTACA TGCTTTCCCTGGAGGAGAATAAGAAGACCAAGGGTCGCCGCCAGCCCTTGAGCAAGCTCCCACGCCACCA CCCACTCGTGCTGCAGGAGTGCGGCAGCGATGACGAGACTTCTGAGCAGCTGACCCCCGAGGAGGAGGCT GAGGAGACAGAGGCTTGGGCCAAGCCTCTGAGCCAGCTGTGGCAGAACCGACCCCCGAACTTTGAGGCTG AAAAGGAATTCAATGAGATCATGGCCCAACAGGCCCCTCACTGTGCTGTGTGTATGATCTTCCAGACCTA CCATCAGGTGGAATTTGGAGCCTTCAGTCAGAGCTGTGGGGATGCTTCAGAGCCGGCTGCCCAGACTCAG AGGACCAAGCCACTGATCCCCGAAATGTGCTTTACCACCACTGGCTGCAGCACAGACATCAATCTGTCCA CCCCGTACCTAGAGGAGGATGGCACCAGCATGCTAGTGTCCTGCAAGAAGTGCAGTGTCCGGGTCCACGC CAGTTGCTATGGCGTCCCTCCTGCCAAGGCTTCTGAAGAATGGATGTGCTCTCGATGTTCAGCCAATGCC CTGGAGGAAGACTGCTGCTTATGCTCGTTGCGTGGAGGGGCCCTGCAGAGAGCCAATGACGACAGATGGG TTCATGTTTCATGTGCAGTGGCAATTCTAGAAGCAAGGTTTGTCAACATTGCTGAAAGAAGTCCAGTGGA TGTGAGCAAAATCCCTCTGCCCCGCTTCAAACTGAAGTGTGTTTTTTGTAAGAAGCGGAGAAAACGGAAT GCTGGCTGCTGTGTGCAGTGCTCCCATGGCCGCTGCCCCACTGCCTTCCATGTGAGCTGTGCCCAGGCTG CTGGGGTGATGATGCAACCCGACGACTGGCCCTTTGTTGTCTTCATCACGTGCTTCCGTCACAAGATTCC CAATCTGGAGCGTGCTAAGGGAGCCTTGCTGAGCATCACGGCGGGCCAGAAGGTTATCAGCAAACACAAG AACGGGCGCTTCTACCAGTGTGAGGTGGTCAGACTCACCACCGAGACCTTCTACGAAGTCAACTTTGACG ACGGCTCCTTCAGTGACAACCTTTATCCTGAGGACATAGTGAGTCAGGACTGTCTCCAACTGGGGCCTCC TGCTGAAGGTGAAGTGGTTCAAGTCAGATGGACAGATGGCCAAGTCTATGGGGCTAAGTTTGTGGCCTCC CACCCCATCCAGATGTACCAGGTGGAGTTTGAGGATGGCTCGCAGCTGGTGGTTAAGAGAGATGATGTAT ACACACTCGATGAAGAGCTTCCCAAGAGAGTCAAGTCTAGACTGTCGGTGGCTTCAGACATGCGCTTCAA TGAGATTTTCACAGAGAAGGAAGTGAAGCAAGAAAAGAAGAGGCAACGGGTCATCAACTCGCGGTACCGG GAGGATTACATCGAGCCAGCGCTGTACCGGGCCATCATGGAGTAG
Translation (1064 aa): MASESETLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRTSYDDIDDLVIPAP IQQLVTGQSGLFTQYNIQKKAMTVREFRKIANSDKYCTPRYSEFEELERKYWKNLTFNPPIYGADVNGTL YEQHVDEWNIGRLKTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYS VPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFN HGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRRFQPERYKLWKAGKDSMVIDHTLPTPEA AEFLKDSGGLTPRAGSEECPEEDVEAADQGEEGDVKRSLAKHRIGTKRHRVCLEIPQEVSQSELFPKEEL SSGQYEMTECPATLAPVRPTHSSVRQVEDSLPFPDYSDPTEVKFEELKNVKLEEEDEEDEPEAAALDLSV NPASVGGRLVFSGSKKKSSSSLGSTSSQDSVSSDSETAESVSCQGQEKTGVLTVHSYARGDGKAATGEPS VKKKRSAPRSISEQELAEVADEYMLSLEENKKTKGRRQPLSKLPRHHPLVLQECGSDDETSEQLTPEEEA EETEAWAKPLSQLWQNRPPNFEAEKEFNEIMAQQAPHCAVCMIFQTYHQVEFGAFSQSCGDASEPAAQTQ RTKPLIPEMCFTTTGCSTDINLSTPYLEEDGTSMLVSCKKCSVRVHASCYGVPPAKASEEWMCSRCSANA LEEDCCLCSLRGGALQRANDDRWVHVSCAVAILEARFVNIAERSPVDVSKIPLPRFKLKCVFCKKRRKRN AGCCVQCSHGRCPTAFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPNLERAKGALLSITAGQKVISKHK NGRFYQCEVVRLTTETFYEVNFDDGSFSDNLYPEDIVSQDCLQLGPPAEGEVVQVRWTDGQVYGAKFVAS HPIQMYQVEFEDGSQLVVKRDDVYTLDEELPKRVKSRLSVASDMRFNEIFTEKEVKQEKKRQRVINSRYR EDYIEPALYRAIME
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